ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
2dbj|AK060098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
3dbj|AK059861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
4dbj|AK059747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
5dbj|AK059321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
6dbj|AK104250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
7dbj|AK104179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
8dbj|AK104015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
9dbj|AK059969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
10gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
15emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.025
16ref|NM_189840.2| Oryza sativa (japonica cultivar-group), mRNA 46 0.097
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.097
18dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.097
19dbj|AK062716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.097
20gb|BC035798.1| Homo sapiens similar to expressed sequence AI5934... 44 0.38
21emb|AL354898.10| Human DNA sequence from clone RP11-618A20 on ch... 44 0.38
22gb|BC068577.1| Homo sapiens similar to expressed sequence AI5934... 44 0.38
23emb|BX932778.2| Gallus gallus finished cDNA, clone ChEST479i21 44 0.38
24dbj|AB055278.1| Macaca fascicularis brain cDNA, clone:QflA-11381... 44 0.38
25ref|NM_207645.1| Homo sapiens similar to expressed sequence AI59... 44 0.38
26dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.38
27gb|AC150313.7| Mus musculus BAC clone RP23-436A18 from chromosom... 42 1.5
28emb|AJ130845.1|CCO130845 Coturnix coturnix mRNA for pim-3 protein 42 1.5
29dbj|AK120395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
30dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32gb|AC151414.2| Mus musculus BAC clone RP23-44E14 from 7, complet... 42 1.5
33gb|BC085387.1| Danio rerio zgc:101614, mRNA (cDNA clone MGC:1016... 40 6.0
34gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.0
35gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.0
36ref|XM_360206.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.0
37ref|XM_415827.1| PREDICTED: Gallus gallus similar to myosin 18A ... 40 6.0
38ref|XM_453439.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D08459g ... 40 6.0
39gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome... 40 6.0
40gb|AC125161.3| Mus musculus BAC clone RP24-410I2 from chromosome... 40 6.0
41ref|XM_801319.1| Trypanosoma cruzi strain CL Brener trans-sialid... 40 6.0
42gb|AC163496.4| Mus musculus chromosome 1, clone RP24-325M15, com... 40 6.0
43emb|AL807246.11| Human DNA sequence from clone RP11-461H3 on chr... 40 6.0
44emb|AL445232.5| Human DNA sequence from clone RP11-71J12 on chro... 40 6.0
45ref|XM_787670.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
46ref|XM_778002.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
47emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.0
48emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.0
49emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.0
50emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.0
51emb|AJ630366.1| Canis familiaris MHC class II region on chromoso... 40 6.0
52gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.0
53gb|AF312856.1| Pestivirus isolate Hay 87/2210 non-structural pro... 40 6.0
54ref|NM_005715.1| Homo sapiens uronyl-2-sulfotransferase (UST), mRNA 40 6.0
55gb|BC093694.1| Homo sapiens uronyl-2-sulfotransferase, mRNA (cDN... 40 6.0
56gb|BC093668.1| Homo sapiens uronyl-2-sulfotransferase, mRNA (cDN... 40 6.0
57gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
58ref|NM_001007452.1| Danio rerio zgc:101614 (zgc:101614), mRNA 40 6.0
59dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.0
60gb|AC012039.10|AC012039 Homo sapiens 3 BAC RP11-154F9 (Roswell P... 40 6.0
61dbj|AB020316.1| Homo sapiens mRNA for dermatan/chondroitin sulfa... 40 6.0 
>dbj|AK104144.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A12, full
           insert sequence
          Length = 997

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||||||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 380 gatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 439

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 440 gacccggcggcttccagatagcatccg 466
to top
>dbj|AK060098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G12, full
           insert sequence
          Length = 1024

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||||||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 338 gatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 397

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 398 gacccggcggcttccagatagcatccg 424
to top
>dbj|AK059861.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C05, full
           insert sequence
          Length = 937

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||||||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 434 gatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 493

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 494 gacccggcggcttccagatagcatccg 520
to top
>dbj|AK059747.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A02, full
           insert sequence
          Length = 923

