ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21p23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds Length = 777 Score = 1134 bits (572), Expect = 0.0 Identities = 572/572 (100%) Strand = Plus / Plus Query: 14 ttgagcgtgtgggagtcgaaggaggacatcgagatggccactgcatatgctcctcccatg 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgagcgtgtgggagtcgaaggaggacatcgagatggccactgcatatgctcctcccatg 60 Query: 74 gcgagccaggtgatgaagagcggcttggcgtgctccaagccgcggggcatgtccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgagccaggtgatgaagagcggcttggcgtgctccaagccgcggggcatgtccggcgct 120 Query: 134 tcgctcacccggaggccccgcttcgtcgtcaaggctgtcaagtctgacaagccgacgtac 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcgctcacccggaggccccgcttcgtcgtcaaggctgtcaagtctgacaagccgacgtac 180 Query: 194 caagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccggtcacc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 caagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccggtcacc 240 Query: 254 tccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagc 300 Query: 314 ccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcgtcggccccttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcgtcggccccttc 360 Query: 374 gcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggcacactcggcgcc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggcacactcggcgcc 420 Query: 434 atcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcgcctccttcaac 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcgcctccttcaac 480 Query: 494 gagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaagaaggaggccgac 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaagaaggaggccgac 540 Query: 554 aagctccagaccgccgaagggtggtcgcagtt 585 |||||||||||||||||||||||||||||||| Sbjct: 541 aagctccagaccgccgaagggtggtcgcagtt 572
>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full insert sequence Length = 964 Score = 605 bits (305), Expect = e-170 Identities = 472/527 (89%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 73 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 129 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 163 |||||||||||| |||| |||| || |||||||| || |||||||||||||| ||| Sbjct: 130 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 189 Query: 164 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 223 ||||| || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 190 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 249 Query: 224 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctctcc 283 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 250 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 309 Query: 284 aacctccccgcctaccgcaccgccgtcagcccgctcctccgcggcatcgaggtcggcctc 343 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 310 aacctcccggcgtaccgcaccgccgtcagcccgctgctccgcggcatcgaggtcggcctc 369 Query: 344 gcccatggctacctcctcgtcggccccttcgcgctcactggcccgctccgcaacacgccc 403 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 370 gcccacggctacctcctcgtcgggcccttcgcgctcaccggcccgctccgcaacacgccg 429 Query: 404 gtgcacggacaggccggcacactcggcgccatcggactcgtctccatcctcagcgtctgc 463 |||||||| ||||||||| | ||||||||| || |||||| ||||||||||||||||| Sbjct: 430 gtgcacggccaggccggcgccctcggcgccgcaggcctcgtcgccatcctcagcgtctgc 489 Query: 464 ctcaccatgtacggcgtcgcctccttcaacgagggcgagccgtccaccgcgccggtgctc 523 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct: 490 ctcaccatgtacggcgtcgcctccttcggcgagggcgagccgtccacggcgccgacgctg 549 Query: 524 accctcaccggacgcaagaaggaggccgacaagctccagaccgccga 570 || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 550 acgctcaccggccgcaagaaggaggccgacaagctgcagaccgccga 596
>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full insert sequence Length = 932 Score = 605 bits (305), Expect = e-170 Identities = 472/527 (89%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 68 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 124 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 163 |||||||||||| |||| |||| || |||||||| || |||||||||||||| ||| Sbjct: 125 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 184 Query: 164 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 223 ||||| || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 185 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 244 Query: 224 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctctcc 283 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 245 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 304 Query: 284 