ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal22a23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 769 bits (388), Expect = 0.0 Identities = 395/396 (99%), Gaps = 1/396 (0%) Strand = Plus / Plus Query: 1 tacgtcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacat 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 451 tacgtcagccagggcctgcgg-aagtacgacttcgacaacaccatgggaggcttctacat 509 Query: 61 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 569 Query: 121 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 629 Query: 181 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 689 Query: 241 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 749 Query: 301 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 809 Query: 361 tgcgggtaggatgggcggaaccacgcagtacaccgt 396 |||||||||||||||||||||||||||||||||||| Sbjct: 810 tgcgggtaggatgggcggaaccacgcagtacaccgt 845
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 769 bits (388), Expect = 0.0 Identities = 395/396 (99%), Gaps = 1/396 (0%) Strand = Plus / Plus Query: 1 tacgtcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacat 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 196 tacgtcagccagggcctgcgg-aagtacgacttcgacaacaccatgggaggcttctacat 254 Query: 61 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 314 Query: 121 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 374 Query: 181 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 434 Query: 241 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 494 Query: 301 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 554 Query: 361 tgcgggtaggatgggcggaaccacgcagtacaccgt 396 |||||||||||||||||||||||||||||||||||| Sbjct: 555 tgcgggtaggatgggcggaaccacgcagtacaccgt 590
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 670 bits (338), Expect = 0.0 Identities = 365/374 (97%) Strand = Plus / Plus Query: 23 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 451 Query: 83 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 142 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 452 cttgttgtccatctctccaagaacttcatgaccctgcccaacatcaagatcccactcatc 511 Query: 143 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 202 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 512 ttgggtatctggggaggcaagggtcaaggaaaatccttccagtgtgagcttgtcttcgcc 571 Query: 203 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 262 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 572 aagatgggcatcaacccaatcatgatgagtgccggagagctggagagtggcaacgccgga 631 Query: 263 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 691 Query: 323 aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 382 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 692 aagatgtgctgcctcttcatcaacgatcttgacgccggtgcgggtaggatgggcgggacc 751 Query: 383 acgcagtacaccgt 396 || ||||||||||| Sbjct: 752 acacagtacaccgt 765
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 557 bits (281), Expect = e-156 Identities = 368/396 (92%), Gaps = 1/396 (0%) Strand = Plus / Plus Query: 1 tacgtcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacat 60 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 382 tacgtcagccagggcct-caagaagtacgacttcgacaacaccatgggaggcttctacat 440 Query: 61 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 120 ||| || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 441 cgccccggctttcatggacaagctcgttgtccacctctccaagaacttcatgaccctgcc 500 Query: 121 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 180 ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 501 caacatcaagatcccactcatcttgggtatctggggaggaaagggtcaggggaaatcctt 560 Query: 181 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 240 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 561 ccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgagtgccggaga 620 Query: 241 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 300 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 621 gctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgaggc 680 Query: 301 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 360 |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || Sbjct: 681 cgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgccgg 740 Query: 361 tgcgggtaggatgggcggaaccacgcagtacaccgt 396 |||||| |||||||||| ||||| ||||||||||| Sbjct: 741 cgcgggtcggatgggcgggaccacccagtacaccgt 776
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 557 bits (281), Expect = e-156 Identities = 368/396 (92%), Gaps = 1/396 (0%) Strand = Plus / Plus Query: 1 tacgtcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacat 60 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 392 tacgtcagccagggcct-caagaagtacgacttcgacaacaccatgggaggcttctacat 450 Query: 61 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 120 ||| || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 451 cgccccggctttcatggacaagctcgttgtccacctctccaagaacttcatgaccctgcc 510 Query: 121 caacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcatt 180 ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 511 caacatcaagatcccactcatcttgggtatctggggaggaaagggtcaggggaaatcctt 570 Query: 181 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 240 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 571 ccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgagtgccggaga 630 Query: 241 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 300 ||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 631 gctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgaggc 690 Query: 301 tgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctgg 360 |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || Sbjct: 691 cgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgccgg 750 Query: 361 tgcgggtaggatgggcggaaccacgcagtacaccgt 396 |||||| |||||||||| ||||| ||||||||||| Sbjct: 751 cgcgggtcggatgggcgggaccacccagtacaccgt 786
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 362 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 421 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 422 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 481 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 482 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 541 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 542 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 601 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 602 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 661 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 662 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 721 Query: 385 gcagtacac 393 |||||||| Sbjct: 722 ccagtacac 730
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 361 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 420 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 421 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 480 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 481 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 540 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 541 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 600 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 601 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 660 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 661 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 720 Query: 385 gcagtacac 393 |||||||| Sbjct: 721 ccagtacac 729
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 399 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 458 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 459 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 518 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 519 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 578 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 579 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 638 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 639 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 698 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 699 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 758 Query: 385 gcagtacac 393 |||||||| Sbjct: 759 ccagtacac 767
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 398 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 457 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 458 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 517 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 518 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 577 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 578 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 637 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 638 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 697 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 698 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 757 Query: 385 gcagtacac 393 |||||||| Sbjct: 758 ccagtacac 766