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||||||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 279 gatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 338

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 339 gacccggcggcttccagatagcatccg 365
to top
>dbj|AK059321.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H08, full
           insert sequence
          Length = 974

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||||||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 291 gatgggttcttgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcgc 350

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 351 gacccggcggcttccagatagcatccg 377
to top
>dbj|AK104250.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H05, full
           insert sequence
          Length = 979

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||| ||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 306 gatgggttctcgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 365

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 366 gacccggcggcttccagatagcatccg 392
to top
>dbj|AK104179.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G06, full
           insert sequence
          Length = 974

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||| ||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 357 gatgggttctcgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 416

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 417 gacccggcggcttccagatagcatccg 443
to top
>dbj|AK104015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F09, full
           insert sequence
          Length = 969

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||| ||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 306 gatgggttctcgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 365

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 366 gacccggcggcttccagatagcatccg 392
to top
>dbj|AK059969.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-G08, full
           insert sequence
          Length = 1048

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 300 gatggattcttgagcccgcaggagacggcgactggaaacacatcggctaccgcgtcgccc 359
           ||||| |||| ||||| |||||||||||||| |||   || ||||| ||||||||||| |
Sbjct: 363 gatgggttctcgagcctgcaggagacggcgattggcgtcatatcgggtaccgcgtcgcac 422

                                      
Query: 360 ggcccggcgccatcgagatcgcatccg 386
           | ||||||| | || |||| |||||||
Sbjct: 423 gacccggcggcttccagatagcatccg 449
to top
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15,
              complete sequence
          Length = 147941

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                          
Query: 317    gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
              |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 108696 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 108637

                          
Query: 377    atcgcatccgta 388
              || |||||||||
Sbjct: 108636 atagcatccgta 108625
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                           
Query: 317     gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
               |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 1156315 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 1156374

                           
Query: 377     atcgcatccgta 388
               || |||||||||
Sbjct: 1156375 atagcatccgta 1156386
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                           
Query: 317     gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
               |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 1281919 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 1281978

                           
Query: 377     atcgcatccgta 388
               || |||||||||
Sbjct: 1281979 atagcatccgta 1281990
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                           
Query: 317     gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
               |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 1279640 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 1279699

                           
Query: 377     atcgcatccgta 388
               || |||||||||
Sbjct: 1279700 atagcatccgta 1279711
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                           
Query: 317     gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
               |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 1156315 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 1156374

                           
Query: 377     atcgcatccgta 388
               || |||||||||
Sbjct: 1156375 atagcatccgta 1156386
to top
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 317   gcaggagacggcgactggaaacacatcggctaccgcgtcgcccggcccggcgccatcgag 376
             |||||||||||||| |||   || ||||| ||||||||||| || ||||||| | || ||
Sbjct: 95298 gcaggagacggcgattggcgtcatatcgggtaccgcgtcgcacgacccggcggcttccag 95357

                         
Query: 377   atcgcatccgta 388
             || |||||||||
Sbjct: 95358 atagcatccgta 95369
to top
>ref|NM_189840.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 731

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 214 gagcacaagaagaagcagcagca 236
           |||||||||||||||||||||||
Sbjct: 96  gagcacaagaagaagcagcagca 118
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 214      gagcacaagaagaagcagcagca 236
                |||||||||||||||||||||||
Sbjct: 25531543 gagcacaagaagaagcagcagca 25531565



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 350     cgcgtcgcccggcccggcgcc 370
               |||||||||||||||||||||
Sbjct: 7533441 cgcgtcgcccggcccggcgcc 7533461
to top
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0560B08
          Length = 128098

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 214   gagcacaagaagaagcagcagca 236
             |||||||||||||||||||||||
Sbjct: 68813 gagcacaagaagaagcagcagca 68835
to top
>dbj|AK062716.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C08, full
           insert sequence
          Length = 731

