ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21n19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMR1_ARATH (Q9ZVJ2) Protein At2g38710 86 3e-17
2AMER1_HUMAN (Q9Y4X0) AMME syndrome candidate gene 1 protein 59 3e-09
3AMER1_MOUSE (Q9JHT5) AMME syndrome candidate gene 1 protein homolog 59 3e-09
4Y5902_DROME (Q9VCF0) Protein CG5902 50 2e-06
5AMER1_CAEEL (Q22004) Hypothetical protein R166.3 in chromosome II 49 5e-06
6YKQ3_SCHPO (Q9P6M2) Hypothetical protein C688.03c in chrmosome I 48 6e-06
7Y464_KLULA (Q9URS8) Hypothetical protein KLLA0D02464g 45 5e-05
8YO289_YEAST (Q12012) Protein YOR289W 39 0.003

>AMR1_ARATH (Q9ZVJ2) Protein At2g38710|
          Length = 214

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           ELP L+CTVS+LT+YE A +YLDWEVGKHG+IIEFT+P+ N +RS TYLPE
Sbjct: 89  ELPSLQCTVSVLTDYEDAEDYLDWEVGKHGIIIEFTEPETNTKRSATYLPE 139



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>AMER1_HUMAN (Q9Y4X0) AMME syndrome candidate gene 1 protein|
          Length = 333

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           ELP L C+VS+LT +E   +YLDWEVG HG+ IEF + +   +R+ TYLPE
Sbjct: 209 ELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFIN-EKGSKRTATYLPE 258



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>AMER1_MOUSE (Q9JHT5) AMME syndrome candidate gene 1 protein homolog|
          Length = 344

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           ELP L C+VS+LT +E   +YLDWEVG HG+ IEF + +   +R+ TYLPE
Sbjct: 220 ELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFIN-EKGSKRTATYLPE 269



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>Y5902_DROME (Q9VCF0) Protein CG5902|
          Length = 243

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           ELP L  +VSIL  +E A  +LDW++G HG+ IEF   +   +R+ TYLP+
Sbjct: 128 ELPRLTVSVSILQNFEEAQGHLDWQLGVHGIRIEFL-TERGCKRTATYLPQ 177



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>AMER1_CAEEL (Q22004) Hypothetical protein R166.3 in chromosome II|
          Length = 200

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           E+P L+C VS+L  +E   N+ DW +G+HG+ + F D   N  RS  +LPE
Sbjct: 88  EVPSLQCGVSLLINFEPIHNFRDWTIGRHGVRMNFDDGHRN--RSAVFLPE 136



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>YKQ3_SCHPO (Q9P6M2) Hypothetical protein C688.03c in chrmosome I|
          Length = 204

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALNYLDWEVGKHGLIIEFTDPDYNVRRSGTYLP 152
           EL  LEC + +L ++E   + LDWEVG HG+ I+FT     +R S TYLP
Sbjct: 100 ELALLECQIDLLVDFEPIDDPLDWEVGIHGVSIKFT--ANGIRYSSTYLP 147



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>Y464_KLULA (Q9URS8) Hypothetical protein KLLA0D02464g|
          Length = 227

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETALN---------YLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           EL  L C  ++L++++T  +           +WE+GKHG+ I+F  P  N R S T+LPE
Sbjct: 102 ELSQLRCGCNLLSQFKTIYSSEGTGNSGDIWNWEIGKHGIEIKFRHPKTNSRMSATFLPE 161



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>YO289_YEAST (Q12012) Protein YOR289W|
          Length = 251

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
 Frame = +3

Query: 3   ELPYLECTVSILTEYETAL--------NYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPE 155
           EL  L+C+ +IL  ++T          +  DWE+GKHG+ + F  P      S T+LP+
Sbjct: 129 ELVDLKCSCNILGNFKTIFRGGGNPNGDIFDWELGKHGIELYFKHPKTGTTCSATFLPD 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,894,009
Number of Sequences: 219361
Number of extensions: 308820
Number of successful extensions: 576
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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