ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21o01 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 100 bits (249), Expect = 2e-21 Identities = 51/56 (91%), Positives = 54/56 (96%), Gaps = 1/56 (1%) Frame = +3 Query: 321 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGR 485 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGR Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGR 88
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 97.1 bits (240), Expect = 2e-20 Identities = 47/48 (97%), Positives = 48/48 (100%) Frame = +3 Query: 342 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGR 485 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGR Sbjct: 52 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGR 99
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 94.7 bits (234), Expect = 1e-19 Identities = 45/49 (91%), Positives = 48/49 (97%) Frame = +3 Query: 339 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGR 485 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGR Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGR 94
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 65.5 bits (158), Expect = 7e-11 Identities = 28/39 (71%), Positives = 37/39 (94%) Frame = +3 Query: 369 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGR 485 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGR Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGR 41
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 54.7 bits (130), Expect = 1e-07 Identities = 22/37 (59%), Positives = 30/37 (81%) Frame = +3 Query: 372 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I ++PSILSA+FA G +++A+E G DW+HVDVMDG Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDG 43
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/37 (64%), Positives = 29/37 (78%) Frame = +3 Query: 372 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I V+PSILSA+FA LG ++K VE G D IH+DVMDG Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDG 38
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 49.3 bits (116), Expect = 5e-06 Identities = 23/40 (57%), Positives = 31/40 (77%) Frame = +3 Query: 360 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMD 51
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 49.3 bits (116), Expect = 5e-06 Identities = 23/40 (57%), Positives = 31/40 (77%) Frame = +3 Query: 360 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMD 51
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 48.9 bits (115), Expect = 7e-06 Identities = 22/34 (64%), Positives = 29/34 (85%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMD 36
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/36 (55%), Positives = 28/36 (77%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I++PSIL+++FA LG + V AG DW+H+DVMDG Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDG 40
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 47.0 bits (110), Expect = 3e-05 Identities = 19/46 (41%), Positives = 31/46 (67%) Frame = +3 Query: 345 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDG 47
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/36 (55%), Positives = 29/36 (80%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDG 42
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/36 (55%), Positives = 29/36 (80%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDG 42
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 45.8 bits (107), Expect = 6e-05 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 ++PSILSA+FA+LGE +K V AG D IH DVMD Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMD 39
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 ++ SILSA+FA+LGE K AG DWIH DVMD Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMD 39
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/40 (45%), Positives = 28/40 (70%) Frame = +3 Query: 363 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDG 43
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 44.7 bits (104), Expect = 1e-04 Identities = 20/36 (55%), Positives = 29/36 (80%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDG 37
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 44.3 bits (103), Expect = 2e-04 Identities = 18/36 (50%), Positives = 28/36 (77%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I++PSIL+++FA LG + V +G +W+H+DVMDG Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDG 40
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 43.5 bits (101), Expect = 3e-04 Identities = 17/40 (42%), Positives = 29/40 (72%) Frame = +3 Query: 363 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDG 42
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/35 (57%), Positives = 26/35 (74%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+FA+LGE V AG D +H DVMD Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMD 39
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+FA+LGE AG D +H DVMD Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMD 39
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+FA+LGE AG D +H DVMD Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMD 39
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+FA+LGE AG D +H DVMD Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMD 39
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+FA+LGE AG D +H DVMD Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMD 39
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +3 Query: 372 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I + SILSA+F L E++K E AG D+ HVD+MDG Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDG 38
