ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21p09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTRD_METTM (P80183) Tetrahydromethanopterin S-methyltransferase ... 28 7.2
2MTRD_METTH (O27230) Tetrahydromethanopterin S-methyltransferase ... 28 7.2

>MTRD_METTM (P80183) Tetrahydromethanopterin S-methyltransferase subunit D (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit D)
          Length = 233

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 35  AMATHTGVAASKVLILVGEGLTGSI 109
           AMAT TGV     ++  G GLTG I
Sbjct: 32  AMATATGVGTGTAMLAAGAGLTGLI 56



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>MTRD_METTH (O27230) Tetrahydromethanopterin S-methyltransferase subunit D (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit D)
          Length = 233

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 35  AMATHTGVAASKVLILVGEGLTGSI 109
           AMAT TGV     ++  G GLTG I
Sbjct: 32  AMATATGVGTGTAMLAAGAGLTGLI 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,299,403
Number of Sequences: 219361
Number of extensions: 102071
Number of successful extensions: 358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 80,573,946
effective HSP length: 12
effective length of database: 77,941,614
effective search space used: 1870598736
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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