aacctccccgcctaccgcaccgccgtcagcccgctcctccgcggcatcgaggtcggcctc 343 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 305 aacctcccggcgtaccgcaccgccgtcagcccgctgctccgcggcatcgaggtcggcctc 364 Query: 344 gcccatggctacctcctcgtcggccccttcgcgctcactggcccgctccgcaacacgccc 403 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 365 gcccacggctacctcctcgtcgggcccttcgcgctcaccggcccgctccgcaacacgccg 424 Query: 404 gtgcacggacaggccggcacactcggcgccatcggactcgtctccatcctcagcgtctgc 463 |||||||| ||||||||| | ||||||||| || |||||| ||||||||||||||||| Sbjct: 425 gtgcacggccaggccggcgccctcggcgccgcaggcctcgtcgccatcctcagcgtctgc 484 Query: 464 ctcaccatgtacggcgtcgcctccttcaacgagggcgagccgtccaccgcgccggtgctc 523 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct: 485 ctcaccatgtacggcgtcgcctccttcggcgagggcgagccgtccacggcgccgacgctg 544 Query: 524 accctcaccggacgcaagaaggaggccgacaagctccagaccgccga 570 || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 545 acgctcaccggccgcaagaaggaggccgacaagctgcagaccgccga 591
>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full insert sequence Length = 985 Score = 605 bits (305), Expect = e-170 Identities = 472/527 (89%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 90 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 146 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 163 |||||||||||| |||| |||| || |||||||| || |||||||||||||| ||| Sbjct: 147 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 206 Query: 164 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 223 ||||| || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 207 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 266 Query: 224 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctctcc 283 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 267 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 326 Query: 284 aacctccccgcctaccgcaccgccgtcagcccgctcctccgcggcatcgaggtcggcctc 343 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 327 aacctcccggcgtaccgcaccgccgtcagcccgctgctccgcggcatcgaggtcggcctc 386 Query: 344 gcccatggctacctcctcgtcggccccttcgcgctcactggcccgctccgcaacacgccc 403 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 387 gcccacggctacctcctcgtcgggcccttcgcgctcaccggcccgctccgcaacacgccg 446 Query: 404 gtgcacggacaggccggcacactcggcgccatcggactcgtctccatcctcagcgtctgc 463 |||||||| ||||||||| | ||||||||| || |||||| ||||||||||||||||| Sbjct: 447 gtgcacggccaggccggcgccctcggcgccgcaggcctcgtcgccatcctcagcgtctgc 506 Query: 464 ctcaccatgtacggcgtcgcctccttcaacgagggcgagccgtccaccgcgccggtgctc 523 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct: 507 ctcaccatgtacggcgtcgcctccttcggcgagggcgagccgtccacggcgccgacgctg 566 Query: 524 accctcaccggacgcaagaaggaggccgacaagctccagaccgccga 570 || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 567 acgctcaccggccgcaagaaggaggccgacaagctgcagaccgccga 613
>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full insert sequence Length = 923 Score = 597 bits (301), Expect = e-167 Identities = 471/527 (89%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 118 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 174 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 163 |||||||||||| |||| |||| || |||||||| || |||||||||||||| | | Sbjct: 175 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagcc 234 Query: 164 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 223 ||||| || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 235 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 294 Query: 224 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctctcc 283 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 295 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 354 Query: 284 aacctccccgcctaccgcaccgccgtcagcccgctcctccgcggcatcgaggtcggcctc 343 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 355 aacctcccggcgtaccgcaccgccgtcagcccgctgctccgcggcatcgaggtcggcctc 414 Query: 344 gcccatggctacctcctcgtcggccccttcgcgctcactggcccgctccgcaacacgccc 403 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 415 gcccacggctacctcctcgtcgggcccttcgcgctcaccggcccgctccgcaacacgccg 474 Query: 404 gtgcacggacaggccggcacactcggcgccatcggactcgtctccatcctcagcgtctgc 463 |||||||| ||||||||| | ||||||||| || |||||| ||||||||||||||||| Sbjct: 475 gtgcacggccaggccggcgccctcggcgccgcaggcctcgtcgccatcctcagcgtctgc 534 Query: 464 ctcaccatgtacggcgtcgcctccttcaacgagggcgagccgtccaccgcgccggtgctc 523 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct: 535 ctcaccatgtacggcgtcgcctccttcggcgagggcgagccgtccacggcgccgacgctg 594 Query: 524 accctcaccggacgcaagaaggaggccgacaagctccagaccgccga 570 || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 595 acgctcaccggccgcaagaaggaggccgacaagctgcagaccgccga 641
