ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21o01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470294.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1340 Score = 232 bits (117), Expect = 9e-58 Identities = 193/218 (88%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 326 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 142 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 195 Query: 327 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 383 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 196 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 255 Query: 384 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 443 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 256 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 315 Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 316 gcaggatgtgactggattcatgttgatgtcatggatgg 353
>dbj|AK099215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084F18, full insert sequence Length = 1122 Score = 232 bits (117), Expect = 9e-58 Identities = 193/218 (88%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 326 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 98 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 151 Query: 327 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 383 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 152 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 211 Query: 384 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 443 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 212 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 271 Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 272 gcaggatgtgactggattcatgttgatgtcatggatgg 309
>dbj|AK066306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061C21, full insert sequence Length = 1276 Score = 232 bits (117), Expect = 9e-58 Identities = 193/218 (88%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 326 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 131 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 184 Query: 327 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 383 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 185 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 244 Query: 384 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 443 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 245 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 304 Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 305 gcaggatgtgactggattcatgttgatgtcatggatgg 342
>dbj|AK061772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C12, full insert sequence Length = 1113 Score = 232 bits (117), Expect = 9e-58 Identities = 193/218 (88%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 326 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 114 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 167 Query: 327 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 383 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 168 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 227 Query: 384 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 443 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 228 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 287 Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 288 gcaggatgtgactggattcatgttgatgtcatggatgg 325
>gb|AF047444.1|AF047444 Oryza sativa ribulose-5-phosphate-3-epimerase (RPE) mRNA, complete cds Length = 1050 Score = 232 bits (117), Expect = 9e-58 Identities = 193/218 (88%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgccgccgcgtcggcttctcctcgtccaggaagcta 326 ||||||||||||||||||||| |||||| ||| |||||||||| ||||||| | Sbjct: 142 ccgcgcgccgcctccctcggccgccgcc------tcgccttctcctcgcccaggaaagca 195 Query: 327 ttccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtcc 383 |||| ||||||||||||| ||||| ||||||||||| |||| |||||||| |||||| Sbjct: 196 ttccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtcc 255 Query: 384 ccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtg 443 ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| Sbjct: 256 ccttccattctttctgcaaacttttccaagcttggcgagcaggtaaaagctgtggaggtg 315 Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 316 gcaggatgtgactggattcatgttgatgtcatggatgg 353
>gb|AY106663.1| Zea mays PCO117644 mRNA sequence Length = 1461 Score = 200 bits (101), Expect = 3e-48 Identities = 226/267 (84%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 222 cagatggcgtcgccctcctcctcgctctgctccagcctcggctacccgcgcgccgcctcc 281 ||||||||| |||| || || ||||| ||||||||| ||| || || ||| |||||||| Sbjct: 259 cagatggcgacgccgtcgtcgtcgctttgctccagcttcgcctccctgcggaccgcctcc 318 Query: 282 ctcggcggccgccgccgcgtcggcttctcctcgtccaggaagctattccaagtgagggca 341 ||||| || ||| || ||| || |||| || |||||||| |||||| ||||||||| Sbjct: 319 atcggccacccccgtggcatcgcctcctccacgcccaggaaggcattccatgtgagggca 378 Query: 342 tcaa---gggtcgacaagttctccaagagcgacatcattgtgtccccttccattctctct 398 ||| |||| ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 379 tcagctcgggttgacaaattctcaaagagtgacatcatcgtgtccccttcgattctgtct 438 Query: 399 gcaaactttgccaagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactgg 458 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 439 gcaaactttgcgaagcttggtgatcaggtaaaagctgtggaggtggcaggatgcgactgg 498 Query: 459 attcatgttgatgtcatggatgggcgc 485 ||||||||||||||||||||||||||| Sbjct: 499 attcatgttgatgtcatggatgggcgc 525
