ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal22b01 |
|---|---|
| Clone Library Name | barley_pub |
>DRD2_CANFA (Q9GJU1) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 33.9 bits (76), Expect = 0.18 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 109 PQEINGSYLPPPLHGVA----SHHVLHHTADSPRCAMVVEHKKKQQHPFVEVLLRLHRQP 276 P+ S +PP H + SHH LH TADSP A ++ + HP + + + P Sbjct: 290 PERTRYSPIPPSHHQLTLPDPSHHGLHSTADSP--AKPEKNGHAKDHPKIAKIFEIQSMP 347 Query: 277 VGR 285 G+ Sbjct: 348 NGK 350
>DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = +1 Query: 109 PQEINGSYLPPPLHGVA----SHHVLHHTADSPRCAMVVEHKKKQQHPFVEVLLRLHRQP 276 P+ S +PP H + SHH LH T DSP A ++ + HP + + + P Sbjct: 290 PERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSP--AKPEKNGHAKDHPKIAKIFEIQTMP 347 Query: 277 VGR 285 G+ Sbjct: 348 NGK 350
>DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = +1 Query: 109 PQEINGSYLPPPLHGVA----SHHVLHHTADSPRCAMVVEHKKKQQHPFVEVLLRLHRQP 276 P+ S +PP H + SHH LH T DSP A ++ + HP + + + P Sbjct: 290 PERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSP--AKPEKNGHAKDHPKIAKIFEIQTMP 347 Query: 277 VGR 285 G+ Sbjct: 348 NGK 350
>DRD2_CERAE (P52702) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 32.0 bits (71), Expect = 0.70 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = +1 Query: 109 PQEINGSYLPPPLHGVA----SHHVLHHTADSPRCAMVVEHKKKQQHPFVEVLLRLHRQP 276 P+ S +PP H + SHH LH T DSP A ++ + HP + + + P Sbjct: 290 PERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSP--AKPEKNGHAKNHPKIAKIFEIQTMP 347 Query: 277 VGR 285 G+ Sbjct: 348 NGK 350
>PQQE_XANCP (Q8P6M7) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 376 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -1 Query: 420 EREIKNGRGARTDAISMAPGRATR*PMCFQSPSPAGSR 307 +REI G G R A+++A AT P+C +SP+ AG R Sbjct: 305 KREIDWG-GCRCQALALAGDAATLDPVCERSPAHAGIR 341
>PQQE_XANC8 (Q4UXI4) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 376 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -1 Query: 420 EREIKNGRGARTDAISMAPGRATR*PMCFQSPSPAGSR 307 +REI G G R A+++A AT P+C +SP+ AG R Sbjct: 305 KREIDWG-GCRCQALALAGDAATLDPVCERSPAHAGIR 341
>KPRS_THETN (Q8R753) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 316 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Frame = -1 Query: 207 HGAARGICCVVEHVMRGDAVERR-----RKVAAVDLLGLENDSKTEELAAAATASICDGQ 43 HGA C V+ G A+ER ++V D + L + K +++ + A + Sbjct: 242 HGAVEIYACATHGVLSGPAIERLKESPIKEVVITDTIPLPEEKKIDKIKVRSVAPLFAEA 301 Query: 42 KLRVDKIXCVAQL 4 LR+ + V++L Sbjct: 302 ILRIHEGMSVSKL 314
>SC11A_MOUSE (Q9R053) Sodium channel protein type 11 alpha subunit (Sodium channel| protein type XI alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.9) (Sensory neuron sodium channel 2) (NaN) Length = 1765 Score = 28.9 bits (63), Expect = 5.9 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -2 Query: 242 KGCCCFFLCSTTMAQRGESAVWWS 171 KG C FLC T+ ++ +WW+ Sbjct: 1000 KGLSCIFLCCKTIKKKSPWVLWWN 1023
>CN12L_DROME (Q9VTL1) CSN12-like protein| Length = 395 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query: 100 VFQPQEINGSYLPPPLHGVASHH--VLHHTADSP 195 + QP+++ +L PPL V S H VL+H A P Sbjct: 42 IAQPEKLVDRFLKPPLDEVVSAHLKVLYHLAQEP 75
>DRD2_BOVIN (P20288) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 444 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = +1 Query: 109 PQEINGSYLPPPLHGVA----SHHVLHHTADSPRCAMVVEHKKKQQHPFVEVLLRLHRQP 276 P+ S +PP H + SHH LH T DSP H K +P + + + P Sbjct: 290 PERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSPAKPEKNGH-AKTVNPKIAKIFEIQSMP 348 Query: 277 VGR 285 G+ Sbjct: 349 NGK 351
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 24.3 bits (51), Expect(2) = 8.9 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = +3 Query: 315 PQETATGNTSATASPGPAPSRSHPYA 392 PQ+ S P P P S+PYA Sbjct: 1044 PQQRVATPLSGGVPPAPLPKASNPYA 1069 Score = 22.3 bits (46), Expect(2) = 8.9 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 136 PPPLHGVASHHVLHHTADSPRCAM 207 PPPLH + L T++SPR ++ Sbjct: 981 PPPLHKNSRVPSLVATSESPRASI 1004
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 25.4 bits (54), Expect(2) = 9.5 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 106 QPQEINGSYLPPPLHGVASHHVLHHTADSPRCAMVVEHKKKQQ 234 QPQ+ + P P SH V HH SP A + + +++QQ Sbjct: 437 QPQQRQRQHPPVP-----SHQVAHH---SPAAAPIQQQQQQQQ 471 Score = 21.2 bits (43), Expect(2) = 9.5 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +3 Query: 345 ATASPGPAPSRSHP 386 A +SP PAP S+P Sbjct: 496 ANSSPAPAPLPSYP 509 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,222,383 Number of Sequences: 219361 Number of extensions: 1019040 Number of successful extensions: 3530 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3385 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3526 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
