ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21l20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
2dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
3dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 3e-91
4dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 8e-89
5gb|AY104285.1| Zea mays PCO088782 mRNA sequence 295 7e-77
6gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
10ref|NM_104204.2| Arabidopsis thaliana unknown protein AT1G53260 ... 90 8e-15
11gb|AY735538.1| Arabidopsis thaliana chromosome 1 hypothetical pr... 90 8e-15
12gb|AY735537.1| Arabidopsis thaliana chromosome 1 hypothetical pr... 90 8e-15
13gb|AY954765.1| Arabidopsis thaliana hypothetical protein (At1g53... 90 8e-15
14ref|NM_112362.2| Arabidopsis thaliana unknown protein AT3G15000 ... 70 7e-09
15gb|AF428427.1|AF428427 Arabidopsis thaliana AT3g15000/K15M2_14 m... 70 7e-09
16gb|BT015868.1| Arabidopsis thaliana At3g15000 mRNA, complete cds 68 3e-08
17emb|BX823328.1|CNS0A5D6 Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
18gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana... 46 0.10
19dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.41
20gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.6
21emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on ch... 42 1.6
22emb|X82639.1|MRZP3 M.radiata mRNA for zona pellucida glycoprotein-3 42 1.6
23gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.4
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.4
25gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genom... 40 6.4
26emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.4
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.4
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
29gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, co... 40 6.4
30gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Can... 40 6.4

>dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E06, full
           insert sequence
          Length = 1353

 Score =  343 bits (173), Expect = 3e-91
 Identities = 269/301 (89%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
           ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 406 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 465

                                                                       
Query: 81  ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140
           |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 466 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatatctg 525

                                                                       
Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200
           ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| 
Sbjct: 526 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 585

                                                                       
Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260
           ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| 
Sbjct: 586 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 645

                                                                       
Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320
           ||||| || |||||| | |||||||||||||| ||||| || || |||||||||||||||
Sbjct: 646 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 705

            
Query: 321 a 321
           |
Sbjct: 706 a 706



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>dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A08, full
           insert sequence
          Length = 1437

 Score =  343 bits (173), Expect = 3e-91
 Identities = 269/301 (89%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
           ||||||||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||
Sbjct: 433 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 492

                                                                       
Query: 81  ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140
           |||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| 
Sbjct: 493 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatacctg 552

                                                                       
Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200
           |||||||||||||||||||| ||||||||||| |||||| ||||  |||| |||||||| 
Sbjct: 553 gatgtcagaaataaggactacggaggagaaccttttataaatggggaagccgttccttat 612

                                                                       
Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260
           ||||| || ||||| ||||||||||||||||||||||| ||||||||||| |||  ||||
Sbjct: 613 gaccctaagtaccacgaggagtgggtgagaaacaatgcgcgtgccaatgaaagaagccgg 672

                                                                       
Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320
           ||||| || |||||| | |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 673 cgcaatgataggcctagaaactttgacaggtcaaggaattttgagaggagaagggagaac 732

            
Query: 321 a 321
           |
Sbjct: 733 a 733



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>dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H21, full
           insert sequence
          Length = 1435

 Score =  343 bits (173), Expect = 3e-91
 Identities = 269/301 (89%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
           ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 404 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 463

                                                                       
Query: 81  ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140
           |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| || 
Sbjct: 464 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatatctg 523

                                                                       
Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200
           ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| 
Sbjct: 524 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 583

                                                                       
Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260
           ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| 
Sbjct: 584 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 643

                                                                       
Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320
           ||||| || |||||| | |||||||||||||| ||||| || || |||||||||||||||
Sbjct: 644 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 703

            
Query: 321 a 321
           |
Sbjct: 704 a 704



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>dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036D20, full
           insert sequence
          Length = 1435

 Score =  335 bits (169), Expect = 8e-89
 Identities = 268/301 (89%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
           ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 404 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 463

                                                                       
Query: 81  ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140
           |||||||||||||||||||||||||| |||||||| ||||||||||| || || || || 
Sbjct: 464 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcgtatctg 523

                                                                       
Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200
           ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| 
Sbjct: 524 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 583

                                                                       
Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260
           ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||  |||| 
Sbjct: 584 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 643

                                                                       
Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320
           ||||| || |||||| | |||||||||||||| ||||| || || |||||||||||||||
Sbjct: 644 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 703

            
Query: 321 a 321
           |
Sbjct: 704 a 704



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>gb|AY104285.1| Zea mays PCO088782 mRNA sequence
          Length = 1701