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 9e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 326 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 382 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 3696384 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 3696443 Query: 383 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 427 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 3696444 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 3696488 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 424 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgg 481 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3696633 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatgg 3696690 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgcc 294 ||||||||||||||||||||| |||||| Sbjct: 3695794 ccgcgcgccgcctccctcggccgccgcc 3695821 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cattccattccattcgccaa 137 |||||||||||||||||||| Sbjct: 5164241 cattccattccattcgccaa 5164222
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 109 bits (55), Expect = 9e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 326 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 382 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 84993 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 84934 Query: 383 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 427 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 84933 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 84889 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Minus Query: 424 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgg 481 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84744 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatgg 84687 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 267 ccgcgcgccgcctccctcggcggccgcc 294 ||||||||||||||||||||| |||||| Sbjct: 85583 ccgcgcgccgcctccctcggccgccgcc 85556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 9e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 326 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 382 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 3696495 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 3696554 Query: 383 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 427 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 3696555 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 3696599 Score = 107 bits (54), Expect = 3e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 424 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgg 481 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3696744 aggtaaaagctgtggaggtggcaggatgtgactggattcatgttgatgtcatggatgg 3696801 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 267 ccgcgcgccgcctccctcggcggccgcc 294 ||||||||||||||||||||| |||||| Sbjct: 3695905 ccgcgcgccgcctccctcggccgccgcc 3695932 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cattccattccattcgccaa 137 |||||||||||||||||||| Sbjct: 5163456 cattccattccattcgccaa 5163437
>dbj|AK064675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F02, full insert sequence Length = 1689 Score = 109 bits (55), Expect = 9e-21 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 326 attccaagtgagggcatca---agggtcgacaagttctccaagagcgacatcattgtgtc 382 ||||| ||||||||||||| ||||| ||||||||||| |||| |||||||| ||||| Sbjct: 700 attccgagtgagggcatcatccagggttgacaagttctcgaagaatgacatcatcgtgtc 641 Query: 383 cccttccattctctctgcaaactttgccaagcttggcgaacaggt 427 |||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 640 cccttccattctttctgcaaacttttccaagcttggcgagcaggt 596 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 267 ccgcgcgccgcctccctcggcggccgcc 294 ||||||||||||||||||||| |||||| Sbjct: 1063 ccgcgcgccgcctccctcggccgccgcc 1036
>gb|AF070943.1| Expression vector pFL506 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase mature form Length = 849 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 410 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 116 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 175 Query: 411 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 470 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 176 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 235 Query: 471 gtcatggatgg 481 || |||||||| Sbjct: 236 gtaatggatgg 246
>gb|AF070942.1| Expression vector pFL505 for Spinacia oleracea chloroplast ribulose-phosphate 3-epimerase transit form Length = 993 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 410 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 260 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 319 Query: 411 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 470 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 320 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 379 Query: 471 gtcatggatgg 481 || |||||||| Sbjct: 380 gtaatggatgg 390