>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full insert sequence Length = 923 Score = 597 bits (301), Expect = e-167 Identities = 471/527 (89%), Gaps = 3/527 (0%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 118 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 174 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 163 |||||||||||| |||| |||| || |||||||| || |||||||||||||| | | Sbjct: 175 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagcc 234 Query: 164 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 223 ||||| || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 235 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 294 Query: 224 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctctcc 283 |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 295 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 354 Query: 284 aacctccccgcctaccgcaccgccgtcagcccgctcctccgcggcatcgaggtcggcctc 343 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 355 aacctcccggcgtaccgcaccgccgtcagcccgctgctccgcggcatcgaggtcggcctc 414 Query: 344 gcccatggctacctcctcgtcggccccttcgcgctcactggcccgctccgcaacacgccc 403 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 415 gcccacggctacctcctcgtcgggcccttcgcgctcaccggcccgctccgcaacacgccg 474 Query: 404 gtgcacggacaggccggcacactcggcgccatcggactcgtctccatcctcagcgtctgc 463 |||||||| ||||||||| | ||||||||| || |||||| ||||||||||||||||| Sbjct: 475 gtgcacggccaggccggcgccctcggcgccgcaggcctcgtcgccatcctcagcgtctgc 534 Query: 464 ctcaccatgtacggcgtcgcctccttcaacgagggcgagccgtccaccgcgccggtgctc 523 ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct: 535 ctcaccatgtacggcgtcgcctccttcggcgagggcgagccgtccacggcgccgacgctg 594 Query: 524 accctcaccggacgcaagaaggaggccgacaagctccagaccgccga 570 || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 595 acgctcaccggccgcaagaaggaggccgacaagctgcagaccgccga 641
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 507 bits (256), Expect = e-140 Identities = 355/388 (91%) Strand = Plus / Plus Query: 183 agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 242 |||| |||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 13160888 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 13160947 Query: 243 cgccggtcacctccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgca 302 ||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 13160948 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctcccggcgtaccgca 13161007 Query: 303 ccgccgtcagcccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcg 362 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 13161008 ccgccgtcagcccgctgctccgcggcatcgaggtcggcctcgcccacggctacctcctcg 13161067 Query: 363 tcggccccttcgcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggca 422 |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 13161068 tcgggcccttcgcgctcaccggcccgctccgcaacacgccggtgcacggccaggccggcg 13161127 Query: 423 cactcggcgccatcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcg 482 | ||||||||| || |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 13161128 ccctcggcgccgcaggcctcgtcgccatcctcagcgtctgcctcaccatgtacggcgtcg 13161187 Query: 483 cctccttcaacgagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaaga 542 |||||||| |||||||||||||||||| |||||| ||| || |||||||| ||||||| Sbjct: 13161188 cctccttcggcgagggcgagccgtccacggcgccgacgctgacgctcaccggccgcaaga 13161247 Query: 543 aggaggccgacaagctccagaccgccga 570 |||||||||||||||| ||||||||||| Sbjct: 13161248 aggaggccgacaagctgcagaccgccga 13161275 Score = 103 bits (52), Expect = 6e-19 Identities = 99/114 (86%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 13159779 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 13159835 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 157 |||||||||||| |||| |||| || |||||||| || |||||||||||||| Sbjct: 13159836 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 13159889