 Score =  295 bits (149), Expect = 7e-77
 Identities = 263/301 (87%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
           ||||| |||||||| || ||| | ||||| ||||  |||||||| || ||||||||||||
Sbjct: 465 aagatatactctgtatcgactcgtcattactttggctttggtgctcttgtatctgaggaa 524

                                                                       
Query: 81  ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140
           || || |||||||| |||||  | || |||||||| ||||||||||||||||||||| | 
Sbjct: 525 ctttcttacaaactgaaagaaattcccaaggtccgctgggttcttcctgattcatacttg 584

                                                                       
Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200
           ||||||| ||| |||||||||||||| ||||| || ||| |||| |||||||||||||| 
Sbjct: 585 gatgtcaaaaacaaggactatggaggcgaacccttcataaatgggcaagctgttccttat 644

                                                                       
Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260
           || || ||||| |||||||||||||||||||||||||||||||||||||| |||  ||||
Sbjct: 645 gatcctaaatatcatgaggagtgggtgagaaacaatgcccgtgccaatgacagaaaccgg 704

                                                                       
Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320
           ||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 705 cgcaatgataggcctcgcaactttgacaggtcaaggaactttgacaggagaagggagaac 764

            
Query: 321 a 321
           |
Sbjct: 765 a 765



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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 164   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
             ||||||||| |||||| ||||  |||| |||||||| ||||| || ||||| ||||||||
Sbjct: 38399 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 38340

                                                                         
Query: 224   ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283
             ||||||||||||||| ||||||||||| |||  ||||||||| || |||||| | |||||
Sbjct: 38339 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 38280

                                                   
Query: 284   tgacaggtcgaggaactttgaaaggagaagggagaaca 321
             ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 38279 tgacaggtcaaggaattttgagaggagaagggagaaca 38242



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 21    aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
             ||||||||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||
Sbjct: 39420 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 39361

                                
Query: 81    ctctcctacaaactcaaag 99
             |||||||||||||||||||
Sbjct: 39360 ctctcctacaaactcaaag 39342



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 98    agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
             ||||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct: 39248 agagttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataagga 39189

                      
Query: 158   ctatggagg 166
             ||| |||||
Sbjct: 39188 ctacggagg 39180



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                            
Query: 164      aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
                ||||||||| |||||| ||||  |||| |||||||| ||||| || ||||| ||||||||
Sbjct: 19442992 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 19442933

                                                                            
Query: 224      ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283
                ||||||||||||||| ||||||||||| |||  ||||||||| || |||||| | |||||
Sbjct: 19442932 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 19442873

                                                      
Query: 284      tgacaggtcgaggaactttgaaaggagaagggagaaca 321
                ||||||||| ||||| ||||| ||||||||||||||||
Sbjct: 19442872 tgacaggtcaaggaattttgagaggagaagggagaaca 19442835



 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                           
Query: 164     aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
               |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 2437444 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 2437385

                                                                           
Query: 224     ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283
               ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 2437384 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 2437325

                                                     
Query: 284     tgacaggtcgaggaactttgaaaggagaagggagaaca 321
               ||||||||| ||||| || || ||||||||||||||||
Sbjct: 2437324 tgacaggtcaaggaatttcgagaggagaagggagaaca 2437287



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                            
Query: 21       aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
                ||||||||||| ||||||||| ||||||| ||||||||||| || || ||||||||||||
Sbjct: 19444013 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 19443954

                                   
Query: 81       ctctcctacaaactcaaag 99
                |||||||||||||||||||
Sbjct: 19443953 ctctcctacaaactcaaag 19443935



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                           
Query: 21      aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
               ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 2438396 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 2438337

                                  
Query: 81      ctctcctacaaactcaaag 99
               |||||||||||||||||||
Sbjct: 2438336 ctctcctacaaactcaaag 2438318



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 98       agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
                ||||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct: 19443841 agagttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataagga 19443782

                         
Query: 158      ctatggagg 166
                ||| |||||
Sbjct: 19443781 ctacggagg 19443773



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                           
Query: 98      agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
               ||||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||
Sbjct: 2438226 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 2438167

                        
Query: 158     ctatggagg 166
               |||||||||
Sbjct: 2438166 ctatggagg 2438158



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>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0095O23
          Length = 159792

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                          
Query: 164    aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
              |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 115854 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 115795

                                                                          
Query: 224    ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283
              ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 115794 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 115735

                                                    
Query: 284    tgacaggtcgaggaactttgaaaggagaagggagaaca 321
              ||||||||| ||||| || || ||||||||||||||||
Sbjct: 115734 tgacaggtcaaggaatttcgagaggagaagggagaaca 115697



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 21     aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
              ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 116806 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 116747