>gb|AF070941.1| Spinacia oleracea ribulose-phosphate 3-epimerase (RPE) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1230 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 410 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 225 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 284 Query: 411 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 470 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 285 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 344 Query: 471 gtcatggatgg 481 || |||||||| Sbjct: 345 gtaatggatgg 355
>gb|L42328.1|SPIR5P3E Spinacia oleracea nuclear-encoded chloroplast ribulose-5-phosphate 3-epimerase mRNA, complete cds Length = 1198 Score = 93.7 bits (47), Expect = 5e-16 Identities = 110/131 (83%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 410 ||||||||||| || |||||||||||| || || || ||||||||||| |||||||| Sbjct: 217 gacaagttctctaaatccgacatcattgtctctccatctattctctctgctaactttgca 276 Query: 411 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 470 ||| | || || ||||||||||| ||||| |||| || ||||| ||||||||||||||| Sbjct: 277 aagttgggtgagcaggtaaaagcagttgaattggctggttgtgattggattcatgttgat 336 Query: 471 gtcatggatgg 481 || |||||||| Sbjct: 337 gtaatggatgg 347
>emb|BX832544.1|CNS0A11A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 413 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 472 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || |||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 473 gcagttgagttggcaggttgtgattggattcatgttgatgtcatgga 519
>ref|NM_125534.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.2 mRNA, complete cds Length = 1271 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 310 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 369 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 370 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 416
>ref|NM_180909.2| Arabidopsis thaliana RPE; ribulose-phosphate 3-epimerase AT5G61410 (RPE) transcript variant AT5G61410.1 mRNA, complete cds Length = 1408 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 441 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 500 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 501 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 547
>gb|AY091381.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 877 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 172 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 231 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 232 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 278
>gb|AY045855.1| Arabidopsis thaliana putative ribulose-5-phosphate-3-epimerase (At5g61410) mRNA, complete cds Length = 1280 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 304 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 363 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 364 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 410
>emb|BX830111.1|CNS0A1DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 401 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 460 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 461 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 507
>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1311 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 401 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 460 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 461 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 507
>emb|BX832763.1|CNS0A101 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 412 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 471 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 472 gcagtagagttggcaggttgtgattggattcatgttgatgtcatgga 518
>emb|BX832214.1|CNS0A123 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 441 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 500 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 501 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 547
>gb|AF015274.1|AF015274 Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1259 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 372 atcattgtgtccccttccattctctctgcaaactttgccaagcttggcgaacaggtaaaa 431 |||||||| || || || |||||||| || || || ||||| | ||||| ||||||||| Sbjct: 277 atcattgtttctccctctattctctcggctaatttcgccaaattaggcgagcaggtaaaa 336 Query: 432 gctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 || || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 337 gcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 383
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13 Length = 80376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 423 caggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 ||||||||||| || ||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 55814 caggtaaaagcagtggagttggcaggttgtgattggattcatgttgatgtcatgga 55759
>dbj|AP004930.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13G01, TM0093a, complete sequence Length = 42990 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 424 aggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatggatgg 481 |||| ||||| || ||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 845 aggttaaagcagtggagttggcaggttgtgattggattcatgttgatgtcatggatgg 902
