| Clone Name | baal22d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191221.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2739 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 863 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 922 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 923 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 982 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 983 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 1042 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 1043 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 1102 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 1103 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 1162 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 1163 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 1222 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 1223 tgttggtgcaaattgc 1238
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Minus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 31369695 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 31369636 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 31369635 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 31369576 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 31369575 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 31369516 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 31369515 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 31369456 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 31369455 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 31369396 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 31369395 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 31369336 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 31369335 tgttggtgcaaattgc 31369320 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 30454446 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 30454505 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 30454506 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 30454565 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 30454566 aggcagtgttggtgcagattgcaaa 30454590 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 30454226 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 30454285 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 30454286 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 30454345 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 30454346 actgttgggataaagatcatgcc 30454368
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Minus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 123978 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 123919 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 123918 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 123859 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 123858 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 123799 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 123798 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 123739 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 123738 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 123679 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 123678 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 123619 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 123618 tgttggtgcaaattgc 123603
>dbj|AK103775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143P14, full insert sequence Length = 3039 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 1096 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 1155 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 1156 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 1215 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1216 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 1275 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 1276 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 1335 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 1336 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 1395 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 1396 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 1455 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 1456 tgttggtgcaaattgc 1471
>dbj|AK102455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A19, full insert sequence Length = 3876 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 1109 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 1168 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 1169 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 1228 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1229 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 1288 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 1289 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 1348 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 1349 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 1408 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 1409 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 1468 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 1469 tgttggtgcaaattgc 1484