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 507 bits (256), Expect = e-140 Identities = 355/388 (91%) Strand = Plus / Plus Query: 183 agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 242 |||| |||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 13115163 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 13115222 Query: 243 cgccggtcacctccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgca 302 ||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 13115223 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctcccggcgtaccgca 13115282 Query: 303 ccgccgtcagcccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcg 362 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 13115283 ccgccgtcagcccgctgctccgcggcatcgaggtcggcctcgcccacggctacctcctcg 13115342 Query: 363 tcggccccttcgcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggca 422 |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 13115343 tcgggcccttcgcgctcaccggcccgctccgcaacacgccggtgcacggccaggccggcg 13115402 Query: 423 cactcggcgccatcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcg 482 | ||||||||| || |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 13115403 ccctcggcgccgcaggcctcgtcgccatcctcagcgtctgcctcaccatgtacggcgtcg 13115462 Query: 483 cctccttcaacgagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaaga 542 |||||||| |||||||||||||||||| |||||| ||| || |||||||| ||||||| Sbjct: 13115463 cctccttcggcgagggcgagccgtccacggcgccgacgctgacgctcaccggccgcaaga 13115522 Query: 543 aggaggccgacaagctccagaccgccga 570 |||||||||||||||| ||||||||||| Sbjct: 13115523 aggaggccgacaagctgcagaccgccga 13115550 Score = 103 bits (52), Expect = 6e-19 Identities = 99/114 (86%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 13114054 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 13114110 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 157 |||||||||||| |||| |||| || |||||||| || |||||||||||||| Sbjct: 13114111 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 13114164
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 507 bits (256), Expect = e-140 Identities = 355/388 (91%) Strand = Plus / Minus Query: 183 agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 242 |||| |||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 169854 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 169795 Query: 243 cgccggtcacctccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgca 302 ||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 169794 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctcccggcgtaccgca 169735 Query: 303 ccgccgtcagcccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcg 362 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 169734 ccgccgtcagcccgctgctccgcggcatcgaggtcggcctcgcccacggctacctcctcg 169675 Query: 363 tcggccccttcgcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggca 422 |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 169674 tcgggcccttcgcgctcaccggcccgctccgcaacacgccggtgcacggccaggccggcg 169615 Query: 423 cactcggcgccatcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcg 482 | ||||||||| || |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 169614 ccctcggcgccgcaggcctcgtcgccatcctcagcgtctgcctcaccatgtacggcgtcg 169555 Query: 483 cctccttcaacgagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaaga 542 |||||||| |||||||||||||||||| |||||| ||| || |||||||| ||||||| Sbjct: 169554 cctccttcggcgagggcgagccgtccacggcgccgacgctgacgctcaccggccgcaaga 169495 Query: 543 aggaggccgacaagctccagaccgccga 570 |||||||||||||||| ||||||||||| Sbjct: 169494 aggaggccgacaagctgcagaccgccga 169467 Score = 103 bits (52), Expect = 6e-19 Identities = 99/114 (86%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 170963 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 170907 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 157 |||||||||||| |||| |||| || |||||||| || |||||||||||||| Sbjct: 170906 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 170853
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 507 bits (256), Expect = e-140 Identities = 355/388 (91%) Strand = Plus / Plus Query: 183 agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 242 |||| |||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 150091 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 150150 Query: 243 cgccggtcacctccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgca 302 ||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 150151 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctcccggcgtaccgca 150210 Query: 303 ccgccgtcagcccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcg 362 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 150211 ccgccgtcagcccgctgctccgcggcatcgaggtcggcctcgcccacggctacctcctcg 150270 Query: 363 tcggccccttcgcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggca 422 |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 150271 tcgggcccttcgcgctcaccggcccgctccgcaacacgccggtgcacggccaggccggcg 150330 Query: 423 cactcggcgccatcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcg 482 | ||||||||| || |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150331 