                                 
Query: 81     ctctcctacaaactcaaag 99
              |||||||||||||||||||
Sbjct: 116746 ctctcctacaaactcaaag 116728



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                          
Query: 98     agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
              ||||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||
Sbjct: 116636 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 116577

                       
Query: 158    ctatggagg 166
              |||||||||
Sbjct: 116576 ctatggagg 116568



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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 164   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
             |||||| || |||||| ||||| ||||||||||||| ||||| || ||||||||||||||
Sbjct: 24034 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 23975

                                                                         
Query: 224   ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283
             ||||||||||||||| ||||||||||| ||  |||| ||||| || |||||| | |||||
Sbjct: 23974 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 23915

                                                   
Query: 284   tgacaggtcgaggaactttgaaaggagaagggagaaca 321
             ||||||||| ||||| || || ||||||||||||||||
Sbjct: 23914 tgacaggtcaaggaatttcgagaggagaagggagaaca 23877



 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 21    aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80
             ||||| ||||| ||||||||| ||||||| |||||||||||||| || ||||||||||||
Sbjct: 24986 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 24927

                                
Query: 81    ctctcctacaaactcaaag 99
             |||||||||||||||||||
Sbjct: 24926 ctctcctacaaactcaaag 24908



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 98    agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
             ||||||||| |||||||| ||||||||||| || ||||| || |||||||||||||||||
Sbjct: 24816 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 24757

                      
Query: 158   ctatggagg 166
             |||||||||
Sbjct: 24756 ctatggagg 24748



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>ref|NM_104204.2| Arabidopsis thaliana unknown protein AT1G53260 mRNA, complete cds
          Length = 1408

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                       
Query: 94  tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153
           |||||||||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||
Sbjct: 543 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 602

                                                                       
Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213
           | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || |
Sbjct: 603 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 662

                                    
Query: 214 atgaggagtgggtgagaaacaatgc 238
           |||| || ||| | |||||||||||
Sbjct: 663 atgaagaatggataagaaacaatgc 687



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>gb|AY735538.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260
           mRNA, complete cds, alternatively spliced
          Length = 1335

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                       
Query: 94  tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153
           |||||||||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||
Sbjct: 542 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 601

                                                                       
Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213
           | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || |
Sbjct: 602 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 661

                                    
Query: 214 atgaggagtgggtgagaaacaatgc 238
           |||| || ||| | |||||||||||
Sbjct: 662 atgaagaatggataagaaacaatgc 686



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>gb|AY735537.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260
           mRNA, complete cds, alternatively spliced
          Length = 1447

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                       
Query: 94  tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153
           |||||||||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||
Sbjct: 543 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 602

                                                                       
Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213
           | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || |
Sbjct: 603 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 662

                                    
Query: 214 atgaggagtgggtgagaaacaatgc 238
           |||| || ||| | |||||||||||
Sbjct: 663 atgaagaatggataagaaacaatgc 687



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>gb|AY954765.1| Arabidopsis thaliana hypothetical protein (At1g53260) mRNA,
           complete cds
          Length = 816

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                       
Query: 94  tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153
           |||||||||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||
Sbjct: 77  tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 136

                                                                       
Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213
           | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || |
Sbjct: 137 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 196

                                    
Query: 214 atgaggagtgggtgagaaacaatgc 238
           |||| || ||| | |||||||||||
Sbjct: 197 atgaagaatggataagaaacaatgc 221



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>ref|NM_112362.2| Arabidopsis thaliana unknown protein AT3G15000 mRNA, complete cds
          Length = 1556

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 176/223 (78%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggatgaagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctg 75
           |||||||||||||||| || |||||||||   || | ||||||||| || || || || |
Sbjct: 461 ggatgaagatctactcggtttcaactaggtgctactatgcttttggggcacttgtgtcag 520

                                                                       
Query: 76  aggaactctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcat 135
           | || || ||  ||||  | ||||||||| | || || || |||||||||||||| || |
Sbjct: 521 aagatctttctcacaagttaaaagagttgtcaaatgtgcgctgggttcttcctgactctt 580

                                                                       
Query: 136 acctcgatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttc 195
           |||| ||||| || || || ||||||||||| ||||| || || |||||  | |||||||
Sbjct: 581 acctggatgtgaggaacaaagactatggaggggaacctttcatcgatgggaaggctgttc 640

                                                      
Query: 196 cttacgaccccaaataccatgaggagtgggtgagaaacaatgc 238
           |||| || || || ||||| ||||||||| | || ||||||||
Sbjct: 641 cttatgatcctaagtaccacgaggagtggataaggaacaatgc 683