>gb|BT014306.1| Lycopersicon esculentum clone 133557F, mRNA sequence Length = 1257 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 354 aagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgccaag 413 |||||||| || |||||||| ||||| || || ||||| || ||||| |||||| | || Sbjct: 299 aagttctcgaaaagcgacattattgtttctccatccatcctttctgctaacttttctaaa 358 Query: 414 cttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtc 473 | || || ||||| ||||| |||||| |||||| || |||||||||||||| ||||| Sbjct: 359 ttaggagagcaggtgaaagcagttgagcaggcaggctgcgactggattcatgtagatgtg 418 Query: 474 atggatgg 481 |||||||| Sbjct: 419 atggatgg 426
>gb|AF369887.1| Pisum sativum ribulose-5-phosphate-3-epimerase mRNA, complete cds Length = 1156 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgcc 410 |||||||| || || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 174 gacaagttttcaaaaagcgatatcattgtttctccatctattctttccgccaactttgca 233 Query: 411 aagcttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgat 470 || | || |||||||||||||| || ||| |||| || ||||| ||||||||| ||||| Sbjct: 234 aaattgggagaacaggtaaaagcagtggagttggctggttgtgattggattcatattgat 293 Query: 471 gtcatgga 478 || ||||| Sbjct: 294 gttatgga 301
>emb|AJ297425.1|DCA297425 Daucus carota chloroplast partial mRNA for putative ribulose-phosphate 3-epimerase (rpe gene) Length = 128 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 443 ggcaggatgtgactggattcatgttgatgtcatggatgg 481 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 2 ggcaggttgtgactggatacatgttgatgtcatggatgg 40
>emb|Z50098.1|STPPEPIMR S.tuberosum mRNA for pentose-5-phosphate-3-epimerase Length = 1055 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 354 aagttctccaagagcgacatcattgtgtccccttccattctctctgcaaactttgccaag 413 |||||||| || |||||||| ||||| || || ||||| || ||||| |||||| | || Sbjct: 153 aagttctcaaaaagcgacattattgtttctccgtccatcctttctgctaacttttctaaa 212 Query: 414 cttggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtc 473 | || || ||||| ||||| ||||| |||||| ||||||||||||||||| ||||| Sbjct: 213 ttaggagagcaggtgaaagcaattgagcaggcaggctgtgactggattcatgtagatgtg 272 Query: 474 atgga 478 ||||| Sbjct: 273 atgga 277
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 444 gcaggatgtgactggattcatgttgatgtcatggatgg 481 ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 89369 gcaggctgtgattggattcatgttgatgtgatggatgg 89406
>emb|BX831851.1|CNS0A0WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 423 caggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatgga 478 ||||||| ||| |||||| ||||||| ||| | || |||||||||||||| ||||| Sbjct: 507 caggtaagagcagttgagttggcaggttgtcattgcattcatgttgatgtgatgga 562
>gb|AY386314.1| Bacillus methanolicus strain MGA3 plasmid pBM19, complete sequence Length = 19167 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 459 attcatgttgatgtcatggatgg 481 ||||||||||||||||||||||| Sbjct: 4445 attcatgttgatgtcatggatgg 4467
>gb|AC110072.3| Homo sapiens BAC clone RP11-18C16 from 4, complete sequence Length = 188672 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgccaa 137 ||||||||||||||||||||||| Sbjct: 56359 ttccattccattccattcgccaa 56337
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tgactggattcatgttgatgtcatggatgg 481 |||||||||||| |||||||| |||||||| Sbjct: 1190907 tgactggattcacgttgatgtgatggatgg 1190936
>ref|XM_463369.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 81 cggcggccgccgccgcgtcggc 60
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 68158 cggcggccgccgccgcgtcggc 68137
>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7 Length = 349323 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 453 gactggattcatgttgatgtcatgga 478 |||||||||||||| ||||||||||| Sbjct: 274433 gactggattcatgtggatgtcatgga 274458
>tpg|BK000838.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M239, complete sequence Length = 1387 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 868 cggcggccgccgccgcgtcggc 889
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 25192888 cggcggccgccgccgcgtcggc 25192867
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 25541136 cggcggccgccgccgcgtcggc 25541157 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 23379443 cggcggccgccgccgcgtcggc 23379464 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cccgcgcgccgcctccctcg 285 |||||||||||||||||||| Sbjct: 40855671 cccgcgcgccgcctccctcg 40855690 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ccgccgccgcgtcggcttctcctc 313 ||||||||||| |||||||||||| Sbjct: 27214317 ccgccgccgcggcggcttctcctc 27214294 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cgccgcctccctcggcggccgccgccgc 299 |||||||||| |||||||||||||||| Sbjct: 26385593 cgccgcctccgccggcggccgccgccgc 26385620 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 15462207 gcggccgccgccgcgtcggc 15462188
>emb|BX832443.1|CNS0A0ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 44.1 bits (22), Expect = 0.42 Identities = 52/62 (83%) Strand = Plus / Plus Query: 417 ggcgaacaggtaaaagctgttgaggtggcaggatgtgactggattcatgttgatgtcatg 476 ||||| ||||||| ||| || ||| |||||| ||||| || ||| |||||||||||||| Sbjct: 444 ggcgagcaggtaagagcagtagagtgggcaggttgtgattgtattgatgttgatgtcatg 503 Query: 477 ga 478 || Sbjct: 504 ga 505