ccctcggcgccgcaggcctcgtcgccatcctcagcgtctgcctcaccatgtacggcgtcg 150390 Query: 483 cctccttcaacgagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaaga 542 |||||||| |||||||||||||||||| |||||| ||| || |||||||| ||||||| Sbjct: 150391 cctccttcggcgagggcgagccgtccacggcgccgacgctgacgctcaccggccgcaaga 150450 Query: 543 aggaggccgacaagctccagaccgccga 570 |||||||||||||||| ||||||||||| Sbjct: 150451 aggaggccgacaagctgcagaccgccga 150478 Score = 103 bits (52), Expect = 6e-19 Identities = 99/114 (86%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 148982 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 149038 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 157 |||||||||||| |||| |||| || |||||||| || |||||||||||||| Sbjct: 149039 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 149092
>gb|AY103985.1| Zea mays PCO103239 mRNA sequence Length = 1657 Score = 490 bits (247), Expect = e-135 Identities = 349/383 (91%) Strand = Plus / Plus Query: 188 acgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccg 247 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 acgtaccaggtggtgcagcccatcaacggcgacccgttcatcggcagcctggagacgccg 1069 Query: 248 gtcacctccagccccctcgtcgcgtggtacctctccaacctccccgcctaccgcaccgcc 307 |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1070 gtcacctccagcccgctcgtggcgtggtacctctccaacctcccggcctaccgcaccgcc 1129 Query: 308 gtcagcccgctcctccgcggcatcgaggtcggcctcgcccatggctacctcctcgtcggc 367 || |||||||| || || ||| |||||||||||||||| || |||||||||||||| || Sbjct: 1130 gtgagcccgctgctgcggggcgtcgaggtcggcctcgcgcacggctacctcctcgtgggg 1189 Query: 368 cccttcgcgctcactggcccgctccgcaacacgcccgtgcacggacaggccggcacactc 427 |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| | ||| Sbjct: 1190 cccttcgcgctcacgggcccgctccgcagcacgcccgtgcacggccaggccggcgcgctc 1249 Query: 428 ggcgccatcggactcgtctccatcctcagcgtctgcctcaccatgtacggcgtcgcctcc 487 |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1250 ggcgccgccggcctcgtcgccatcctcagcgtctgcctcaccatgtacggcgtcgcctcc 1309 Query: 488 ttcaacgagggcgagccgtccaccgcgccggtgctcaccctcaccggacgcaagaaggag 547 ||||||||||| || |||||||| ||||| |||||| |||||||| | ||||||||| Sbjct: 1310 ttcaacgagggggacccgtccacggcgcccacgctcacgctcaccggcaggaagaaggag 1369 Query: 548 gccgacaagctccagaccgccga 570 ||||||||||| ||||||||||| Sbjct: 1370 gccgacaagctgcagaccgccga 1392 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 66 ctcccatggcgagccaggtgatgaagagc 94 ||||||||||||||||||||||||||||| Sbjct: 879 ctcccatggcgagccaggtgatgaagagc 907
>dbj|AK063111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D07, full insert sequence Length = 470 Score = 103 bits (52), Expect = 6e-19 Identities = 99/114 (86%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 44 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 103 |||||||||||||| |||||||| ||||||||||||| ||||||||||| |||||| | Sbjct: 90 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 146 Query: 104 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 157 |||||||||||| |||| |||| || |||||||| || |||||||||||||| Sbjct: 147 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 200
>ref|NM_117349.2| Arabidopsis thaliana unknown protein AT4G12800 mRNA, complete cds Length = 984 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 398 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 457 Query: 327 g 327 | Sbjct: 458 g 458
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 3105 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 3164 Query: 327 g 327 | Sbjct: 3165 g 3165
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 194212 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 194271 Query: 327 g 327 | Sbjct: 194272 g 194272
>emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T20K18 (ESSA project) Length = 79375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 52600 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 52659 Query: 327 g 327 | Sbjct: 52660 g 52660
>emb|AJ245867.1|ATH245867 Arabidopsis thaliana mRNA for photosystem I subunit XI precursor Length = 928 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 366 tcgcgtggtacctttccaacctccctggttaccgtaccgccgtcaaccctctcctccgcg 425 Query: 327 g 327 | Sbjct: 426 g 426
>gb|AY097427.1| Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 660 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 251 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 310 Query: 327 g 327 | Sbjct: 311 g 311