>dbj|AK067731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P06, full insert sequence Length = 3432 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 1109 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 1168 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 1169 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 1228 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1229 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 1288 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 1289 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 1348 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 1349 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 1408 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 1409 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 1468 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 1469 tgttggtgcaaattgc 1484
>dbj|AK064990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D09, full insert sequence Length = 3272 Score = 404 bits (204), Expect = e-110 Identities = 333/376 (88%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 |||||||||||||||| || || || ||||||||||| || || ||||| |||||||||| Sbjct: 1109 cgctgctcaattgtgaccttattggattccacacttttgactatgccagacatttcctct 1168 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | || || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| Sbjct: 1169 cttgttgtagtaggatgctgggaattgaataccagtcaaagcgtggatacattgggttgg 1228 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||| || || |||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1229 attactttgggcgtaccgttgggatcaaaatcatgccagtgggagttcatatgggtcaat 1288 Query: 181 tgcagtcggttctctgcttgccggacaggcagtggagagtttccgagctgcagcagcagt 240 || || ||||||| ||||||| |||||| | ||||| || ||||||||||||||||| | Sbjct: 1289 tgaagacggttctgagcttgcccgacagggaatggagggtctccgagctgcagcagcaat 1348 Query: 241 ttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaagggatcaatt 300 |||||||||||||||||||||||||| ||||||| ||||||||||| || || ||||| | Sbjct: 1349 ttgaggggaagactgtgttgctcggtgtggatgacatggatatcttcaagggtatcaact 1408 Query: 301 tgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggacgagcag 360 |||||||||||||||| ||||||||| |||||||||| |||||||||||||| || |||| Sbjct: 1409 tgaagcttcttgccttcgagaatatgttgaggacacatcccaagtggcaggggcgggcag 1468 Query: 361 tgttggtgcagattgc 376 |||||||||| ||||| Sbjct: 1469 tgttggtgcaaattgc 1484
>ref|XM_475716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 182 bits (92), Expect = 6e-43 Identities = 161/184 (87%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 ||||||| ||||| |||||||| || |||||||| |||||||| || ||||| ||||| | Sbjct: 818 cgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctat 877 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | ||||| |||||||||||||| || || |||||||| |||||||||||||||||||||| Sbjct: 878 cttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattgg 937 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||||||||||||||| ||||| |||||||| |||||| | ||||||| ||| | Sbjct: 938 attactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaat 997 Query: 181 tgca 184 |||| Sbjct: 998 tgca 1001 Score = 143 bits (72), Expect = 5e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 225 gagctgcagcagcagtttgaggggaagactgtgttgctcggtatggatgatatggatatc 284 ||||||| |||||| || ||||| ||| | ||||| || ||| ||||||||||||||||| Sbjct: 1042 gagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatc 1101 Query: 285 tttaaagggatcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaag 344 || || || ||||| || || |||||||| |||||||||||||||||||| || |||||| Sbjct: 1102 ttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaag 1161 Query: 345 tggcagggacgagcagtgttggtgcagattgcaaagccag 384 ||| ||||| |||| |||||||||||||||||||| |||| Sbjct: 1162 tggaagggaagagctgtgttggtgcagattgcaaacccag 1201
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 182 bits (92), Expect = 6e-43 Identities = 161/184 (87%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 ||||||| ||||| |||||||| || |||||||| |||||||| || ||||| ||||| | Sbjct: 82635 cgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctat 82694 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | ||||| |||||||||||||| || || |||||||| |||||||||||||||||||||| Sbjct: 82695 cttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattgg 82754 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||||||||||||||| ||||| |||||||| |||||| | ||||||| ||| | Sbjct: 82755 attactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaat 82814 Query: 181 tgca 184 |||| Sbjct: 82815 tgca 82818 Score = 143 bits (72), Expect = 5e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 225 gagctgcagcagcagtttgaggggaagactgtgttgctcggtatggatgatatggatatc 284 ||||||| |||||| || ||||| ||| | ||||| || ||| ||||||||||||||||| Sbjct: 82859 gagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatc 82918 Query: 285 tttaaagggatcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaag 344 || || || ||||| || || |||||||| |||||||||||||||||||| || |||||| Sbjct: 82919 ttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaag 82978 Query: 345 tggcagggacgagcagtgttggtgcagattgcaaagccag 384 ||| ||||| |||| |||||||||||||||||||| |||| Sbjct: 82979 tggaagggaagagctgtgttggtgcagattgcaaacccag 83018