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 462 catgttgatgtcatggatgggc 483 |||||||||||||||||||||| Sbjct: 1555978 catgttgatgtcatggatgggc 1555999
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 68739 cggcggccgccgccgcgtcggc 68760
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 105141 cggcggccgccgccgcgtcggc 105162
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 ttggcgaacaggtaaaagctgt 436 |||||||||||||||||||||| Sbjct: 124250 ttggcgaacaggtaaaagctgt 124271
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 1275530 cggcggccgccgccgcgtcggc 1275551
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcggc 305 |||||||||||||||||||||| Sbjct: 25511546 cggcggccgccgccgcgtcggc 25511525
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 tctgcaaactttgccaagcttggcga 421 |||||||||||||||||||| ||||| Sbjct: 2698127 tctgcaaactttgccaagctgggcga 2698102
>gb|AC024757.1| Caenorhabditis elegans cosmid Y37E11AL, complete sequence Length = 68130 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgcc 135 ||||||||||||||||||||| Sbjct: 11713 ttccattccattccattcgcc 11693
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 903 ggcggccgccgccgcgtcggc 883
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 912 ggcggccgccgccgcgtcggc 892
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 atgtgactggattcatgttgatgtc 473 ||||| ||||||||||||||||||| Sbjct: 77576 atgtgcctggattcatgttgatgtc 77600
>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence Length = 205515 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cgcttccattccattccattc 132 ||||||||||||||||||||| Sbjct: 69935 cgcttccattccattccattc 69955
>emb|CR956378.3| Pig DNA sequence from clone CH242-51F17 on chromosome 17, complete sequence Length = 103244 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattcg 133 ||||||||||||||||||||| Sbjct: 78154 gcttccattccattccattcg 78174
>gb|AC003683.2| Homo sapiens x BAC RP1-147H15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127683 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 387 tccattctctctgcaaactttgcca 411 |||||||||||| |||||||||||| Sbjct: 74341 tccattctctctccaaactttgcca 74365
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ggccgccgccgcgtcggcttc 308 ||||||||||||||||||||| Sbjct: 4044636 ggccgccgccgcgtcggcttc 4044656
>ref|NM_067993.1| Caenorhabditis elegans Y37E11AL.4 (Y37E11AL.4) mRNA, complete cds Length = 291 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgcc 135 ||||||||||||||||||||| Sbjct: 111 ttccattccattccattcgcc 91
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 cgccgccgcgtcggcttctcc 311 ||||||||||||||||||||| Sbjct: 10869675 cgccgccgcgtcggcttctcc 10869695
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 32580636 ggcggccgccgccgcgtcggc 32580616 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 25743808 cgtcggcttctcctcgtcca 25743789 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 19408517 cgtcggcttctcctcgtcca 19408536
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 cgccgccgcgtcggcttctcc 311 ||||||||||||||||||||| Sbjct: 93398 cgccgccgcgtcggcttctcc 93418
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccccacccaccaaatcggccc 109 ||||||||||||||||||||| Sbjct: 2490499 ccccacccaccaaatcggccc 2490479
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 cgccgccgcgtcggcttctcc 311 ||||||||||||||||||||| Sbjct: 9380 cgccgccgcgtcggcttctcc 9400
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 8007 ggcggccgccgccgcgtcggc 7987
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 77609 ggcggccgccgccgcgtcggc 77589
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 912 ggcggccgccgccgcgtcggc 892
>dbj|AK101995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079I19, full insert sequence Length = 1652 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 cgccgccgcgtcggcttctcc 311 ||||||||||||||||||||| Sbjct: 102 cgccgccgcgtcggcttctcc 122
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 903 ggcggccgccgccgcgtcggc 883
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 2596 ggcggccgccgccgcgtcggc 2576
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ggccgccgccgcgtcggcttc 308 ||||||||||||||||||||| Sbjct: 1782917 ggccgccgccgcgtcggcttc 1782937
>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcggccgccgccgcgtcggc 305 ||||||||||||||||||||| Sbjct: 895 ggcggccgccgccgcgtcggc 875
>ref|XM_466984.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 768 cgtcggcttctcctcgtcca 787
>ref|XM_466064.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 189 cgtcggcttctcctcgtcca 208
>ref|NM_193870.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 71 gcggccgccgccgcgtcggc 52
>ref|NM_191913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ccgccgccgcgtcggcttctcctc 313 ||||||||||| |||||||||||| Sbjct: 744 ccgccgccgcggcggcttctcctc 721
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cgccgcctccctcggcggccgccgccgc 299 |||||||||| |||||||||||||||| Sbjct: 123 cgccgcctccgccggcggccgccgccgc 150