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 182 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 241 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 242 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 301 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 302 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 361 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 362 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 421 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 422 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 481 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 482 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 541 Query: 385 gcagtacac 393 |||||||| Sbjct: 542 ccagtacac 550
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 403 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 462 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 463 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 522 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 523 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 582 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 583 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 642 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 643 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 702 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 703 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 762 Query: 385 gcagtacac 393 |||||||| Sbjct: 763 ccagtacac 771
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 478 bits (241), Expect = e-132 Identities = 337/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 397 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 456 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 457 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 516 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 517 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 576 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 577 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 636 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 637 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 696 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 697 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 756 Query: 385 gcagtacac 393 |||||||| Sbjct: 757 ccagtacac 765
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 470 bits (237), Expect = e-129 Identities = 336/369 (91%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 410 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 469 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||| | | Sbjct: 470 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcaccct 529 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 530 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 589 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 590 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaacgccggaga 649 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| || ||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 650 gccggcgaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 709 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 710 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 769 Query: 385 gcagtacac 393 |||||||| Sbjct: 770 ccagtacac 778
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 458 bits (231), Expect = e-126 Identities = 335/369 (90%), Gaps = 3/369 (0%) Strand = Plus / Plus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 370 gtacgacttcgacaacaccatgggaggcttctacatcgccccttctttcatggacaagct 429 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 430 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 489 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 490 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 549 Query: 205 gatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggaga 264 |||||| |||||||||||||||||||| ||||||||||||||||| || ||| ||||| Sbjct: 550 gatggggatcaaccccatcatgatgagcgccggagagctggagagcggcaac---ggaga 606 Query: 265 gccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaa 324 ||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 607 gccggccaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaa 666 Query: 325 gatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccac 384 ||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || ||||| Sbjct: 667 gatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccac 726 Query: 385 gcagtacac 393 |||||||| Sbjct: 727 ccagtacac 735
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 377 bits (190), Expect = e-101 Identities = 340/389 (87%), Gaps = 1/389 (0%) Strand = Plus / Plus Query: 5 tcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacatcgct 64 |||||||||||||||| ||||||||||||||||||||||||| || | |||||||| Sbjct: 351 tcagccagggcctgcg-caagtacgacttcgacaacaccatggacgggctgtacatcgcc 409 Query: 65 cctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaac 124 || || |||||||||||||| | ||||| ||| |||| ||||||||||| || |||||| Sbjct: 410 ccggcgttcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaac 469 Query: 125 atcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccag 184 |||||| |||| |||||| |||||||||||||||||||||| || || || || |||||| Sbjct: 470 atcaaggtccctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccag 529 Query: 185 tgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctg 244 || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 530 tgcgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggagagctg 589 Query: 245 gagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgca 304 ||||| || ||||| || ||||| |||||||| ||| ||||| ||||||| |||||||| Sbjct: 590 gagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgaggctgcc 649 Query: 305 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 364 ||||| ||||||||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 650 gacattatcaagaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcg 709 Query: 365 ggtaggatgggcggaaccacgcagtacac 393 || |||||||||| || ||||||||||| Sbjct: 710 gggcggatgggcgggacgacgcagtacac 738
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 357 bits (180), Expect = 2e-95 Identities = 180/180 (100%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587 Score = 339 bits (171), Expect = 4e-90 Identities = 336/389 (86%), Gaps = 4/389 (1%) Strand = Plus / Plus Query: 5 tcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacatcgct 64 ||||||||||||||||| ||||||||||||||||||||||||| || | |||||||| Sbjct: 3073 tcagccagggcctgcgg-aagtacgacttcgacaacaccatggacgggctgtacatcgcg 3131 Query: 65 cctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaac 124 || || |||||||||||||| | ||||| ||| |||| ||||||||||| || |||||| Sbjct: 3132 ccggcattcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaac 3191 Query: 125 atcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccag 184 |||||| | || |||||| |||||||||||||||||||||| || || || || |||||| Sbjct: 3192 atcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccag 3251 Query: 185 tgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctg 244 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 3252 tgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctg 3311 Query: 245 gagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgca 304 ||||| || ||| || ||||| |||||||| ||| ||||| ||||||| ||||| || Sbjct: 3312 gagagcggcaac---ggcgagccggccaagctgatccggcagaggtaccgcgaggcggcc 3368 Query: 305 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 364 ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 3369 gacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcg 3428 Query: 365 ggtaggatgggcggaaccacgcagtacac 393 || |||||||||| || ||||||||||| Sbjct: 3429 ggccggatgggcgggacgacgcagtacac 3457 Score = 242 bits (122), Expect = 7e-61 Identities = 129/130 (99%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 1 tacgtcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacat 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5792 tacgtcagccagggcctgcgg-aagtacgacttcgacaacaccatgggaggcttctacat 5850 Query: 61 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5851 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 5910 Query: 121 caacatcaag 130 |||||||||| Sbjct: 5911 caacatcaag 5920 Score = 174 bits (88), Expect = 1e-40 Identities = 88/88 (100%) Strand = Plus / Plus Query: 129 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129 Query: 189 agcttgtgttcgccaagatgggcatcaa 216 |||||||||||||||||||||||||||| Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 351 bits (177), Expect = 1e-93 Identities = 300/341 (87%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 388 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 447 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||| Sbjct: 448 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaagggaaa 507 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 508 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 567 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 568 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 627 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 628 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 687 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 || ||||| || |||||||||| ||||| ||||||||||| Sbjct: 688 gccggtgccggccggatgggcggcaccacccagtacaccgt 728
