ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21o12 |
|---|---|
| Clone Library Name | barley_pub |
>PDXJ_SYNY3 (P72776) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = -1 Query: 115 APRPEVPARH-GAVAVACTVEVELGHPADFGHGVAH 11 AP + AR G++A+AC + +ELG + GHG+ + Sbjct: 161 APTADDQARELGSLAIACDIALELGLRINAGHGLTY 196
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -2 Query: 123 PAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTP 7 PAK P P V++P P+ +K PP + SP+P Sbjct: 173 PAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSPSP 211
>DKK2_HUMAN (Q9UBU2) Dickkopf-related protein 2 precursor (Dkk-2) (Dickkopf-2)| (hDkk-2) Length = 259 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -2 Query: 333 SSACLTNRPWKP*GTRDGSCTSATMSRSGDCASITTNXL 217 SSAC+ R K RDG C +T +G C +T + L Sbjct: 97 SSACMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTESIL 135
>PLS3_HUMAN (Q9NRY6) Phospholipid scramblase 3 (PL scramblase 3)| (Ca(2+)-dependent phospholipid scramblase 3) Length = 295 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 Query: 123 PAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTP 7 PA HPGP Q P PA + +P + +GS P Sbjct: 27 PALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGSAAP 65
>GUN1_ACICE (P54583) Endoglucanase E1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E1) (Cellulase E1) (Endocellulase E1) Length = 562 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPI--LGMGSPTPKP 1 SP+ P P + R +P P S + TP SPTP P Sbjct: 414 SPSPSPSPSASRTPTPTPTPTASPTPTLTPTATPTPTASPTPSP 457
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 S A P P ++ +QSP PA + + +P + +PTP P Sbjct: 5 SQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAP 46
>BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)| (Beta-carotene dioxygenase 2) (B-diox-II) Length = 532 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 218 NXFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLXV 319 N +V+DA+S + ++P ++PYGFHG V Sbjct: 499 NFLLVLDAKS--FTELGRAEVPVQMPYGFHGTFV 530
>DKK2_MOUSE (Q9QYZ8) Dickkopf-related protein 2 precursor (Dkk-2) (Dickkopf-2)| (mDkk-2) Length = 259 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -2 Query: 333 SSACLTNRPWKP*GTRDGSCTSATMSRSGDCASITTNXL 217 SSAC+ R K RDG C T +G C +T + L Sbjct: 97 SSACMLCRRKKKRCHRDGMCCPGTRCNNGICIPVTESIL 135
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = -2 Query: 135 KNGSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 + G P + PG RRA P +K P L G TPKP Sbjct: 934 RRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPKP 978
>BCDO2_MACFA (Q8HXG8) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)| (Beta-carotene dioxygenase 2) (B-diox-II) Length = 556 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +2 Query: 218 NXFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLXV 319 N +V+DA++ + + ++P ++PYGFHG + Sbjct: 523 NFLLVLDAKN--FEELGRAEVPVQMPYGFHGTFI 554
>BCDO2_HUMAN (Q9BYV7) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)| (Beta-carotene dioxygenase 2) (B-diox-II) Length = 556 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +2 Query: 218 NXFVVMDAQSPDLDIVAEVQLPSRVPYGFHGLXV 319 N +V+DA++ + + ++P ++PYGFHG + Sbjct: 523 NFLLVLDAKN--FEELGRAEVPVQMPYGFHGTFI 554
>RPE65_MOUSE (Q91ZQ5) Retinal pigment epithelium-specific 65 kDa protein| Length = 532 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/72 (25%), Positives = 27/72 (37%) Frame = +2 Query: 107 PGCFAGEPFFVSXXXXXXXXXXXXXXXCYVHDEGTGDNXFVVMDAQSPDLDIVAEVQLPS 286 P + EP FVS V G G ++ + DL +A ++ + Sbjct: 462 PDSYPSEPIFVSQPDALEEDDGVVLSV--VVSPGAGQKPAYLLVLNAKDLSEIARAEVET 519 Query: 287 RVPYGFHGLXVR 322 +P FHGL R Sbjct: 520 NIPVTFHGLFKR 531
>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 800 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 Query: 243 SRPTWTSSPRCSFHPASPTASTA 311 S PTWTSS R F PT +TA Sbjct: 647 SAPTWTSSTRPGFSAQLPTQATA 669
>MYLK_BOVIN (Q28824) Myosin light chain kinase, smooth muscle (EC 2.7.11.18)| (MLCK) [Contains: Telokin] Length = 1176 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -2 Query: 132 NGSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSP--TPKP 1 N PA+ P P ++P P S TP LG P TPKP Sbjct: 166 NVKPAETPKPLGNIKPTETPKPLGSTKPAETPKPLGSTKPAETPKP 211 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Frame = -2 Query: 132 NGSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSP--TPKP 1 N PA+ P P ++P P S TP LG P TPKP Sbjct: 130 NVKPAETPKPLGSTKPAETPKPLGSTKPAETPKPLGNVKPAETPKP 175 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Frame = -2 Query: 123 PAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSP--TPKP 1 PA+ P P ++P P S TP LG P TPKP Sbjct: 121 PAETPKPLGNVKPAETPKPLGSTKPAETPKPLGSTKPAETPKP 163