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 182 bits (92), Expect = 6e-43 Identities = 161/184 (87%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 ||||||| ||||| |||||||| || |||||||| |||||||| || ||||| ||||| | Sbjct: 25442274 cgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctat 25442333 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | ||||| |||||||||||||| || || |||||||| |||||||||||||||||||||| Sbjct: 25442334 cttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattgg 25442393 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||||||||||||||| ||||| |||||||| |||||| | ||||||| ||| | Sbjct: 25442394 attactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaat 25442453 Query: 181 tgca 184 |||| Sbjct: 25442454 tgca 25442457 Score = 143 bits (72), Expect = 5e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 225 gagctgcagcagcagtttgaggggaagactgtgttgctcggtatggatgatatggatatc 284 ||||||| |||||| || ||||| ||| | ||||| || ||| ||||||||||||||||| Sbjct: 25442498 gagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatc 25442557 Query: 285 tttaaagggatcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaag 344 || || || ||||| || || |||||||| |||||||||||||||||||| || |||||| Sbjct: 25442558 ttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaag 25442617 Query: 345 tggcagggacgagcagtgttggtgcagattgcaaagccag 384 ||| ||||| |||| |||||||||||||||||||| |||| Sbjct: 25442618 tggaagggaagagctgtgttggtgcagattgcaaacccag 25442657
>dbj|AK072066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H22, full insert sequence Length = 3498 Score = 182 bits (92), Expect = 6e-43 Identities = 161/184 (87%) Strand = Plus / Plus Query: 1 cgctgctcaattgtgatctcatcgggttccacactttcgattacgccaggcatttcctct 60 ||||||| ||||| |||||||| || |||||||| |||||||| || ||||| ||||| | Sbjct: 993 cgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctat 1052 Query: 61 catgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacattggattgg 120 | ||||| |||||||||||||| || || |||||||| |||||||||||||||||||||| Sbjct: 1053 cttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattgg 1112 Query: 121 agtactttggccgcactgttgggatcaaaatcatgccggtgggagttcatatggatcagt 180 | |||||||||||||||||||| ||||| |||||||| |||||| | ||||||| ||| | Sbjct: 1113 attactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaat 1172 Query: 181 tgca 184 |||| Sbjct: 1173 tgca 1176 Score = 143 bits (72), Expect = 5e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 225 gagctgcagcagcagtttgaggggaagactgtgttgctcggtatggatgatatggatatc 284 ||||||| |||||| || ||||| ||| | ||||| || ||| ||||||||||||||||| Sbjct: 1217 gagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatc 1276 Query: 285 tttaaagggatcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaag 344 || || || ||||| || || |||||||| |||||||||||||||||||| || |||||| Sbjct: 1277 ttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaag 1336 Query: 345 tggcagggacgagcagtgttggtgcagattgcaaagccag 384 ||| ||||| |||| |||||||||||||||||||| |||| Sbjct: 1337 tggaagggaagagctgtgttggtgcagattgcaaacccag 1376
>ref|NM_191881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2637 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 1040 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 1099 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 1100 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 1159 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 1160 aggcagtgttggtgcagattgcaaa 1184 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 820 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 879 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 880 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 939 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 940 actgttgggataaagatcatgcc 962
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 82709 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 82768 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 82769 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 82828 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 82829 aggcagtgttggtgcagattgcaaa 82853 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 82489 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 82548 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 82549 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 82608 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 82609 actgttgggataaagatcatgcc 82631
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 140173 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 140232 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 140233 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 140292 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 140293 aggcagtgttggtgcagattgcaaa 140317 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 139953 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 140012 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 140013 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 140072 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 140073 actgttgggataaagatcatgcc 140095