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 351 bits (177), Expect = 1e-93 Identities = 300/341 (87%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 251 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 310 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 |||||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||| Sbjct: 311 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaagggaaa 370 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 371 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 430 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 431 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 490 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 491 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 550 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 || ||||| || |||||||||| ||||| ||||||||||| Sbjct: 551 gccggtgccggccggatgggcggcaccacccagtacaccgt 591
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 343 bits (173), Expect = 3e-91 Identities = 299/341 (87%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 87 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 327 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 386 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 || ||||| || |||||||||| ||||| ||||||||||| Sbjct: 387 gccggtgccggccggatgggcggcaccacccagtacaccgt 427
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 343 bits (173), Expect = 3e-91 Identities = 299/341 (87%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 281 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 340 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 341 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 400 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 401 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 460 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 461 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 520 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 521 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgat 580 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 || ||||| || |||||||||| ||||| ||||||||||| Sbjct: 581 gccggtgccggccggatgggcggcaccacccagtacaccgt 621
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 339 bits (171), Expect = 4e-90 Identities = 336/389 (86%), Gaps = 4/389 (1%) Strand = Plus / Plus Query: 5 tcagccagggcctgcggnaagtacgacttcgacaacaccatgggaggcttctacatcgct 64 ||||||||||||||||| ||||||||||||||||||||||||| || | |||||||| Sbjct: 504 tcagccagggcctgcgg-aagtacgacttcgacaacaccatggacgggctgtacatcgcg 562 Query: 65 cctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaac 124 || || |||||||||||||| | ||||| ||| |||| ||||||||||| || |||||| Sbjct: 563 ccggcattcatggacaagctcatcgtccacctcgccaagaacttcatgacactccccaac 622 Query: 125 atcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccag 184 |||||| | || |||||| |||||||||||||||||||||| || || || || |||||| Sbjct: 623 atcaaggttcctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccag 682 Query: 185 tgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctg 244 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 683 tgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgagcgccggtgagctg 742 Query: 245 gagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgca 304 ||||| || ||| || ||||| |||||||| ||| ||||| ||||||| ||||| || Sbjct: 743 gagagcggcaac---ggcgagccggccaagctgatccggcagaggtaccgcgaggcggcc 799 Query: 305 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 364 ||||| ||||| ||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 800 gacattatcaacaagggcaagatgtgctgcctcttcatcaacgacctggacgccggcgcg 859 Query: 365 ggtaggatgggcggaaccacgcagtacac 393 || |||||||||| || ||||||||||| Sbjct: 860 ggccggatgggcgggacgacgcagtacac 888
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 315 bits (159), Expect = 6e-83 Identities = 282/323 (87%) Strand = Plus / Plus Query: 71 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 130 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 22 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81 Query: 131 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 190 | || |||||| ||||||||||||||||||| || || |||||||| ||||| || ||| Sbjct: 82 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141 Query: 191 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 250 || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201 Query: 251 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 310 || ||||| |||||||| |||||||||||||||||||| ||||||||||| | ||| | Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261 Query: 311 atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 370 ||||||||||| ||||||| |||||||||||||||||| | ||||| || |||||| | Sbjct: 262 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 321 Query: 371 atgggcggaaccacgcagtacac 393 |||||||| ||||| |||||||| Sbjct: 322 atgggcggcaccacccagtacac 344
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 315 bits (159), Expect = 6e-83 Identities = 282/323 (87%) Strand = Plus / Plus Query: 71 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 130 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 417 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 476 Query: 131 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 190 | || |||||| ||||||||||||||||||| || || |||||||| ||||| || ||| Sbjct: 477 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 536 Query: 191 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 250 || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 537 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 596 Query: 251 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 310 || ||||| |||||||| |||||||||||||||||||| ||||||||||| | ||| | Sbjct: 597 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 656 Query: 311 atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 370 ||||||||||| ||||||| |||||||||||||||||| | ||||| || |||||| | Sbjct: 657 atcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcgc 716 Query: 371 atgggcggaaccacgcagtacac 393 |||||||| ||||| |||||||| Sbjct: 717 atgggcggcaccacccagtacac 739
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 568 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 627 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 628 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 687 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 688 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 747 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 748 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 807 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 808 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 867 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 868 gctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 568 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 627 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 628 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 687 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 688 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 747 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 748 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 807 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 808 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 867 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 868 gctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 597 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 656 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 657 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 716 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 717 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 776 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 777 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 836 