| Clone Name | baal21n20 |
|---|---|
| Clone Library Name | barley_pub |
>ATL2F_ARATH (O64762) Putative RING-H2 finger protein ATL2F| Length = 302 Score = 32.3 bits (72), Expect = 0.79 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%) Frame = +1 Query: 49 DLERFTLRLPEHVRREM-------VAAGEQSAHRRAQR---AGRWPSFLRYTRTL 183 +L+RFTLRLPE VRR++ VA + + RR R AG S Y R + Sbjct: 211 NLDRFTLRLPEEVRRQLTKKTVDNVAFSQARSSRRGYRSRSAGSERSVFSYQRRM 265
>ATL4C_ARATH (Q9M0R5) Putative RING-H2 finger protein ATL4C precursor| Length = 345 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/25 (52%), Positives = 21/25 (84%) Frame = +1 Query: 31 VVRLDRDLERFTLRLPEHVRREMVA 105 V +L +L+RFTL+LPE V+R++V+ Sbjct: 233 VQQLGENLDRFTLQLPEEVQRQLVS 257
>ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RING-H2 finger| protein ATL9) Length = 378 Score = 30.8 bits (68), Expect = 2.3 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 49 DLERFTLRLPEHVRREMVAAGEQSAH 126 +L+RFTLRLP+ VRR+++ H Sbjct: 268 NLDRFTLRLPDDVRRQLMKTSRTMGH 293
>ATL4B_ARATH (Q9M0R6) Putative RING-H2 finger protein ATL4B precursor| Length = 302 Score = 29.6 bits (65), Expect = 5.1 Identities = 11/25 (44%), Positives = 22/25 (88%) Frame = +1 Query: 31 VVRLDRDLERFTLRLPEHVRREMVA 105 +++L +L+RFTL+LPE ++R++V+ Sbjct: 195 LLQLGTNLDRFTLQLPEEMQRQLVS 219
>EME1_SCHPO (Q9C103) Crossover junction endonuclease eme1 (EC 3.1.22.-)| (Essential meiotic endonuclease 1) Length = 738 Score = 29.6 bits (65), Expect = 5.1 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -1 Query: 314 DTPPRSTKCTAATR-FPLILVDDEEDTSPPSELSVLLGVEKNLPDSVLVYL 165 DTP RST+C + + F LV ED P ++ + +K++ D++L+ L Sbjct: 47 DTPQRSTQCDSLLKSFSTPLVSGSEDVLPSPRDALNITNKKSVTDNLLLSL 97
>Y4DW_RHISN (P55422) Hypothetical 22.9 kDa protein y4dW| Length = 204 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -3 Query: 207 RRRKEPSRQRPGVPQERWPSAGSLCAAMRALLP 109 ++RK R RP +P+E+WP+ +A A +P Sbjct: 154 QKRKRGYRPRPSLPKEKWPAEAEHESATSAPVP 186
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -1 Query: 305 PRSTKCT-AATRFPLILVDDEEDTSPPSELSVLLGVEKNLPD-SVLVYLRNDGHLPALCA 132 P+S K A + +L + +DT+PP + +G E N+P+ SV ++ +N L + Sbjct: 166 PKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKLIS 225 Query: 131 RR 126 RR Sbjct: 226 RR 227
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Frame = +2 Query: 239 CPLHR------RRGLEGSAWPPCISSNAAACPVPK--SALWRSMWTRTRQLAGRF 379 CPL R R +G ++P I S+ +C K S WR + T R+ +GRF Sbjct: 1414 CPLPRAELEQHRADFKGGSFPLSIVSSYNSCSKKKGESGAWRKVNTSPRRKSGRF 1468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,039,871 Number of Sequences: 219361 Number of extensions: 1262784 Number of successful extensions: 4675 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4672 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)