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 522660 gcttccattccattccattc 522679
>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence Length = 152941 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 139211 gcttccattccattccattc 139230
>ref|XM_603465.2| PREDICTED: Bos taurus similar to Zinc finger protein 264 (LOC525119), mRNA Length = 1371 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ctcgctctgctccagcctcg 261 |||||||||||||||||||| Sbjct: 144 ctcgctctgctccagcctcg 125
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 269 gcgcgccgcctccctcggcggccgccgccgcg 300 ||||| |||||||||| || |||||||||||| Sbjct: 78466 gcgcgacgcctccctccgccgccgccgccgcg 78435
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 269 gcgcgccgcctccctcggcggccgccgccgcg 300 ||||| |||||||||| || |||||||||||| Sbjct: 40100 gcgcgacgcctccctccgccgccgccgccgcg 40069
>ref|XM_591851.2| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 1 (LOC514062), mRNA Length = 3890 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 48 ccctcggcggccgccgccgc 29
>ref|XM_882445.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 7 (LOC514062), mRNA Length = 3941 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882432.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 6 (LOC514062), mRNA Length = 3920 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882425.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 5 (LOC514062), mRNA Length = 3869 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_882418.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 4 (LOC514062), mRNA Length = 3124 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 45 ccctcggcggccgccgccgc 26
>ref|XM_869170.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 2 (LOC514062), mRNA Length = 3992 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 48 ccctcggcggccgccgccgc 29
>ref|XM_459544.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E05907g) partial mRNA Length = 762 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcga 370 |||||||||||||||||||| Sbjct: 310 gacaagttctccaagagcga 329
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 14815 gcttccattccattccattc 14834
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cctcggcggccgccgccgcgtcgg 304 |||||||||||||||| ||||||| Sbjct: 21286 cctcggcggccgccgcggcgtcgg 21263
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cctcggcggccgccgccgcgtcgg 304 |||||||||||||||| ||||||| Sbjct: 52086 cctcggcggccgccgcggcgtcgg 52063
>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence Length = 206979 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 140788 gcttccattccattccattc 140769
>emb|BX322639.2| Human DNA sequence from clone RP11-313J2 on chromosome 10 Contains a zinc finger protein pseudogene and a CpG island, complete sequence Length = 87299 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 23806 cttccattccattccattcg 23825 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 23612 cttccattccattccattcg 23631
>emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chromosome 10 Contains a CpG island, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 1449 gcttccattccattccattc 1468
>emb|AL590623.16| Human DNA sequence from clone RP11-96F8 on chromosome 10 Contains a N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2) pseudogene, complete sequence Length = 81908 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 6955 cttccattccattccattcg 6974
>ref|NM_147151.1| Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant short, mRNA Length = 3757 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11, complete sequence Length = 80387 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tcctcctcgctctgctccagcctc 260 |||||||| ||||||||||||||| Sbjct: 27182 tcctcctcactctgctccagcctc 27205
>emb|AL121723.36|HSJ854E16 Human DNA sequence from clone RP5-854E16 on chromosome 20 Contains a DKKL1-pending (soggy-1) (SGY-1) pseudogene and part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, complete sequence Length = 70452 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 4234 ttccattccattccattcgc 4215
>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the 3' end of a gene for a novel protein similar to 17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the gene for a novel protein similar to CDC10 cell division cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a novel gene containing FLJ14186, a capicua homolog (Drosophila) (CIC) pseudogene and a CpG island, complete sequence Length = 166835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 141487 cttccattccattccattcg 141468 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 138607 ttccattccattccattcgc 138588 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 135684 ttccattccattccattcgc 135665
>gb|AE008799.1| Salmonella typhimurium LT2, section 103 of 220 of the complete genome Length = 20617 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tggcgaacaggtaaaagctg 435 |||||||||||||||||||| Sbjct: 9873 tggcgaacaggtaaaagctg 9854
>gb|BC058357.1| Mus musculus euchromatic histone lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:6822432), partial cds Length = 3905 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 49 ccctcggcggccgccgccgc 30