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 837 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 896 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 897 gctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 479 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 538 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 539 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 598 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 599 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 658 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 659 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 718 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 719 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 778 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 779 gctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 482 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 541 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 542 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 601 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 602 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 661 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 662 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 721 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 722 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 781 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 782 gctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 471 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 530 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 531 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 590 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 591 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 650 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 651 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 710 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 711 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 770 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 771 gctggtgcgggtcgtatgggtggtactactcagtacac 808
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 479 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 538 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 539 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 598 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 599 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 658 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 659 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 718 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 719 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 778 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 779 gctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 482 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 541 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 542 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 601 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 602 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 661 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 662 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 721 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 722 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 781 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 782 gctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 313 bits (158), Expect = 2e-82 Identities = 293/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 597 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 656 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 657 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 716 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 717 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 776 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 777 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 836 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 837 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgac 896 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 897 gctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 305 bits (154), Expect = 6e-80 Identities = 310/362 (85%) Strand = Plus / Plus Query: 35 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 94 ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| || Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315 Query: 95 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 154 || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| ||| Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375 Query: 155 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 214 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435 Query: 215 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 274 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495 Query: 275 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 334 | |||||||| |||||||||| ||||| ||||| ||||| ||||| || |||||| | Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555 Query: 335 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 394 |||||||| |||||||| || |||||||| ||| | ||||| |||||||| || |||||| Sbjct: 556 ctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 615 Query: 395 gt 396 || Sbjct: 616 gt 617
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 305 bits (154), Expect = 6e-80 Identities = 307/358 (85%) Strand = Plus / Plus Query: 24 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 83 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 84 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 143 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 144 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 203 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 204 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 263 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 264 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 323 | || |||||||| |||||||| |||||||||| ||||| ||||| ||||||||||||| Sbjct: 671 aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730 Query: 324 agatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 381 | ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| Sbjct: 731 aaatgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaac 788
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 305 bits (154), Expect = 6e-80 Identities = 292/338 (86%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 394 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 453 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 175 ||||| ||||||||| | ||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 454 ctgcctaacatcaaggttccacttattttgggtatatggggaggcaaaggtcaaggtaaa 513 Query: 176 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 235 || ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 514 tccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgct 573 Query: 236 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 295 |||||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||| Sbjct: 574 ggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgt 633 Query: 296 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgac 355 ||||| || ||| ||||||||||||| |||||||| || ||| ||||||||||||||||| Sbjct: 634 gaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatcaacgatcttgac 693 Query: 356 gctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||| | ||||| || || || |||||||| Sbjct: 694 gctggtgcgggtcgtatgggtggtactactcagtacac 731
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 301 bits (152), Expect = 9e-79 Identities = 314/368 (85%) Strand = Plus / Plus Query: 26 tacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagctt 85 |||||||| ||||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct: 433 tacgacttggacaacaacatggatggattctacattgccccagctttcatggacaagctt 492 Query: 86 gttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttg 145 ||||| || || |||| |||| ||||||||| || ||||| ||| | || || |||||| Sbjct: 493 gttgttcacatcaccaagaactacatgacccttcctaacattaaggttcctcttatcttg 552 Query: 146 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 205 ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 553 ggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtctttgccaag 612 Query: 206 atgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagag 265 ||||| ||||||||||| ||||||||||||||||| |||| ||||||||||| ||||| Sbjct: 613 atgggaatcaaccccattatgatgagtgccggagaattggaaagtgggaacgccggagaa 672 Query: 266 ccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaag 325 ||||||||| | |||||||| ||||||||||||| || ||||| |||||||| || || Sbjct: 673 ccagccaagttgatcaggcaaaggtaccgtgaggccgccgacattatcaagaaagggaaa 732 Query: 326 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 385 ||||| |||||||| ||||||||||| |||||||| || ||| | ||||| |||||||| Sbjct: 733 atgtgttgcctctttatcaacgatctcgacgctggagccggtcgtatgggaggaaccaca 792 Query: 386 cagtacac 393 || ||||| Sbjct: 793 caatacac 800