>dbj|AK109542.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-B04, full insert sequence Length = 1589 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 1182 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 1241 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 1242 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 1301 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 1302 aggcagtgttggtgcagattgcaaa 1326 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 962 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 1021 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 1022 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 1081 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 1082 actgttgggataaagatcatgcc 1104
>dbj|AK105417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A05, full insert sequence Length = 2455 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 441 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 500 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 501 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 560 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 561 aggcagtgttggtgcagattgcaaa 585 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 221 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 280 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 281 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 340 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 341 actgttgggataaagatcatgcc 363
>dbj|AK101207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031A01, full insert sequence Length = 3122 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 235 agcagtttgaggggaagactgtgttgctcggtatggatgatatggatatctttaaaggga 294 |||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| |||| Sbjct: 1183 agcagtttgatgggaagactgtcatgctcggtgtggatgatatggacatatttaagggga 1242 Query: 295 tcaatttgaagcttcttgcctttgagaatatgctgaggacacaccccaagtggcagggac 354 | ||| |||| ||||||| |||||| | ||||||||||||||||| || |||||| | Sbjct: 1243 ttaatctgaaagttcttgcgtttgagcagatgctgaggacacacccaaaatggcagcgca 1302 Query: 355 gagcagtgttggtgcagattgcaaa 379 ||||||||||||||||||||||| Sbjct: 1303 aggcagtgttggtgcagattgcaaa 1327 Score = 101 bits (51), Expect = 2e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 15 gatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagtagg 74 ||||| || ||||||||||| || |||||||| |||||||||| || |||||||| || Sbjct: 963 gatctgattgggttccacacctttgattacgcgcggcatttcctgtcctgctgcagccgg 1022 Query: 75 atgctgggaatcgaataccagtccaagcgtggatacattggattggagtactttggccgc 134 |||||||| ||||| |||||||| ||| | ||||| || || | || |||||||||||| Sbjct: 1023 atgctggggatcgagtaccagtcgaagaggggatatatcggtctcgattactttggccgc 1082 Query: 135 actgttgggatcaaaatcatgcc 157 ||||||||||| || |||||||| Sbjct: 1083 actgttgggataaagatcatgcc 1105
>gb|AY166671.2| Cypripedium parviflorum var. pubescens trehalose-6-phosphate synthase/phosphatase (Tps) mRNA, partial cds Length = 2219 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 54 ttcctctcatgctgcagtaggatgctgggaatcgaataccagtccaagcgtggatacatt 113 |||||||| ||||||||| ||||||| ||||| || || |||||||||||||| || ||| Sbjct: 343 ttcctctcctgctgcagtcggatgcttggaatggagtatcagtccaagcgtggctatatt 402 Query: 114 ggattggagtactttggccgcactgttgggatcaaaatcatgccggtggg 163 || | || |||||||||||||| || || ||||| |||||||||||||| Sbjct: 403 ggcctcgactactttggccgcaccgtcggcatcaagatcatgccggtggg 452 Score = 42.1 bits (21), Expect = 1.3 Identities = 81/101 (80%) Strand = Plus / Plus Query: 252 actgtgttgctcggtatggatgatatggatatctttaaagggatcaatttgaagcttctt 311 ||||| ||||| ||| | ||||| ||||| || || ||||| |||||| | ||||| ||| Sbjct: 540 actgttttgcttggtgttgatgacatggacattttcaaaggcatcaatctcaagctcctt 599 Query: 312 gcctttgagaatatgctgaggacacaccccaagtggcaggg 352 || |||||| | ||||| | || ||| ||||||||||||| Sbjct: 600 gcatttgagcagatgctcaagatacattccaagtggcaggg 640
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 21 atcgggttccacactttcgattacgccaggcatttcctctcatgctg 67 |||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 13822182 atcgggttccacaccttcgattatgccaggcatttcctgtcctgctg 13822228 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 270 gatgatatggatatctttaaagggatca 297 ||||||||||||||||| |||||||||| Sbjct: 12592783 gatgatatggatatcttcaaagggatca 12592756 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 tgccggtgggagttcatatggatcagttgcagtcggt 190 ||||||||||||||||| |||| ||| ||| |||||| Sbjct: 13822315 tgccggtgggagttcatttggagcagctgcggtcggt 13822351 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 catttcctctcatgctgcag 70 |||||||||||||||||||| Sbjct: 12921369 catttcctctcatgctgcag 12921350
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 21 atcgggttccacactttcgattacgccaggcatttcctctcatgctg 67 |||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 71666 atcgggttccacaccttcgattatgccaggcatttcctgtcctgctg 71712 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 tgccggtgggagttcatatggatcagttgcagtcggt 190 ||||||||||||||||| |||| ||| ||| |||||| Sbjct: 71799 tgccggtgggagttcatttggagcagctgcggtcggt 71835
>dbj|AK105382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B06, full insert sequence Length = 4111 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 21 atcgggttccacactttcgattacgccaggcatttcctctcatgctg 67 |||||||||||||| |||||||| |||||||||||||| || ||||| Sbjct: 1524 atcgggttccacaccttcgattatgccaggcatttcctgtcctgctg 1570 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 154 tgccggtgggagttcatatggatcagttgcagtcggt 190 ||||||||||||||||| |||| ||| ||| |||||| Sbjct: 1657 tgccggtgggagttcatttggagcagctgcggtcggt 1693
