No.
Definition
Score (bits)
E Value
1 PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast...
204
7e-54
2 PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast p...
196
3e-51
3 POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast pr...
194
8e-51
4 POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast prec...
191
7e-50
5 PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast...
191
2e-49
6 PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast...
191
2e-49
7 PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast...
188
6e-49
8 PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast...
189
6e-49
9 POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (...
187
7e-49
10 PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast...
186
3e-48
11 POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast pr...
171
3e-43
12 POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast pr...
162
8e-40
13 POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase...
120
3e-27
14 POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase...
119
5e-27
15 RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco...
37
0.030
16 ALA8_ARATH (Q9LK90) Putative phospholipid-transporting ATPase 8 ...
35
0.11
17 RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco...
33
0.43
18 WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1....
31
2.8
19 RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)
31
2.8
20 DPO3B_HELPY (O25242) DNA polymerase III beta subunit (EC 2.7.7.7)
30
4.8
21 YLJ2_CAEEL (P34367) Hypothetical protein C50C3.2 in chromosome III
30
6.2
22 RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)
30
6.2
23 CAPZA_NEUCR (Q9P5K9) Probable F-actin capping protein alpha subunit
30
6.2
24 TRMU_LACAC (Q5FKU0) Probable tRNA (5-methylaminomethyl-2-thiouri...
29
8.1
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC|
1.3.1.33) (PCR B) (NADPH-protochlorophyllide
oxidoreductase B) (POR B)
Length = 395
Score = 204 bits (520), Expect(3) = 7e-54
Identities = 100/100 (100%), Positives = 100/100 (100%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG
Sbjct: 296 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 355
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA
Sbjct: 356 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
Score = 25.0 bits (53), Expect(3) = 7e-54
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 271 KDSKVCNMLTMQ 282
Score = 21.6 bits (44), Expect(3) = 7e-54
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 284 FHRRYHE 290
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC|
1.3.1.33) (PCR) (NADPH-protochlorophyllide
oxidoreductase) (POR)
Length = 398
Score = 194 bits (493), Expect(3) = 8e-51
Identities = 94/100 (94%), Positives = 97/100 (97%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVSEPSLTKSG
Sbjct: 299 FASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSG 358
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWNK+SASFENQLSEEASD EKARKVWE+SEKLVGLA
Sbjct: 359 VYWSWNKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398
Score = 25.0 bits (53), Expect(3) = 8e-51
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 274 KDSKVCNMLTMQ 285
Score = 21.6 bits (44), Expect(3) = 8e-51
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 287 FHRRYHE 293
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC|
1.3.1.33) (PCR) (NADPH-protochlorophyllide
oxidoreductase) (POR)
Length = 399
Score = 191 bits (485), Expect(3) = 7e-50
Identities = 92/100 (92%), Positives = 96/100 (96%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSEEE+GKRLAQVVS+PSLTKSG
Sbjct: 300 FASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSG 359
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWN SASFENQLS+EASD EKARKVWE+SEKLVGLA
Sbjct: 360 VYWSWNNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399
Score = 25.0 bits (53), Expect(3) = 7e-50
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 275 KDSKVCNMLTMQ 286
Score = 21.6 bits (44), Expect(3) = 7e-50
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 288 FHRRYHE 294
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC|
1.3.1.33) (PCR A) (NADPH-protochlorophyllide
oxidoreductase A) (POR A)
Length = 388
Score = 188 bits (477), Expect(3) = 6e-49
Identities = 89/100 (89%), Positives = 97/100 (97%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV+EPSLTKSG
Sbjct: 289 FSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSG 348
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA
Sbjct: 349 VYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
Score = 25.0 bits (53), Expect(3) = 6e-49
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 264 KDSKVCNMLTMQ 275
Score = 21.6 bits (44), Expect(3) = 6e-49
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 277 FHRRYHE 283
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)|
(NADPH-protochlorophyllide oxidoreductase) (POR)
(Fragment)
Length = 313
Score = 187 bits (476), Expect(3) = 7e-49
Identities = 89/100 (89%), Positives = 96/100 (96%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV EPSLTKSG
Sbjct: 214 FSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVGEPSLTKSG 273
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA
Sbjct: 274 VYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 313
Score = 25.0 bits (53), Expect(3) = 7e-49
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 189 KDSKVCNMLTMQ 200
Score = 21.6 bits (44), Expect(3) = 7e-49
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 202 FHRRYHE 208
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC|
1.3.1.33) (PCR A) (NADPH-protochlorophyllide
oxidoreductase A) (POR A)
Length = 388
Score = 186 bits (471), Expect(3) = 3e-48
Identities = 88/100 (88%), Positives = 96/100 (96%)
Frame = +3
Query: 96 FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSG 275
F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV+EP LTKSG
Sbjct: 289 FSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPVLTKSG 348
Query: 276 VYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395
VYWSWNK+SASFENQLS+EASD EKARKVWELSEKLVGLA
Sbjct: 349 VYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388
Score = 25.0 bits (53), Expect(3) = 3e-48
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 19 RXSKVCNMLTMQ 54
+ SKVCNMLTMQ
Sbjct: 264 KDSKVCNMLTMQ 275
Score = 21.6 bits (44), Expect(3) = 3e-48
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 59 FHRRYHE 79
FHRRYHE
Sbjct: 277 FHRRYHE 283
>TRMU_LACAC (Q5FKU0) Probable tRNA|
(5-methylaminomethyl-2-thiouridylate)-methyltransferase
(EC 2.1.1.61)
Length = 375
Score = 29.3 bits (64), Expect = 8.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 442 RSGFETSPESRPVGDHASPTSFSLSSQTFLAFSVSLASSESWF 314
+SG +PE + VG+HA +++ + L + S++ WF
Sbjct: 218 KSGKMVTPEGKVVGEHAGLMYYTIGQRQGLGLGSTKESTDPWF 260
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,024,260
Number of Sequences: 219361
Number of extensions: 1119678
Number of successful extensions: 4002
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3995
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)