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 214 gagcacaagaagaagcagcagca 236
           |||||||||||||||||||||||
Sbjct: 96  gagcacaagaagaagcagcagca 118
to top
>gb|BC035798.1| Homo sapiens similar to expressed sequence AI593442, mRNA (cDNA
           clone IMAGE:5735100), partial cds
          Length = 2430

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgctcctccgcctccaccggcagcc 275
           |||||||||||||||||||| |||||
Sbjct: 808 gtgctcctccgcctccaccgccagcc 833
to top
>emb|AL354898.10| Human DNA sequence from clone RP11-618A20 on chromosome 9 Contains a
             novel gene (DKFZp434P0216), the ASS gene for
             argininosuccinate synthetase (ASS1,CTLN1) and three CpG
             islands, complete sequence
          Length = 173023

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   agcacaagaagaagcagcagca 236
             ||||||||||||||||||||||
Sbjct: 26705 agcacaagaagaagcagcagca 26684
to top
>gb|BC068577.1| Homo sapiens similar to expressed sequence AI593442, mRNA (cDNA
           clone MGC:87557 IMAGE:4818568), complete cds
          Length = 2355

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgctcctccgcctccaccggcagcc 275
           |||||||||||||||||||| |||||
Sbjct: 861 gtgctcctccgcctccaccgccagcc 886
to top
>emb|BX932778.2| Gallus gallus finished cDNA, clone ChEST479i21
          Length = 818

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 249 ggtgctcctccgcctccaccggcagc 274
           |||||||||||||||||||| |||||
Sbjct: 463 ggtgctcctccgcctccaccagcagc 438
to top
>dbj|AB055278.1| Macaca fascicularis brain cDNA, clone:QflA-11381, similar to human
           hypothetical protein LOC399947, mRNA, NM_207645
          Length = 2015

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgctcctccgcctccaccggcagcc 275
           |||||||||||||||||||| |||||
Sbjct: 825 gtgctcctccgcctccaccgccagcc 850
to top
>ref|NM_207645.1| Homo sapiens similar to expressed sequence AI593442 (LOC399947),
           mRNA
          Length = 2355

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 250 gtgctcctccgcctccaccggcagcc 275
           |||||||||||||||||||| |||||
Sbjct: 861 gtgctcctccgcctccaccgccagcc 886
to top
>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete
              sequence
          Length = 189955

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 250    gtgctcctccgcctccaccggcagcc 275
              |||||||||||||||||||| |||||
Sbjct: 137235 gtgctcctccgcctccaccgccagcc 137260
to top
>gb|AC150313.7| Mus musculus BAC clone RP23-436A18 from chromosome 7, complete sequence
          Length = 204095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     ggaggcagtggcagcagcggc 78
              |||||||||||||||||||||
Sbjct: 184838 ggaggcagtggcagcagcggc 184858
to top
>emb|AJ130845.1|CCO130845 Coturnix coturnix mRNA for pim-3 protein
          Length = 1534

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 accggcagcccgtcggccgtc 286
           |||||||||||||||||||||
Sbjct: 299 accggcagcccgtcggccgtc 279
to top
>dbj|AK120395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075G01, full
            insert sequence
          Length = 3213

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 350  cgcgtcgcccggcccggcgcc 370
            |||||||||||||||||||||
Sbjct: 2617 cgcgtcgcccggcccggcgcc 2597
to top
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0061L20
          Length = 138926

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 350    cgcgtcgcccggcccggcgcc 370
              |||||||||||||||||||||
Sbjct: 111755 cgcgtcgcccggcccggcgcc 111775
to top
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0407H12
          Length = 167754