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 285 bits (144), Expect = 5e-74 Identities = 277/323 (85%) Strand = Plus / Plus Query: 71 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 130 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 417 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 476 Query: 131 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 190 | || |||||| |||||||| ||||||||| || || |||||||| ||||| || ||| Sbjct: 477 gttcccctcatcctgggtatcgtgggaggcaaaggccagggaaaatcgttccaatgcgag 536 Query: 191 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 250 || || ||||||||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 537 ctggtcttcgccaagatgggcatcannnnnatcatgatgagcgccggcgagctggagagc 596 Query: 251 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 310 || ||||| |||||||| |||||||||||||||||||| ||||||||||| | ||| | Sbjct: 597 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 656 Query: 311 atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 370 ||||||||||| |||||||||||||||||||||||||| | ||||| || |||||| | Sbjct: 657 atcaagaagggcaagatgtgctgcctcttcatcaacgacttggacgccggcgcgggtcgc 716 Query: 371 atgggcggaaccacgcagtacac 393 |||||||| ||||| |||||||| Sbjct: 717 atgggcggcaccacccagtacac 739
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 274 bits (138), Expect = 2e-70 Identities = 273/318 (85%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535 Query: 113 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 172 || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595 Query: 173 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 232 ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 596 aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655 Query: 233 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 292 |||||||| ||||||| || ||||| |||||||| || ||| | |||||||| |||| Sbjct: 656 gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715 Query: 293 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 352 |||||||| || ||||| ||||||||||| ||||||| ||||| || ||||| |||||| Sbjct: 716 cgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatctt 775 Query: 353 gacgctggtgcgggtagg 370 || || ||||| |||||| Sbjct: 776 gatgcaggtgccggtagg 793
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 270 bits (136), Expect = 3e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256 Query: 205 gatgggcatcaa 216 |||||| ||||| Sbjct: 109255 gatggggatcaa 109244 Score = 208 bits (105), Expect = 1e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 108982 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 260 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 319 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719 Query: 320 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 357 || ||||||||| || ||||||||||| || ||||| Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 179 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 216 ||||||||||| || || |||||||||||||| ||||| Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 270 bits (136), Expect = 3e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133 Query: 205 gatgggcatcaa 216 |||||| ||||| Sbjct: 31132 gatggggatcaa 31121 Score = 208 bits (105), Expect = 1e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 30859 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 260 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 319 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596 Query: 320 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 357 || ||||||||| || ||||||||||| || ||||| Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 179 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 216 ||||||||||| || || |||||||||||||| ||||| Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 270 bits (136), Expect = 3e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395 Query: 205 gatgggcatcaa 216 |||||| ||||| Sbjct: 28304394 gatggggatcaa 28304383 Score = 208 bits (105), Expect = 1e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28304121 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 260 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 319 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858 Query: 320 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 357 || ||||||||| || ||||||||||| || ||||| Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 179 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 216 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 270 bits (136), Expect = 3e-69 Identities = 178/192 (92%) Strand = Plus / Minus Query: 25 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 84 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964 Query: 85 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 144 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904 Query: 145 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 204 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844 Query: 205 gatgggcatcaa 216 |||||| ||||| Sbjct: 28286843 gatggggatcaa 28286832 Score = 208 bits (105), Expect = 1e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28286570 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 260 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 319 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307 Query: 320 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 357 || ||||||||| || ||||||||||| || ||||| Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 179 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 216 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 266 bits (134), Expect = 5e-68 Identities = 305/362 (84%) Strand = Plus / Plus Query: 35 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 94 ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| || Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316 Query: 95 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 154 || ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| ||| Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376 Query: 155 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 214 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436 Query: 215 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 274 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496 Query: 275 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 334 | |||||||| |||||||||| || || ||||| ||||| ||||| || |||||| | Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgcc 556 Query: 335 ctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacacc 394 | ||||| || ||||| || |||||||| ||| | ||||| |||||||| || |||||| Sbjct: 557 ttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacacc 616 Query: 395 gt 396 || Sbjct: 617 gt 618
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 262 bits (132), Expect = 8e-67 Identities = 292/340 (85%), Gaps = 4/340 (1%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 463 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 522 Query: 116 ctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaagggtcaaggaaa 174 ||||| ||||||||| | ||||| || ||||| ||| |||||||||| |||||||| || Sbjct: 523 ctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaaaggtcaaggtaa 581 Query: 175 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 234 ||| ||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| Sbjct: 582 atccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatcatgatgagtgc 641 Query: 235 cggagagctggagagtgggaacgctggag-agccagccaagctcatcaggcagcggtacc 293 |||||||| |||||||| ||||| |||| || | | |||||| ||| | ||| |||||| Sbjct: 642 tggagagcttgagagtggaaacgcaggagaagtccg-caagcttatccgtcagaggtacc 700 Query: 294 gtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttg 353 ||||||| || ||| ||||||||||||| |||||||| || ||||||||||||||||||| Sbjct: 701 gtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttg 760 Query: 354 acgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| | ||||| || || || |||||||| Sbjct: 761 acgctggtgcgggtcgtatgggtggtactactcagtacac 800