>ref|NM_105697.2| Arabidopsis thaliana ATTPS8; transferase, transferring glycosyl groups AT1G70290 (ATTPS8) mRNA, complete cds Length = 3017 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 ggtatggatgatatggatatctttaaagggat 295 ||||| |||||||||||||| ||||||||||| Sbjct: 1249 ggtatcgatgatatggatatatttaaagggat 1280 Score = 48.1 bits (24), Expect = 0.021 Identities = 42/48 (87%) Strand = Plus / Plus Query: 9 aattgtgatctcatcgggttccacactttcgattacgccaggcatttc 56 |||||||||||||| || ||||| || || |||||||| ||||||||| Sbjct: 994 aattgtgatctcattggtttccatacgtttgattacgcgaggcatttc 1041
>gb|AF155150.1| Arabidopsis thaliana trehalose-6-phosphate synthase 2 (TPS2) mRNA, complete cds Length = 2481 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 ggtatggatgatatggatatctttaaagggat 295 ||||| |||||||||||||| ||||||||||| Sbjct: 919 ggtatcgatgatatggatatatttaaagggat 950 Score = 48.1 bits (24), Expect = 0.021 Identities = 42/48 (87%) Strand = Plus / Plus Query: 9 aattgtgatctcatcgggttccacactttcgattacgccaggcatttc 56 |||||||||||||| || ||||| || || |||||||| ||||||||| Sbjct: 664 aattgtgatctcattggtttccatacgtttgattacgcgaggcatttc 711
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 270 gatgatatggatatctttaaagggatca 297 ||||||||||||||||| |||||||||| Sbjct: 58721 gatgatatggatatcttcaaagggatca 58694
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 270 gatgatatggatatctttaaagggatca 297 ||||||||||||||||| |||||||||| Sbjct: 108110 gatgatatggatatcttcaaagggatca 108083
>dbj|AK067023.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092M02, full insert sequence Length = 1834 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 270 gatgatatggatatctttaaagggatca 297 ||||||||||||||||| |||||||||| Sbjct: 1304 gatgatatggatatcttcaaagggatca 1331
>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence Length = 92128 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 264 ggtatggatgatatggatatctttaaagggat 295 ||||| |||||||||||||| ||||||||||| Sbjct: 81546 ggtatcgatgatatggatatatttaaagggat 81577 Score = 48.1 bits (24), Expect = 0.021 Identities = 42/48 (87%) Strand = Plus / Plus Query: 9 aattgtgatctcatcgggttccacactttcgattacgccaggcatttc 56 |||||||||||||| || ||||| || || |||||||| ||||||||| Sbjct: 81291 aattgtgatctcattggtttccatacgtttgattacgcgaggcatttc 81338
>emb|AL022157.1|HS323P24 Human DNA sequence from clone RP3-323P24 on chromosome Xp11.21-11.23 Contains the gene for spindlin-like protein 2 (SPIN2), the gene for a novel protein similar to SPIN2 and a novel gene, complete sequence Length = 80611 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 aagcttcttgcctttgagaata 324 |||||||||||||||||||||| Sbjct: 22064 aagcttcttgcctttgagaata 22043
>emb|Z82211.1|HS447N6 Human DNA sequence from clone RP3-447N6 on chromosome X, complete sequence Length = 132229 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 aagcttcttgcctttgagaata 324 |||||||||||||||||||||| Sbjct: 121601 aagcttcttgcctttgagaata 121622
>ref|NM_127426.2| Arabidopsis thaliana ATTPS11; transferase, transferring glycosyl groups AT2G18700 (ATTPS11) mRNA, complete cds Length = 2800 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 27 ttccacactttcgattacgccaggcatttcctctcatgctgcagtaggatgct 79 |||||||| || |||||||| ||||||||| | || || || ||||||||||| Sbjct: 751 ttccacacgtttgattacgctaggcatttcttgtcttgttgtagtaggatgct 803
>gb|AC005026.2| Homo sapiens BAC clone GS1-489L14 from 7, complete sequence Length = 123526 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ttcctctcatgctgcagtagg 74 ||||||||||||||||||||| Sbjct: 191 ttcctctcatgctgcagtagg 171
>gb|AC005028.2| Homo sapiens BAC clone GS1-539F22 from 7, complete sequence Length = 189279 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ttcctctcatgctgcagtagg 74 ||||||||||||||||||||| Sbjct: 189270 ttcctctcatgctgcagtagg 189250
>emb|CR734292.2|CNS0GTCZ Tetraodon nigroviridis full-length cDNA Length = 1952 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 gcagcagtttgaggggaagactgtg 257 ||||||||||||| ||||||||||| Sbjct: 1620 gcagcagtttgagaggaagactgtg 1596
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 27 ttccacactttcgattacgccaggcatttcctctcatgctgcagtaggatgct 79 |||||||| || |||||||| ||||||||| | || || || ||||||||||| Sbjct: 29666 ttccacacgtttgattacgctaggcatttcttgtcttgttgtagtaggatgct 29718
>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence Length = 134793 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gaggacacaccccaagtggca 349 ||||||||||||||||||||| Sbjct: 20019 gaggacacaccccaagtggca 19999
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 tctttaaagggatcaatttgaagct 307 |||||||||| |||||||||||||| Sbjct: 147877 tctttaaaggcatcaatttgaagct 147901
>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069, complete sequence Length = 103659 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 27 ttccacactttcgattacgccaggcatttcctctcatgctgcagtaggatgct 79 |||||||| || ||||| || |||||||| ||||| || || ||||||||||| Sbjct: 9953 ttccacacatttgattatgcaaggcattttctctcttgttgtagtaggatgct 10005
>ref|NM_102235.2| Arabidopsis thaliana ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase AT1G23870 (ATTPS9) mRNA, complete cds Length = 2973 Score = 40.1 bits (20), Expect = 5.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 12 tgtgatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagt 71 ||||||||||| || |||||||| || ||||| || | ||||| | |||||||||||| Sbjct: 982 tgtgatctcattggcttccacacatttgattatgcacgccattttttgtcatgctgcagt 1041 Query: 72 aggatgct 79 || ||||| Sbjct: 1042 agaatgct 1049
