>GRHL2_MOUSE (Q8K5C0) Grainyhead-like protein 2 homolog (Brother of mammalian|
           grainyhead) (Transcription factor CP2-like 3)
          Length = 625

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +3

Query: 168 QASDVLHKVKLSLKSMSFAPEASEEVPPLDLNELLAYFLKQSGPLFDQLGIKRDVCDKLV 347
           + S VL K         F P  S+++   ++  +L Y  K++  +FD L +K      L+
Sbjct: 505 EGSSVLVKRMFRPMEEEFGPTPSKQIKEENVKRVLLYVRKENDDVFDALMLKSPTVKGLM 564

Query: 348 ESLCSK 365
           E+L  K
Sbjct: 565 EALSEK 570

>DPO3_MYCPU (P47729) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1435

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 32/130 (24%), Positives = 56/130 (43%)
 Frame = +3

Query: 147  LDRKRQDQASDVLHKVKLSLKSMSFAPEASEEVPPLDLNELLAYFLKQSGPLFDQLGIKR 326
            LD K+  + +  L K   ++   +F    +++VP +DLN    Y  K    +    G K 
Sbjct: 922  LDDKKCPKCNSFLDKDGQTIPFETFLGFKADKVPDIDLNFSGEYQGKIHDEVKRLFGSKH 981

Query: 327  DVCDKLVESLCSKRKDHFVYDPLSTSESSSFRNDNTCDELDLRIASVLQSTGHHYEGGFW 506
                  + ++  K    ++   L T  +S   +DN  D L  +   V ++TG H  GG  
Sbjct: 982  TFRAGTISTVAEKTAYGYIKKYLET--ASLDYSDNFVDFLTEKSTGVKRTTGQH-PGGII 1038

Query: 507  DDGQKYDVAD 536
               +++DV D
Sbjct: 1039 IIPKEFDVED 1048

>YTHD3_PONPY (Q5RFL8) YTH domain protein 3|
          Length = 585

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 113 PIRAVKARLRXPRPEAPGPGQRRAPQGQAQP 205
           P   V+++L   +P+ P P Q++ PQ QAQP
Sbjct: 310 PPPLVQSQLPQQQPQPPQPQQQQGPQPQAQP 340

>YTHD3_MOUSE (Q8BYK6) YTH domain protein 3|
          Length = 585

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 113 PIRAVKARLRXPRPEAPGPGQRRAPQGQAQP 205
           P   V+++L   +P+ P P Q++ PQ QAQP
Sbjct: 310 PPPLVQSQLPQQQPQPPQPQQQQGPQPQAQP 340

>YTHD3_HUMAN (Q7Z739) YTH domain protein 3|
          Length = 585

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 113 PIRAVKARLRXPRPEAPGPGQRRAPQGQAQP 205
           P   V+++L   +P+ P P Q++ PQ QAQP
Sbjct: 310 PPPLVQSQLPQQQPQPPQPQQQQGPQPQAQP 340

>E1A_ADE07 (P03256) Early E1A 28 kDa protein|
          Length = 261

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 228 EASEEVPPLDLNELLAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKD-HFVYDPLSTS 404
           +A+ +V  LD  EL  +  K      +  G+K  +C     SLC  R   HF+Y P+S  
Sbjct: 145 KAASDVFKLDCPELPGHGCKSCEFHRNNTGMKELLC-----SLCYMRMHCHFIYSPVSDD 199

Query: 405 ESSS 416
           ES S
Sbjct: 200 ESPS 203

>YAED_SCHPO (Q09853) Hypothetical protein C23D3.13c in chromosome I|
          Length = 1616

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +3

Query: 282 LKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHFVYDPLSTSESSSFRNDNTCDELDLRIA 461
           L++S  +F    I   VC   ++     + DH  +  +S S S  F+  N   EL  R A
Sbjct: 768 LRKSSEVFYSFSILETVCSCNLDRFLDSKLDHSGWSLISKSLSEVFKIINVAPELRTRAA 827

Query: 462 SVL 470
           + L
Sbjct: 828 NCL 830


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,308,347
Number of Sequences: 219361
Number of extensions: 1261256
Number of successful extensions: 4030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4029
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)