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   cgcgtcgcccggcccggcgcc 370
             |||||||||||||||||||||
Sbjct: 38851 cgcgtcgcccggcccggcgcc 38871
to top
>gb|AC151414.2| Mus musculus BAC clone RP23-44E14 from 7, complete sequence
          Length = 190050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     ggaggcagtggcagcagcggc 78
              |||||||||||||||||||||
Sbjct: 110977 ggaggcagtggcagcagcggc 110957
to top
>gb|BC085387.1| Danio rerio zgc:101614, mRNA (cDNA clone MGC:101614 IMAGE:7224720),
           complete cds
          Length = 2245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tctgtcttgctgtcgttttc 105
           ||||||||||||||||||||
Sbjct: 632 tctgtcttgctgtcgttttc 651
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    gtgctcctccgcctccaccg 269
              ||||||||||||||||||||
Sbjct: 930995 gtgctcctccgcctccaccg 931014
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     ccgcgtcgcccggcccggcg 368
               ||||||||||||||||||||
Sbjct: 2596318 ccgcgtcgcccggcccggcg 2596299
to top
>ref|XM_360206.1| Magnaporthe grisea 70-15 hypothetical protein (MG05580.4) partial
            mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  ccggcccggcgccatcgaga 377
            ||||||||||||||||||||
Sbjct: 1182 ccggcccggcgccatcgaga 1201
to top
>ref|XM_415827.1| PREDICTED: Gallus gallus similar to myosin 18A isoform a; myosin 18A;
            myosin containing PDZ domain (LOC417581), mRNA
          Length = 7860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  gcacaagaagaagcagcagc 235
            ||||||||||||||||||||
Sbjct: 2709 gcacaagaagaagcagcagc 2728
to top
>ref|XM_453439.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D08459g predicted mRNA
          Length = 2253

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 acaagaagaagcagcagcat 237
           ||||||||||||||||||||
Sbjct: 825 acaagaagaagcagcagcat 806
to top
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence
          Length = 186986

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tccagccccaggagatcaac 123
              ||||||||||||||||||||
Sbjct: 106521 tccagccccaggagatcaac 106502
to top
>gb|AC125161.3| Mus musculus BAC clone RP24-410I2 from chromosome 1, complete sequence
          Length = 142794

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    acaagaagaagcagcagcat 237
              ||||||||||||||||||||
Sbjct: 137811 acaagaagaagcagcagcat 137792
to top
>ref|XM_801319.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053511197.10) partial mRNA
          Length = 1862

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 217  cacaagaagaagcagcagcatcct 240
            ||||||||| ||||||||||||||
Sbjct: 1832 cacaagaagcagcagcagcatcct 1809
to top
>gb|AC163496.4| Mus musculus chromosome 1, clone RP24-325M15, complete sequence
          Length = 165387

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   acaagaagaagcagcagcat 237
             ||||||||||||||||||||
Sbjct: 99162 acaagaagaagcagcagcat 99143
to top
>emb|AL807246.11| Human DNA sequence from clone RP11-461H3 on chromosome 6 Contains the 5'
              end of the UST gene for uronyl-2-sulfotransferase, a
              laminin receptor 1 (ribosomal protein SA, 67 kDa) (LAMR1)
              pseudogene and a CpG island, complete sequence
          Length = 124214

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aagaagaagcagcagcatcc 239
              ||||||||||||||||||||
Sbjct: 121493 aagaagaagcagcagcatcc 121512
to top
>emb|AL445232.5| Human DNA sequence from clone RP11-71J12 on chromosome 13 Contains the
             3' end of a novel gene (contains FLJ31860 and KIAA0853),
             possible ortholog of mouse 3110050K21Rik protein, complete
             sequence
          Length = 148103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 213   tgagcacaagaagaagcagcagca 236
             |||||||| |||||||||||||||
Sbjct: 82792 tgagcacatgaagaagcagcagca 82769
to top
>ref|XM_787670.1| PREDICTED: Strongylocentrotus purpuratus similar to PAR-6 gamma
           protein (LOC587966), mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 caagaagaagcagcagcatc 238
           ||||||||||||||||||||
Sbjct: 726 caagaagaagcagcagcatc 745
to top
>ref|XM_778002.1| PREDICTED: Strongylocentrotus purpuratus similar to par-6
           (partitioning defective 6) homolog beta (LOC577793),
           mRNA
          Length = 1142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 caagaagaagcagcagcatc 238
           ||||||||||||||||||||
Sbjct: 549 caagaagaagcagcagcatc 568
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     ctcctccgcctccaccggca 272
               ||||||||||||||||||||
Sbjct: 3771190 ctcctccgcctccaccggca 3771209
to top
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    acaagaagaagcagcagcat 237
              ||||||||||||||||||||
Sbjct: 719474 acaagaagaagcagcagcat 719493
to top
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    ccgcgtcgcccggcccggcg 368
              ||||||||||||||||||||
Sbjct: 175634 ccgcgtcgcccggcccggcg 175615
to top
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             9/14
          Length = 306550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   ccgcgtcgcccggcccggcg 368
             ||||||||||||||||||||
Sbjct: 67068 ccgcgtcgcccggcccggcg 67049
to top
>emb|AJ630366.1| Canis familiaris MHC class II region on chromosome CFA12, partial
             sequence, BAC clone 21p19, containing partial col11a2
             gene, RXRB, SLC39A7, HSD17B8, RING1, VPS52, RPS18 and
             B3GALT4 genes, C12H6orf11 ORF, KE2, RAB2L, TAPBP, ZNF297
             and DAXX genes
          Length = 143626