>gb|AY438028.1| Lycopersicon pennellii bacterial spot disease resistance protein 4 (Bs4) gene, bs4-pen2963 allele, exons 1 through 4 and partial sequence Length = 3986 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 atcaatttgaagcttcttgc 313 |||||||||||||||||||| Sbjct: 1014 atcaatttgaagcttcttgc 1033
>gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, complete sequence Length = 196086 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 ctttaaagggatcaatttgaagct 307 |||||||| ||||||||||||||| Sbjct: 82948 ctttaaagtgatcaatttgaagct 82925
>ref|XM_948656.1| Theileria annulata strain Ankara hypothetical protein (TA16900) partial mRNA Length = 2196 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ttggattggagtactttggccgca 135 |||| ||||||||||||||||||| Sbjct: 356 ttggtttggagtactttggccgca 333
>gb|AY884150.1| Ginkgo biloba trehalose-6-phosphate synthase mRNA, complete cds Length = 2743 Score = 40.1 bits (20), Expect = 5.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 27 ttccacactttcgattacgccaggcatttcctctcatgctgcagtaggatgctggg 82 ||||| || ||||| || || |||||||| || || |||||||| ||||||||||| Sbjct: 778 ttccataccttcgactatgcgaggcattttctatcctgctgcagcaggatgctggg 833
>gb|BT009244.1| Triticum aestivum clone wlk1.pk0017.e10:fis, full insert mRNA sequence Length = 2511 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 tcgaataccagtccaagcgtggatacat 112 |||| |||||||||||||| |||||||| Sbjct: 400 tcgactaccagtccaagcgcggatacat 427
>gb|AY096366.1| Arabidopsis thaliana putative trehalose 6-phosphate synthase (At1g23870) mRNA, complete cds Length = 2635 Score = 40.1 bits (20), Expect = 5.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 12 tgtgatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagt 71 ||||||||||| || |||||||| || ||||| || | ||||| | |||||||||||| Sbjct: 763 tgtgatctcattggcttccacacatttgattatgcacgccattttttgtcatgctgcagt 822 Query: 72 aggatgct 79 || ||||| Sbjct: 823 agaatgct 830
>gb|AY072210.1| Arabidopsis thaliana putative trehalose 6-phosphate synthase (At1g23870) mRNA, complete cds Length = 2987 Score = 40.1 bits (20), Expect = 5.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 12 tgtgatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagt 71 ||||||||||| || |||||||| || ||||| || | ||||| | |||||||||||| Sbjct: 983 tgtgatctcattggcttccacacatttgattatgcacgccattttttgtcatgctgcagt 1042 Query: 72 aggatgct 79 || ||||| Sbjct: 1043 agaatgct 1050
>gb|AC151818.2| Xenopus tropicalis clone ISB1-133E21, complete sequence Length = 96546 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agctgcagcagcagtttgag 245 |||||||||||||||||||| Sbjct: 11144 agctgcagcagcagtttgag 11125
>gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete sequence Length = 137377 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tgctcaattgtgatctcatc 23 |||||||||||||||||||| Sbjct: 71715 tgctcaattgtgatctcatc 71696
>gb|AF273493.1| Carassius auratus cyclin A2 mRNA, complete cds Length = 1923 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agctgcagcagcagtttgag 245 |||||||||||||||||||| Sbjct: 1335 agctgcagcagcagtttgag 1316
>gb|AF273492.1| Carassius auratus gibelio cyclin A2 mRNA, complete cds Length = 1874 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agctgcagcagcagtttgag 245 |||||||||||||||||||| Sbjct: 1328 agctgcagcagcagtttgag 1309
>gb|AC002423.3|AC002423 Genomic sequence for Arabidopsis thaliana BAC T23E23, complete sequence Length = 99254 Score = 40.1 bits (20), Expect = 5.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 12 tgtgatctcatcgggttccacactttcgattacgccaggcatttcctctcatgctgcagt 71 ||||||||||| || |||||||| || ||||| || | ||||| | |||||||||||| Sbjct: 7936 tgtgatctcattggcttccacacatttgattatgcacgccattttttgtcatgctgcagt 7995 Query: 72 aggatgct 79 || ||||| Sbjct: 7996 agaatgct 8003
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 catttcctctcatgctgcag 70 |||||||||||||||||||| Sbjct: 83353 catttcctctcatgctgcag 83334
>gb|AY884151.1| Ginkgo biloba trehalose-6-phosphate synthase gene, complete cds Length = 4047 Score = 40.1 bits (20), Expect = 5.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 27 ttccacactttcgattacgccaggcatttcctctcatgctgcagtaggatgctggg 82 ||||| || ||||| || || |||||||| || || |||||||| ||||||||||| Sbjct: 1905 ttccataccttcgactatgcgaggcattttctatcctgctgcagcaggatgctggg 1960
>emb|AL607109.21| Mouse DNA sequence from clone RP23-352D7 on chromosome 4, complete sequence Length = 187252 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ctctcatgctgcagtaggat 76 |||||||||||||||||||| Sbjct: 155091 ctctcatgctgcagtaggat 155110
>emb|AL672144.8| Mouse DNA sequence from clone RP23-40H13 on chromosome X, complete sequence Length = 85651 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ctgcagcagcagtttgaggg 247 |||||||||||||||||||| Sbjct: 46943 ctgcagcagcagtttgaggg 46924 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,071,921 Number of Sequences: 3902068 Number of extensions: 3071921 Number of successful extensions: 69567 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 69411 Number of HSP's gapped (non-prelim): 149 length of query: 388 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 366 effective length of database: 17,147,199,772 effective search space: 6275875116552 effective search space used: 6275875116552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)