>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 97     ggccgcgaagatggtggccgccttcgccg 125
              ||||| ||||||||||||||| |||||||
Sbjct: 351114 ggccgagaagatggtggccgcgttcgccg 351142

>gb|AY545019.1| Burkholderia pseudomallei clone BPtf0032 putative AraC/XylS family
           transcription factor gene, complete cds
          Length = 1011

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 97  ggccgcgaagatggtggccgccttcgccg 125
           ||||| ||||||||||||||| |||||||
Sbjct: 288 ggccgagaagatggtggccgcgttcgccg 316

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 97      ggccgcgaagatggtggccgccttcgccg 125
               ||||| ||||||||||||||| |||||||
Sbjct: 1670286 ggccgagaagatggtggccgcgttcgccg 1670314

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 92      cagcaggccgcgaagatggtggccg 116
               ||||||||||||| |||||||||||
Sbjct: 3026513 cagcaggccgcgatgatggtggccg 3026489

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 97      ggccgcgaagatggtggccgccttcgccg 125
               ||||| ||||||||||||||| |||||||
Sbjct: 1120727 ggccgagaagatggtggccgcgttcgccg 1120755

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cttcctcctccatatgcggc 151
              ||||||||||||||||||||
Sbjct: 253527 cttcctcctccatatgcggc 253546

>gb|AC009113.8| Homo sapiens chromosome 16 clone RP11-46C24, complete sequence
          Length = 138740

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    agcaggccgcgaagatggtg 112
             ||||||||||||||||||||
Sbjct: 89699 agcaggccgcgaagatggtg 89680

>gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complete sequence
          Length = 163985

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cttcctcctccatatgcggc 151
              ||||||||||||||||||||
Sbjct: 109998 cttcctcctccatatgcggc 110017

>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence
          Length = 120757

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tcactccttcctcctccata 145
             ||||||||||||||||||||
Sbjct: 71719 tcactccttcctcctccata 71700

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     ggaagcgcgcgagctgctgc 85
              ||||||||||||||||||||
Sbjct: 566512 ggaagcgcgcgagctgctgc 566531


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,605,940
Number of Sequences: 3902068
Number of extensions: 1605940
Number of successful extensions: 35563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35242
Number of HSP's gapped (non-prelim): 321
length of query: 309
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 287
effective length of database: 17,147,199,772
effective search space: 4921246334564
effective search space used: 4921246334564
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)