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/42 (35%), Positives = 16/42 (38%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 SP P P SP P S + TP SPTP P Sbjct: 116 SPTPTPSPTPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSP 157 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 SP P P + SP P+ + + TP SPTP P Sbjct: 126 SPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP 167 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 SP P P SP P+ + S TP +PTP P Sbjct: 122 SPTPSPTPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSP 163
>MDCG_PSEPU (Q9Z448) Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)| (Holo-ACP synthase) Length = 204 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 117 KHPGPKSRRATVQSPWPARSKSSLATPPILGMG 19 + GP++ R QSPWPA + TP + G Sbjct: 72 RQQGPEALRVHGQSPWPALQALASVTPVLQARG 104
>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated| protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) Length = 872 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -2 Query: 135 KNGSPAKHPGPKSRRATVQSPWPARSKSSLA----TPPILGMGSPTPKP 1 K G+P P + V++P R + + TP +L MG+P P+P Sbjct: 175 KMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMGAPVPRP 223
>SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 669 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 SP H P ++ P PA S + A PP P P P Sbjct: 612 SPPSHFCPHPMSLSLSQPGPAPSPALTAPPPAYATLGPRPSP 653
>DIA_DROME (P48608) Protein diaphanous| Length = 1091 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 6/49 (12%) Frame = -2 Query: 129 GSPAKHPGPKSRRA------TVQSPWPARSKSSLATPPILGMGSPTPKP 1 G+P P P RA P P R+ PP GMG P P P Sbjct: 522 GAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPPP 570
>HPLN2_RAT (Q9ESM2) Hyaluronan and proteoglycan link protein 2 precursor| (Brain link protein 1) Length = 341 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 129 GSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPK 4 G+PA HPGP + +R ++ P +LG P+ K Sbjct: 27 GNPAPHPGPHYLLPPIHEVIHSRRGATATLPCVLGTSPPSYK 68
>HPLN2_MOUSE (Q9ESM3) Hyaluronan and proteoglycan link protein 2 precursor| (Brain link protein 1) Length = 341 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 129 GSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPK 4 G+PA HPGP + +R ++ P +LG P+ K Sbjct: 27 GNPAPHPGPHYLLPPIHEVIHSRRGATATLPCVLGTSPPSYK 68
>RPE65_RAT (O70276) Retinal pigment epithelium-specific 65 kDa protein| Length = 532 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/69 (24%), Positives = 26/69 (37%) Frame = +2 Query: 107 PGCFAGEPFFVSXXXXXXXXXXXXXXXCYVHDEGTGDNXFVVMDAQSPDLDIVAEVQLPS 286 P + EP FVS V G G ++ + DL +A ++ + Sbjct: 462 PDSYPSEPIFVSQPDALEEDDGVVLSV--VVSPGAGQKPAYLLVLNAKDLSEIARAEVET 519 Query: 287 RVPYGFHGL 313 +P FHGL Sbjct: 520 NIPVTFHGL 528
>GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (mmGCN5) Length = 830 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 S A +P P ++ + SP PA + + +P +PTP P Sbjct: 5 SQAPNPVPAAQPRPLHSPAPAPTSTPAPSPASASTPAPTPAP 46
>FETUB_HUMAN (Q9UGM5) Fetuin-B precursor (IRL685) (16G2)| Length = 382 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 111 PGPKSRRATVQSPWPARSKSSLATPP 34 P PK + T + P PA++ S L PP Sbjct: 357 PFPKEKARTAECPGPAQNASPLVLPP 382
>VGLI_HHV11 (P06487) Glycoprotein I| Length = 390 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -2 Query: 114 HPG--PKSRRATVQSPWPARSKSSLATPPILGMGSPTP 7 HP PKSRR + ++P P+ + + + P G PTP Sbjct: 338 HPSTPPKSRRRSSRTPMPSLTAIAEESEPAGAAGLPTP 375
>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein| SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1) Length = 592 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -2 Query: 132 NGSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTPKP 1 + +P P AT SPWPA T +G G+P +P Sbjct: 527 SATPLSPQPPSEEPAT--SPWPAEQSPKSRTSEEMGAGAPMREP 568
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -2 Query: 126 SPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTP 7 +P ++P P + T P+PA + +A PP++ M P P Sbjct: 210 TPQQNPPPPVQATT--HPFPAVTPDLIAQPPVMTMVPPQP 247
>FETUA_RABIT (P80191) Alpha-2-HS-glycoprotein precursor (Fetuin-A) (Haemonectin)| (Fragment) Length = 360 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -2 Query: 129 GSPAKHPGPKSRRATVQSPWPARSKSSLATPPILGMGSPTP 7 G+ A P P A+ SP +S SSL P+L +P P Sbjct: 262 GAAAVEPAPAVDPASPVSPPDGQSPSSLVVGPVLVAQAPAP 302 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,467,711 Number of Sequences: 219361 Number of extensions: 615682 Number of successful extensions: 2661 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2358 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2641 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