>gb|AF446350.1|AF446350 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 821 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 287 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 346 Query: 327 g 327 | Sbjct: 347 g 347
>gb|AY059949.1| Arabidopsis thaliana probable photosystem I chain XI precursor (At4g12800; T20K18.150) mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 293 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 352 Query: 327 g 327 | Sbjct: 353 g 353
>gb|AF428447.1|AF428447 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 842 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 287 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 346 Query: 327 g 327 | Sbjct: 347 g 347
>emb|BX826431.1|CNS0A4G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 273 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 332 Query: 327 g 327 | Sbjct: 333 g 333
>emb|BX826834.1|CNS0A38Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 762 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 274 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 333 Query: 327 g 327 | Sbjct: 334 g 334
>emb|BX826723.1|CNS0A3CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 268 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 327 Query: 327 g 327 | Sbjct: 328 g 328
>emb|BX826537.1|CNS0A35T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 249 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctctcctccgcg 308 Query: 327 g 327 | Sbjct: 309 g 309
>gb|AY087339.1| Arabidopsis thaliana clone 34400 mRNA, complete sequence Length = 944 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| |||||||||| Sbjct: 399 tcgcgtggtacctttccaacctccctggttaccgtaccgccgtcaaccctctcctccgcg 458 Query: 327 g 327 | Sbjct: 459 g 459
>emb|BX841515.1|CNS09YGY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 267 tcgcgtggtacctctccaacctccccgcctaccgcaccgccgtcagcccgctcctccgcg 326 ||||||||||||| ||||||||||| | ||||| |||||||||| ||| || ||||||| Sbjct: 289 tcgcgtggtacctttccaacctccctggataccgtaccgccgtcaaccctcttctccgcg 348 Query: 327 g 327 | Sbjct: 349 g 349
>dbj|AB219568.1| Fragaria x ananassa FrPSI mRNA for photosystem I protein, partial cds Length = 404 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 530 accggacgcaagaaggaggccgacaagctccagaccgccgaa 571 ||||| |||||||||||| ||||| ||||||| ||||||||| Sbjct: 142 accggccgcaagaaggagcccgaccagctccaaaccgccgaa 183
>ref|XM_363340.1| Magnaporthe grisea 70-15 hypothetical protein (MG01266.4) partial mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 tcatcggcagcctggagacgcc 246 |||||||||||||||||||||| Sbjct: 1028 tcatcggcagcctggagacgcc 1007
>gb|BT018644.1| Zea mays clone EL01N0505B01.d mRNA sequence Length = 1630 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 cgaggtcggcctcgcccatgg 351 ||||||||||||||||||||| Sbjct: 997 cgaggtcggcctcgcccatgg 977
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 acgccggtcacctccagcccc 262 ||||||||||||||||||||| Sbjct: 970905 acgccggtcacctccagcccc 970925
>ref|XM_726405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00570) partial mRNA Length = 1050 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 265 cgtcgcgtggtacctctccaacctccccg 293 |||||||||||||| ||||||||||||| Sbjct: 414 cgtcgcgtggtaccgttccaacctccccg 442
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 ctcgtcgcgtggtacctctccaacctccccgcc 295 |||| |||||||| |||||||||||||| |||| Sbjct: 16116504 ctcgacgcgtggttcctctccaacctccgcgcc 16116536
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 cgcgctcactggcccgctccg 393 ||||||||||||||||||||| Sbjct: 4178355 cgcgctcactggcccgctccg 4178375 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 catcgaggtcggcctcgccc 347 |||||||||||||||||||| Sbjct: 8946139 catcgaggtcggcctcgccc 8946158
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 tcggcagcctggagacgccgg 248 ||||||||||||||||||||| Sbjct: 1728 tcggcagcctggagacgccgg 1748
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 ctcgtcgcgtggtacctctccaacctccccgcc 295 |||| |||||||| |||||||||||||| |||| Sbjct: 54584 ctcgacgcgtggttcctctccaacctccgcgcc 54616
>dbj|AB039379.1| Streptomyces aureofaciens tcsD, tcsE, tcsF, tcsG, genes for beta-ketoacyl synthase, beta-ketoacyl synthase2, acyl carrier protein, asparagine synthase homolog, complete cds Length = 5188 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 gcgagccgtccaccgcgccgg 518 ||||||||||||||||||||| Sbjct: 2293 gcgagccgtccaccgcgccgg 2273
>ref|NM_001037124.1| Danio rerio zgc:123341 (zgc:123341), mRNA Length = 1067 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 catcctcagcgtctgcctca 467 |||||||||||||||||||| Sbjct: 316 catcctcagcgtctgcctca 297