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gacaagttctccaagagcga 370 |||||||||||||||||||| Sbjct: 435292 gacaagttctccaagagcga 435311
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cgcgcgccgcctccctcggc 287 |||||||||||||||||||| Sbjct: 270097 cgcgcgccgcctccctcggc 270078
>emb|AL627273.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 9/20 Length = 250050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tggcgaacaggtaaaagctg 435 |||||||||||||||||||| Sbjct: 236626 tggcgaacaggtaaaagctg 236607
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 74912 gcggccgccgccgcgtcggc 74893
>emb|AJ315532.1|HSA315532 Homo sapiens mRNA for NG36/G9a protein Length = 3633 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 31889 gcttccattccattccattc 31870
>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences Length = 193714 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 102251 cttccattccattccattcg 102270
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 5947015 cttccattccattccattcg 5947034
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 153885 cttccattccattccattcg 153904
>gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197964 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 124228 gcttccattccattccattc 124209
>dbj|AK056936.1| Homo sapiens cDNA FLJ32374 fis, clone SALGL1000047, highly similar to NG36 Length = 1454 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cattccattccattcgccaa 137 |||||||||||||||||||| Sbjct: 5466 cattccattccattcgccaa 5485
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cattccattccattcgccaa 137 |||||||||||||||||||| Sbjct: 92277 cattccattccattcgccaa 92296
>gb|AC022370.28| Homo sapiens chromosome UL clone RP11-22O10, complete sequence Length = 179013 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 169710 cttccattccattccattcg 169691 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 161237 cttccattccattccattcg 161218
>gb|AF298192.1|AF298192 Homo sapiens clone pE-2 microsatellite III sequence Length = 584 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 131 ttccattccattccattcgc 112
>gb|BC018718.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone MGC:31802 IMAGE:4123580), complete cds Length = 3963 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 32 ccctcggcggccgccgccgc 13
>gb|BC009351.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:4138717), partial cds Length = 3972 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 41 ccctcggcggccgccgccgc 22
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 1403704 cggcggccgccgccgcgtcg 1403685
>ref|NM_025256.4| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a-SPI, mRNA Length = 3892 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>ref|NM_006709.2| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a, mRNA Length = 3994 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 54 ccctcggcggccgccgccgc 35
>gb|AC084759.2|AC084759 Homo sapiens chromosome 15 clone RP11-643A5 map 15q21.3, complete sequence Length = 173921 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 60548 gcttccattccattccattc 60567
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 3029566 cggcggccgccgccgcgtcg 3029585
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 7199914 gcttccattccattccattc 7199895
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 29004760 gcttccattccattccattc 29004779 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 269 gcgcgccgcctccctcggcggccgccgccgcg 300 ||||| |||||||||| || |||||||||||| Sbjct: 2593580 gcgcgacgcctccctccgccgccgccgccgcg 2593549
>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete sequence Length = 178039 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 107722 cttccattccattccattcg 107741
>gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chromosome y, complete sequence Length = 230623 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 161931 cttccattccattccattcg 161912
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence Length = 184644 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 115885 ttccattccattccattcgc 115866
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cccgcgcgccgcctccctcg 285 |||||||||||||||||||| Sbjct: 158317 cccgcgcgccgcctccctcg 158336
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cccgcgcgccgcctccctcg 285 |||||||||||||||||||| Sbjct: 67777 cccgcgcgccgcctccctcg 67796
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence Length = 159722 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 68683 cttccattccattccattcg 68664 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 48135 cttccattccattccattcg 48116
>gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182916 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cattgtgtccccttccattc 393 |||||||||||||||||||| Sbjct: 129061 cattgtgtccccttccattc 129080
>gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, complete sequence Length = 174688 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 142248 gcttccattccattccattc 142229