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   gctcctcgtccattcttgatctcc 415
             ||||||| ||||||||||||||||
Sbjct: 18971 gctcctcttccattcttgatctcc 18948
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     acatcggctaccgcgtcgcc 358
               ||||||||||||||||||||
Sbjct: 1172783 acatcggctaccgcgtcgcc 1172802
to top
>gb|AF312856.1| Pestivirus isolate Hay 87/2210 non-structural protein 3 helicase
            gene, partial cds
          Length = 1484

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  agccccaggagatcaacggc 126
            ||||||||||||||||||||
Sbjct: 1377 agccccaggagatcaacggc 1358
to top
>ref|NM_005715.1| Homo sapiens uronyl-2-sulfotransferase (UST), mRNA
          Length = 4196

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 aagaagaagcagcagcatcc 239
           ||||||||||||||||||||
Sbjct: 107 aagaagaagcagcagcatcc 126
to top
>gb|BC093694.1| Homo sapiens uronyl-2-sulfotransferase, mRNA (cDNA clone MGC:120729
           IMAGE:7939539), complete cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 aagaagaagcagcagcatcc 239
           ||||||||||||||||||||
Sbjct: 52  aagaagaagcagcagcatcc 71
to top
>gb|BC093668.1| Homo sapiens uronyl-2-sulfotransferase, mRNA (cDNA clone MGC:120703
           IMAGE:7939513), complete cds
          Length = 1289

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 aagaagaagcagcagcatcc 239
           ||||||||||||||||||||
Sbjct: 52  aagaagaagcagcagcatcc 71
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     ccgcgtcgcccggcccggcg 368
               ||||||||||||||||||||
Sbjct: 1074932 ccgcgtcgcccggcccggcg 1074951
to top
>ref|NM_001007452.1| Danio rerio zgc:101614 (zgc:101614), mRNA
          Length = 2245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tctgtcttgctgtcgttttc 105
           ||||||||||||||||||||
Sbjct: 632 tctgtcttgctgtcgttttc 651
to top
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     ctcctccgcctccaccggca 272
               ||||||||||||||||||||
Sbjct: 3864484 ctcctccgcctccaccggca 3864503
to top
>gb|AC012039.10|AC012039 Homo sapiens 3 BAC RP11-154F9 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 156673

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 tgagcacaagaagaagcagcagca 236
           |||||||| |||||||||||||||
Sbjct: 349 tgagcacatgaagaagcagcagca 372
to top
>dbj|AB020316.1| Homo sapiens mRNA for dermatan/chondroitin sulfate
           2-sulfotransferase, complete cds
          Length = 4196

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 aagaagaagcagcagcatcc 239
           ||||||||||||||||||||
Sbjct: 107 aagaagaagcagcagcatcc 126


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,630,505
Number of Sequences: 3902068
Number of extensions: 3630505
Number of successful extensions: 82464
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81763
Number of HSP's gapped (non-prelim): 700
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top