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 254 bits (128), Expect = 2e-64 Identities = 278/328 (84%) Strand = Plus / Plus Query: 24 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 83 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 84 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 143 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 144 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 203 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 204 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 263 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 264 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 323 |||| || ||||| |||||||| |||| ||||| || || || || ||||||||||| | Sbjct: 671 agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730 Query: 324 agatgtgctgcctcttcatcaacgatct 351 | ||||||||||| || ||||||||||| Sbjct: 731 aaatgtgctgcctgtttatcaacgatct 758
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 248 bits (125), Expect = 1e-62 Identities = 278/329 (84%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| || Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515 Query: 113 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 172 | |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575 Query: 173 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 232 ||||||||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635 Query: 233 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 292 || ||||| |||| ||||| || || ||||||||||||||| | || ||||| ||||| Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695 Query: 293 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 352 | || || ||||| || |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctc 755 Query: 353 gacgctggtgcgggtaggatgggcggaac 381 || || || || ||||| ||||| ||||| Sbjct: 756 gatgcaggagctggtagaatgggtggaac 784
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 244 bits (123), Expect = 2e-61 Identities = 257/299 (85%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 54 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 113 ||||||| || ||||| || ||||||||||||||||| || || |||| |||||| ||| Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689 Query: 114 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 173 | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749 Query: 174 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 233 |||| ||||| ||||||||||||||||||||| | || || ||||||||||||||||||| Sbjct: 750 aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809 Query: 234 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 293 ||||||| |||| ||||| || || ||||||||||| ||| | |||||||| |||||| Sbjct: 810 ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869 Query: 294 gtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 351 ||||||| |||||| |||| |||||||||||||| ||| || |||||||||||||| Sbjct: 870 gtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatct 927
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 236 bits (119), Expect = 4e-59 Identities = 259/303 (85%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 |||||||| ||||||||||| |||||||||||||||| || || |||| ||||||||| Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528 Query: 113 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 172 ||| |||||||||||||| | || ||||| | |||||||||||||||||||| |||||| Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588 Query: 173 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 232 || || ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648 Query: 233 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 292 || |||||| |||| ||||| || || ||||||||||| || | ||||||||| | ||| Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708 Query: 293 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 351 ||||| |||||||| ||||| ||||| |||||||| ||| || |||||||||||||| Sbjct: 709 cgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatct 767 Query: 352 tga 354 ||| Sbjct: 768 tga 770
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 234 bits (118), Expect = 2e-58 Identities = 291/346 (84%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 52 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 111 ||||||||| || ||| |||||||||||||| ||||||| || || |||| |||| | | Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573 Query: 112 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 171 || | |||| ||||||||| | || || ||||||||||| ||||||||||| |||||||| Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633 Query: 172 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 231 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 634 taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693 Query: 232 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 291 ||| ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||| |||| Sbjct: 694 tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753 Query: 292 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 350 ||||||||| |||||||| || ||||| |||||||| ||| || ||||||||||||| Sbjct: 754 ccgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatc 812 Query: 351 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 | ||||| ||||| || | ||||| || ||||| || |||||||| Sbjct: 813 tcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgt 858
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 220 bits (111), Expect = 3e-54 Identities = 258/307 (84%) Strand = Plus / Plus Query: 24 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 83 ||||| |||| ||||||| || || || |||||||| ||||| ||||| ||||||||| Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495 Query: 84 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 143 ||||||| || || |||| |||||||||||| |||||||||||||| | || ||||| Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555 Query: 144 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 203 | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || |||| Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615 Query: 204 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 263 ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || |||| Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675 Query: 264 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 323 ||||||| || | || |||||| | |||||||| || ||||| | ||||||||||| | Sbjct: 676 agccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaagggaa 735 Query: 324 agatgtg 330 ||||||| Sbjct: 736 agatgtg 742
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 212 bits (107), Expect = 6e-52 Identities = 287/347 (82%) Strand = Plus / Plus Query: 50 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 109 ||||||||||| || ||||||||||||||||| |||||||| || || |||| |||||| Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493 Query: 110 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 169 |||| |||||||||||||| | ||||||||||||||| | ||||||||||| |||||| Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553 Query: 170 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 229 || ||||||||||| ||||||||||| ||| |||||||| ||||||||||| |||||| Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613 Query: 230 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 289 ||||| ||||| |||| ||||| || || ||||||||||| || | || ||||| || Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaagg 673 Query: 290 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 349 ||| | ||||| || || || |||| ||| || || ||||| || ||||||||||||||| Sbjct: 674 tacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgat 733 Query: 350 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 396 || || || || || ||||| ||||| ||||| || || |||||||| Sbjct: 734 ctcgatgcaggagctggtagaatgggtggaactacccaatacaccgt 780
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 210 bits (106), Expect = 3e-51 Identities = 249/294 (84%), Gaps = 2/294 (0%) Strand = Plus / Plus Query: 62 gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 121 ||||| ||||| ||||||||||||||||| || || |||| |||||||||||||| || Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544 Query: 122 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 181 ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || ||| Sbjct: 545 aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604 Query: 182 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 241 ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 605 cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664 Query: 242 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 301 |||| ||||| ||||| ||||| || || ||||| |||||||| |||||||||| || Sbjct: 665 ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724 Query: 302 gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttga 354 || ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 725 gccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttga 777