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 42.4 bits (98), Expect = 7e-04 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 +++PSILSA+ A+LG+ V+ V AG D IH DVMD Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMD 39
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/35 (54%), Positives = 26/35 (74%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 ++S S+LSANF++LGE + V +G D IH DVMD Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMD 39
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 40.8 bits (94), Expect = 0.002 Identities = 18/36 (50%), Positives = 26/36 (72%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 I++PSIL+++FA L V AG +W+H+DVMDG Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDG 40
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 40.8 bits (94), Expect = 0.002 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 ++PS+LS++FA L + + G DW+H+D+MDG Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDG 43
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 40.4 bits (93), Expect = 0.003 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 ++PS+LSA+F+ L + +E G W+H+DVMDG Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDG 41
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 39.7 bits (91), Expect = 0.004 Identities = 16/36 (44%), Positives = 26/36 (72%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGR 485 ++PS+L+ +FA L ++V + G DW+HVDVMD + Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQ 41
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 38.1 bits (87), Expect = 0.013 Identities = 18/35 (51%), Positives = 28/35 (80%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 V+PS+LSA+F L +++++V A D++HVDVMDG Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDG 35
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 38.1 bits (87), Expect = 0.013 Identities = 18/35 (51%), Positives = 28/35 (80%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 V+PS+LSA+F L +++++V A D++HVDVMDG Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDG 35
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 37.4 bits (85), Expect = 0.021 Identities = 16/36 (44%), Positives = 26/36 (72%) Frame = +3 Query: 375 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 +++PSIL+ ++ +GEQ++A G D +H DVMDG Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDG 38
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 37.0 bits (84), Expect = 0.028 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 + PSIL+++ A LG + + +G D++H+DVMDG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDG 41
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 37.0 bits (84), Expect = 0.028 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 + PSIL+++ A LG + + +G D++H+DVMDG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDG 41
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 37.0 bits (84), Expect = 0.028 Identities = 15/35 (42%), Positives = 25/35 (71%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 + PSIL+++ A LG + + +G D++H+DVMDG Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDG 41
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 32.3 bits (72), Expect = 0.69 Identities = 12/35 (34%), Positives = 24/35 (68%) Frame = +3 Query: 378 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDG 482 +SPS++ + K EQ++ ++ + D+ H+D+MDG Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDG 36
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +3 Query: 339 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 476 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +3 Query: 339 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 476 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +3 Query: 372 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 I ++PS+LSA+FA + + G D +H DVMD Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMD 40
>TRIB3_MOUSE (Q8K4K2) Tribbles homolog 3 (TRB-3) (Neuronal cell death-inducible| putative kinase) Length = 354 Score = 29.3 bits (64), Expect = 5.8 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +3 Query: 15 VRLRLAPGDSPLLLPPTPPGRA----RVAPTHQIGP 110 VR PG P LLPP+PP + VAP ++GP Sbjct: 35 VRDEPEPGPLPSLLPPSPPPASDLSPAVAPATRLGP 70
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +3 Query: 6 TGAVRLRLAPGDSPLLLPPTPPGRARVAPTHQIGPALP 119 +G+ + APG P PP +A +APT P P Sbjct: 504 SGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAP 541
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +3 Query: 24 RLAPGDSPLLLPPTPPGRARVAPTHQIGPALPFHSIRQGL 143 R P DSP L PTPP +V+ + P+ S Q L Sbjct: 2793 RAPPPDSPTSLVPTPPLAPQVSQASTLSPSTSSMSANQAL 2832
>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1| Length = 965 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -1 Query: 149 DEQPLANGMEWKRWADLVGGGYARAPGRSRGEEEGGIAG 33 D + + NG KR L GGG A G S G+ +GG G Sbjct: 266 DVKAMFNGGTRKRTFSLQGGGGGGANGGSGGQGKGGAGG 304
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 387 SILSANFAKLGEQVKAVEVAGCDWIHVDVMD 479 SIL NF L E++ ++ G IH+DVMD Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMD 43
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +3 Query: 27 LAPGDSPLLLPPTPPGRARVAPTHQIGPALPFH 125 L P P PP PP + AP HQ PA H Sbjct: 72 LPPHPPPPPPPPPPPPQHLAAPAHQPQPAAQLH 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,764,833 Number of Sequences: 219361 Number of extensions: 908482 Number of successful extensions: 4236 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4165 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