>gb|BC083003.1| Xenopus laevis cDNA clone IMAGE:3397120 Length = 1320 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gacatcgagatggccactgc 57 |||||||||||||||||||| Sbjct: 5 gacatcgagatggccactgc 24
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctcctcgtcggccccttcgc 375 |||||||||||||||||||| Sbjct: 96245 ctcctcgtcggccccttcgc 96226
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gatgaagagcggcttggcgtgctc 108 ||||| |||||||||||||||||| Sbjct: 394400 gatgatgagcggcttggcgtgctc 394377
>gb|BC074210.1| Xenopus laevis MGC83376 protein, mRNA (cDNA clone MGC:83376 IMAGE:7007890), complete cds Length = 1363 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gacatcgagatggccactgc 57 |||||||||||||||||||| Sbjct: 7 gacatcgagatggccactgc 26
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgcggcatcgaggtcggcc 341 |||||||||||||||||||| Sbjct: 2408060 ccgcggcatcgaggtcggcc 2408079 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcatcgaggtcggcctcgcc 346 |||||||||||||||||||| Sbjct: 577051 gcatcgaggtcggcctcgcc 577032
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gatgaagagcggcttggcgtgctc 108 ||||| |||||||||||||||||| Sbjct: 1125109 gatgatgagcggcttggcgtgctc 1125086
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctcctcgtcggccccttcgc 375 |||||||||||||||||||| Sbjct: 5291 ctcctcgtcggccccttcgc 5272
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 315 cgctcctccgcggcatcgaggtcggcct 342 |||||||| ||||| ||||||||||||| Sbjct: 6590 cgctcctcagcggcgtcgaggtcggcct 6617
>ref|XM_656558.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4046.2), mRNA Length = 1476 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 accaagtggtccagcccatc 211 |||||||||||||||||||| Sbjct: 927 accaagtggtccagcccatc 908
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgcggcatcgaggtcggcc 341 |||||||||||||||||||| Sbjct: 3193803 ccgcggcatcgaggtcggcc 3193784
>emb|AL391136.10| Human DNA sequence from clone RP11-304C14 on chromosome 10 Contains part of the TLL2 gene for tolloid-like 2, complete sequence Length = 66188 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gtggtacctctccaacctcc 290 |||||||||||||||||||| Sbjct: 62756 gtggtacctctccaacctcc 62775
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 gccgacaagctccagaccgccgaa 571 ||||||||||||||| |||||||| Sbjct: 1174948 gccgacaagctccagtccgccgaa 1174925
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 aggtcggcctcgcccatggc 352 |||||||||||||||||||| Sbjct: 217148 aggtcggcctcgcccatggc 217167
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 aggtcggcctcgcccatggc 352 |||||||||||||||||||| Sbjct: 215196 aggtcggcctcgcccatggc 215215
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgcggcatcgaggtcggcc 341 |||||||||||||||||||| Sbjct: 173448 ccgcggcatcgaggtcggcc 173429
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gatgaagagcggcttggcgtgctc 108 ||||| |||||||||||||||||| Sbjct: 1006069 gatgatgagcggcttggcgtgctc 1006046
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ccgcggcatcgaggtcggcc 341 |||||||||||||||||||| Sbjct: 2979654 ccgcggcatcgaggtcggcc 2979673
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctcctcgtcggccccttcgc 375 |||||||||||||||||||| Sbjct: 18238032 ctcctcgtcggccccttcgc 18238013
>gb|AY826885.1| Heterocapsa triquetra clone HTPSAL1 chloroplast photosystem I subunit XI mRNA, complete cds; nuclear gene for chloroplast product Length = 1197 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ggcccgctccgcaacacgcc 402 |||||||||||||||||||| Sbjct: 892 ggcccgctccgcaacacgcc 911
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tcgaggtcggcctcgcccat 349 |||||||||||||||||||| Sbjct: 4350722 tcgaggtcggcctcgcccat 4350703
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ccgcggcatcgaggtcggcc 341 |||||||||||||||||||| Sbjct: 5407694 ccgcggcatcgaggtcggcc 5407675
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ctcctcgtcggccccttcgc 375 |||||||||||||||||||| Sbjct: 18396929 ctcctcgtcggccccttcgc 18396910
>gb|BC107646.1| Danio rerio zgc:123341, mRNA (cDNA clone MGC:123341 IMAGE:7413031), complete cds Length = 1067 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 catcctcagcgtctgcctca 467 |||||||||||||||||||| Sbjct: 316 catcctcagcgtctgcctca 297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,969,840 Number of Sequences: 3902068 Number of extensions: 2969840 Number of successful extensions: 59772 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58249 Number of HSP's gapped (non-prelim): 1511 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