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 208 bits (105), Expect = 1e-50 Identities = 273/329 (82%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532 Query: 113 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 172 || |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592 Query: 173 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 232 ||||||||||| ||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652 Query: 233 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 292 || ||||| | || ||||| || || ||||||||||| || | |||||||| ||||| Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtac 712 Query: 293 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 352 | ||||| || || || |||| |||||| || ||||| ||||||||||||||||||||| Sbjct: 713 agagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatctt 772 Query: 353 gacgctggtgcgggtaggatgggcggaac 381 || || || || ||||| ||||| ||||| Sbjct: 773 gatgcaggagccggtagaatgggtggaac 801
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 208 bits (105), Expect = 1e-50 Identities = 273/329 (82%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 ||||||||||||||| |||||||||||||||||||||| || || |||| |||||| || Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485 Query: 113 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 172 | |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545 Query: 173 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 232 ||||| ||||||||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605 Query: 233 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 292 |||||||| |||| ||||| || || |||||||| || || | || ||||| ||||| Sbjct: 606 gccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtac 665 Query: 293 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 352 | ||||| ||||| || |||| ||| || || || || |||||||||||||||||||| Sbjct: 666 agagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatctc 725 Query: 353 gacgctggtgcgggtaggatgggcggaac 381 || || || || ||||| ||||| ||||| Sbjct: 726 gatgcaggagctggtagaatgggtggaac 754
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 184 bits (93), Expect = 1e-43 Identities = 192/221 (86%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 161 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 220 ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||| || Sbjct: 1 aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60 Query: 221 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 280 |||||||||||||||||||| | || ||||| ||||||| ||||||||| ||||||||| Sbjct: 61 atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118 Query: 281 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 340 || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | ||| Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177 Query: 341 atcaacgatcttgacgctggtgcgggtaggatgggcggaac 381 |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaac 218
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 167 bits (84), Expect = 3e-38 Identities = 228/276 (82%) Strand = Plus / Plus Query: 55 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 114 |||||| ||||||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215 Query: 115 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 174 | |||| ||||||||| | || ||||| | ||||| ||||||||||||||||||||||| Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275 Query: 175 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 234 || ||||| ||||||||||| || || || |||| |||||||| || ||||||||||| Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335 Query: 235 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 294 ||| || ||||||||||| | || |||||||| || || | ||||| |||| ||||| Sbjct: 336 cggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccg 395 Query: 295 tgaggctgcagacatgatcaagaagggtaagatgtg 330 ||| || || ||||| ||||||| || |||||||| Sbjct: 396 tgaagcggccgacattgtcaagaaaggaaagatgtg 431
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 161 bits (81), Expect = 2e-36 Identities = 150/173 (86%) Strand = Plus / Minus Query: 221 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 280 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 281 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 340 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436 Query: 341 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 14383 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 134 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 193 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674 Query: 194 gtgttcgccaagatgggcatcaa 216 || | ||||||||||| ||||| Sbjct: 14673 gtcatggccaagatgggtatcaa 14651 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851 Query: 116 ctgcccaacatcaag 130 ||||| ||||||||| Sbjct: 14850 ctgcctaacatcaag 14836
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 161 bits (81), Expect = 2e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 221 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 280 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 281 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 340 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847 Query: 341 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 ||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 2900 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 134 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 193 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609 Query: 194 gtgttcgccaagatgggcatcaa 216 || | ||||||||||| ||||| Sbjct: 2610 gtcatggccaagatgggtatcaa 2632 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 56 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 115 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432 Query: 116 ctgcccaacatcaag 130 ||||| ||||||||| Sbjct: 2433 ctgcctaacatcaag 2447
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 127 bits (64), Expect = 3e-26 Identities = 190/232 (81%) Strand = Plus / Plus Query: 162 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 221 |||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||||||| Sbjct: 7 agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66 Query: 222 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 281 ||||||||||||| |||||||| || ||||| || || ||||||||||| || | |||| Sbjct: 67 tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126 Query: 282 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 341 | ||| | |||||||| || | ||||| |||| ||| || |||||||| || || |||| Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186 Query: 342 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||| || || || || ||| | ||||| |||||||| || ||||| Sbjct: 187 tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacac 238
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 |||||||||||||||||||||||| ||||||| || ||||| |||||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 |||||||| |||| |||||||| || ||||| ||||||||||| ||||||| ||||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586 Query: 337 cttcatcaacgatcttgacgctggtgcgggtagg 370 || ||||| |||||||| || ||||| |||||| Sbjct: 587 atttatcaatgatcttgatgcaggtgccggtagg 620 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 137 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 196 ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245 Query: 197 ttcgccaagatgggcatcaa 216 || ||||||||||| ||||| Sbjct: 246 tttgccaagatgggaatcaa 265 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 53 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 112 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 6 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65 Query: 113 ac 114 || Sbjct: 66 ac 67
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 113 bits (57), Expect = 4e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 207 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 266 ||||||||| ||||||| | ||| |||||| ||||||||| ||| ||||| || |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 267 cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 326 | |||||||||||| | ||||| ||||| |||||| | |||| | |||||||| |||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562 Query: 327 tgtgctgcctcttcatcaacgatcttgacgctggtgc 363 |||||| |||||||||||||||||| ||||||||||| Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgc 1599 Score = 65.9 bits (33), Expect = 9e-08 Identities = 102/125 (81%) Strand = Plus / Plus Query: 50 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 109 |||||||||||| ||||||||||| |||| ||| | ||||| | |||| |||||| Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187 Query: 110 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 169 ||| ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccag 1247 Query: 170 ggaaa 174 ||||| Sbjct: 1248 ggaaa 1252
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 105 bits (53), Expect = 1e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 285
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 105 bits (53), Expect = 1e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacac 293