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggcgaacaggtaaaagctg 435 |||||||||||||||||||| Sbjct: 709881 tggcgaacaggtaaaagctg 709900
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 26044 cgtcggcttctcctcgtcca 26063
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 ccgccgccgcgtcggcttctcctc 313 ||||||||||| |||||||||||| Sbjct: 121995 ccgccgccgcggcggcttctcctc 121972
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cgccgcctccctcggcggccgccgccgc 299 |||||||||| |||||||||||||||| Sbjct: 59458 cgccgcctccgccggcggccgccgccgc 59485
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 19716 gcggccgccgccgcgtcggc 19697
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 139748 gcggccgccgccgcgtcggc 139729
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 40398 gcttccattccattccattc 40379
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 94008 cgtcggcttctcctcgtcca 94027
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 146484 cgtcggcttctcctcgtcca 146465
>emb|BX649480.3| Human DNA sequence from clone RP11-22O10 on chromosome 10, complete sequence Length = 181432 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 169708 cttccattccattccattcg 169689 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttccattccattccattcg 133 |||||||||||||||||||| Sbjct: 161235 cttccattccattccattcg 161216
>emb|BX546479.5| Human DNA sequence from clone RP11-438N17 on chromosome 22, complete sequence Length = 172294 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 82543 ttccattccattccattcgc 82562 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 81898 ttccattccattccattcgc 81917 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 1860 ttccattccattccattcgc 1879
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cctcggcggccgccgccgcgtcgg 304 |||||||||||||||| ||||||| Sbjct: 7010 cctcggcggccgccgcggcgtcgg 6987
>dbj|AK121501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B16, full insert sequence Length = 1943 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 262 gcggccgccgccgcgtcggc 243
>dbj|AK120844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M14, full insert sequence Length = 2489 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 1654 cggcggccgccgccgcgtcg 1635
>dbj|AK120813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014M03, full insert sequence Length = 2643 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 1723 cggcggccgccgccgcgtcg 1704
>dbj|AK107491.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D02, full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgtcggcttctcctcgtcca 318 |||||||||||||||||||| Sbjct: 768 cgtcggcttctcctcgtcca 787
>dbj|AK105697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C12, full insert sequence Length = 1645 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcttccattccattccattc 132 |||||||||||||||||||| Sbjct: 48 gcttccattccattccattc 67
>dbj|AK073323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028O20, full insert sequence Length = 1803 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 141 gcggccgccgccgcgtcggc 122
>emb|AL671532.13| Human DNA sequence from clone RP11-512A4 on chromosome 22, complete sequence Length = 211173 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttccattccattccattcgc 134 |||||||||||||||||||| Sbjct: 190343 ttccattccattccattcgc 190324
>dbj|AK063586.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A06, full insert sequence Length = 1392 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cccgcgcgccgcctccctcg 285 |||||||||||||||||||| Sbjct: 866 cccgcgcgccgcctccctcg 847
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tggcgaacaggtaaaagctg 435 |||||||||||||||||||| Sbjct: 717088 tggcgaacaggtaaaagctg 717107
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tggcgaacaggtaaaagctg 435 |||||||||||||||||||| Sbjct: 2345089 tggcgaacaggtaaaagctg 2345070
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcggccgccgccgcgtcggc 305 |||||||||||||||||||| Sbjct: 994486 gcggccgccgccgcgtcggc 994467
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 attcatgttgatgtcatgga 478 |||||||||||||||||||| Sbjct: 2993655 attcatgttgatgtcatgga 2993636
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 3029511 cggcggccgccgccgcgtcg 3029530
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cggcggccgccgccgcgtcg 303 |||||||||||||||||||| Sbjct: 125277 cggcggccgccgccgcgtcg 125258
>dbj|AB077209.1| Mus musculus mRNA for G9a short, complete cds Length = 3757 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ccctcggcggccgccgccgc 299 |||||||||||||||||||| Sbjct: 44 ccctcggcggccgccgccgc 25
>gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome 5, complete sequence Length = 213322 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gtcgccctcctcctcgctctgctc 253 |||||||||||| ||||||||||| Sbjct: 77122 gtcgccctcctcgtcgctctgctc 77099 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,842,178 Number of Sequences: 3902068 Number of extensions: 3842178 Number of successful extensions: 148449 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116375 Number of HSP's gapped (non-prelim): 32058 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