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 129 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 188 |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||| Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297 Query: 189 agcttgtgttcgccaag 205 ||||||||||||||||| Sbjct: 2298 agcttgtgttcgccaag 2314 Score = 95.6 bits (48), Expect = 1e-16 Identities = 116/136 (85%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 |||||||||||||||||||||||| |||| ||||| || || ||||||||||| ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 335 |||||||| ||||||||||||| |||||| |||| |||||||||||||| ||| | Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539 Query: 336 tcttcatcaacgatct 351 | |||||||||||||| Sbjct: 2540 tattcatcaacgatct 2555 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 52 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 111 ||||||||| || ||||| || ||||||||||||||||| || || |||| |||||| | Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126 Query: 112 gaccctgcccaacatcaag 130 || | |||||||||||||| Sbjct: 2127 gaacttgcccaacatcaag 2145
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 105 bits (53), Expect = 1e-19 Identities = 206/257 (80%) Strand = Plus / Plus Query: 104 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 163 |||||| ||||||| || ||||| ||| | || ||||| ||||| | |||||||| || Sbjct: 522 aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581 Query: 164 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 223 ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || Sbjct: 582 ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641 Query: 224 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 283 ||||||||||| || || | || |||||||| || ||||||||||| || | |||||| Sbjct: 642 atgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcagg 701 Query: 284 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 343 || | ||| | ||||| || || || |||||||| || || ||||| || || || ||| Sbjct: 702 caaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatc 761 Query: 344 aacgatcttgacgctgg 360 ||||||||||| ||||| Sbjct: 762 aacgatcttgatgctgg 778
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 217 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 276 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 277 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 336 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 337 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 393 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 79.8 bits (40), Expect = 6e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 128 aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 187 ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482 Query: 188 gagcttgtgttcgccaagatgggcatca 215 |||||||| || ||||||||||| |||| Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454 Score = 79.8 bits (40), Expect = 6e-12 Identities = 124/152 (81%) Strand = Plus / Minus Query: 224 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 283 ||||||||||||||||| |||| ||||| || || |||||||| || ||| | || ||| Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203 Query: 284 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 343 || ||||||||||||| | ||||| |||| || || ||||||||||| ||||||||| Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143 Query: 344 aacgatcttgacgctggtgcgggtaggatggg 375 || |||||||| || || || ||||| ||||| Sbjct: 7142 aatgatcttgatgcaggagctggtagaatggg 7111
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 146 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 205 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874 Query: 206 atgggcatcaa 216 ||||||||||| Sbjct: 104873 atgggcatcaa 104863 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 221 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 270 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134 Score = 40.1 bits (20), Expect = 5.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 326 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 385 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019 Query: 386 cagtacac 393 |||||||| Sbjct: 104018 cagtacac 104011
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 146 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 205 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899 Query: 206 atgggcatcaa 216 ||||||||||| Sbjct: 83898 atgggcatcaa 83888 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 35 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 90 ||||||||||||| || || ||||| || |||||||| ||||||||||||||||| Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/50 (86%) Strand = Plus / Minus Query: 221 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 270 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159 Score = 40.1 bits (20), Expect = 5.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 326 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 385 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044 Query: 386 cagtacac 393 |||||||| Sbjct: 83043 cagtacac 83036
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 99 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggag 158 |||| ||||||||| ||||||||| |||||| | || ||||| ||||||||||||| | Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtg 465 Query: 159 gcaaggg 165 ||||||| Sbjct: 466 gcaaggg 472 Score = 48.1 bits (24), Expect = 0.022 Identities = 75/92 (81%) Strand = Plus / Plus Query: 305 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 364 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671 Query: 365 ggtaggatgggcggaaccacgcagtacaccgt 396 || | ||||||| ||||| ||||||||||| Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgt 703
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 48.1 bits (24), Expect = 0.022 Identities = 75/92 (81%) Strand = Plus / Plus Query: 305 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 364 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883 Query: 365 ggtaggatgggcggaaccacgcagtacaccgt 396 || | ||||||| ||||| ||||||||||| Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgt 1915 Score = 46.1 bits (23), Expect = 0.086 Identities = 44/51 (86%) Strand = Plus / Plus Query: 115 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 165 ||||||||| |||||| | || ||||| ||||||||||||| |||||||| Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Plus Query: 326 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 381 ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| Sbjct: 55 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaac 110
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccctgcccaacatcaagatc 133 |||||||||||||||||||| Sbjct: 1130357 ccctgcccaacatcaagatc 1130376
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ttccagtgtgagcttgtgtt 198 |||||||||||||||||||| Sbjct: 97287 ttccagtgtgagcttgtgtt 97268
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ggcttctacatcgctcctgctttc 73 ||||||| |||||||||||||||| Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067
>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence Length = 141442 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gtccatctctccaaaaactt 108 |||||||||||||||||||| Sbjct: 63248 gtccatctctccaaaaactt 63229
>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ccctgcccaacatcaagatc 133 |||||||||||||||||||| Sbjct: 7760 ccctgcccaacatcaagatc 7741
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccctgcccaacatcaagatc 133 |||||||||||||||||||| Sbjct: 1147720 ccctgcccaacatcaagatc 1147739
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tcgccaagatgggcatcaac 217 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ggcttctacatcgctcctgctttc 73 ||||||| |||||||||||||||| Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 ccctgcccaacatcaagatc 133 |||||||||||||||||||| Sbjct: 1144872 ccctgcccaacatcaagatc 1144891
>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1 outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ), and LpxA (lpxA) genes, complete cds Length = 8895 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 ccctgcccaacatcaagatc 133 |||||||||||||||||||| Sbjct: 8238 ccctgcccaacatcaagatc 8219
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tggagagtgggaacgctgga 262 |||||||||||||||||||| Sbjct: 90247 tggagagtgggaacgctgga 90228 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,327,123 Number of Sequences: 3902068 Number of extensions: 3327123 Number of successful extensions: 60512 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60284 Number of HSP's gapped (non-prelim): 199 length of query: 396 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 374 effective length of database: 17,147,199,772 effective search space: 6413052714728 effective search space used: 6413052714728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