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>gb|AF428427.1|AF428427 Arabidopsis thaliana AT3g15000/K15M2_14 mRNA, complete cds
          Length = 1459

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 176/223 (78%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggatgaagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctg 75
           |||||||||||||||| || |||||||||   || | ||||||||| || || || || |
Sbjct: 461 ggatgaagatctactcggtttcaactaggtgctactatgcttttggggcacttgtgtcag 520

                                                                       
Query: 76  aggaactctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcat 135
           | || || ||  ||||  | ||||||||| | || || || |||||||||||||| || |
Sbjct: 521 aagatctttctcacaagttaaaagagttgtcaaatgtgcgctgggttcttcctgactctt 580

                                                                       
Query: 136 acctcgatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttc 195
           |||| ||||| || || || ||||||||||| ||||| || || |||||  | |||||||
Sbjct: 581 acctggatgtgaggaacaaagactatggaggggaacctttcatcgatgggaaggctgttc 640

                                                      
Query: 196 cttacgaccccaaataccatgaggagtgggtgagaaacaatgc 238
           |||| || || || ||||| ||||||||| | || ||||||||
Sbjct: 641 cttatgatcctaagtaccacgaggagtggataaggaacaatgc 683



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>gb|BT015868.1| Arabidopsis thaliana At3g15000 mRNA, complete cds
          Length = 1188

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 117 tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 176
           |||||||||||||| || ||||| ||||| || || || ||||||||||| ||||| || 
Sbjct: 505 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaacctttc 564

                                                                       
Query: 177 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 236
           || |||||  | ||||||||||| || || || ||||| ||||||||| | || ||||||
Sbjct: 565 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 624

             
Query: 237 gc 238
           ||
Sbjct: 625 gc 626



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>emb|BX823328.1|CNS0A5D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS22ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1445

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 115/143 (80%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  aaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataag 155
           ||||||||| | || || || |||||||||||||| || ||||| ||||| || || || 
Sbjct: 517 aaagagttgtcaaatgtgcgctgggttcttcctgactcttacctggatgtgaggaacaaa 576

                                                                       
Query: 156 gactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccat 215
           ||||||||||| ||| | || || |||||  | ||||||||||| || || || ||||| 
Sbjct: 577 gactatggaggggaa-ctttcatcgatgggaaggctgttccttatgatcctaagtaccac 635

                                  
Query: 216 gaggagtgggtgagaaacaatgc 238
           ||||||||| | || ||||||||
Sbjct: 636 gaggagtggataaggaacaatgc 658



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>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I,
             complete sequence
          Length = 130235

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                         
Query: 164   aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223
             ||||||||| || || |||||| | ||||||||||| ||||| || || ||||| || ||
Sbjct: 58967 aggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaagaatg 58908

                            
Query: 224   ggtgagaaacaatgc 238
             | | |||||||||||
Sbjct: 58907 gataagaaacaatgc 58893



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 98    agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157
             |||||||||||||||    ||||||||||||||||| ||| | ||||  |  ||||| ||
Sbjct: 59164 agagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaaga 59105

                      
Query: 158   ctatggagg 166
             |||||||||
Sbjct: 59104 ctatggagg 59096



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>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2
          Length = 79279

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 117   tgggttcttcctgattcatacctcgatgtcagaaataaggactatggagg 166
             |||||||||||||| || ||||| ||||| || || || |||||||||||
Sbjct: 47112 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggagg 47161



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 16    ggatgaagatctactctgtgtcaactagg 44
             |||||||||||||||| || |||||||||
Sbjct: 46927 ggatgaagatctactcggtttcaactagg 46955



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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    gggcccgccaccgccttcggg 427
              |||||||||||||||||||||
Sbjct: 328931 gggcccgccaccgccttcggg 328951



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>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5'
              end of the ENG gene for endoglin (Osler-Rendu-Weber
              syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for
              adenylate kinase 1, the ST6GALNAC6 gene for
              CMP-NeuAC:(beta)-N-acetylgalactosaminide
              (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the
              SIAT7D gene for sialyltransferase 7D
              ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
              3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
              (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for
              dolichyl-phosphate mannosyltransferase polypeptide 2,
              regulatory subunit (MGC21559), the gene for a novel protien
              containing FLJ00179, a novel gene and ten CpG islands,
              complete sequence
          Length = 164201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 339    gggcctgctccaccagggcagagcc 363
              ||||||||||||| |||||||||||
Sbjct: 156330 gggcctgctccacaagggcagagcc 156354



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>emb|X82639.1|MRZP3 M.radiata mRNA for zona pellucida glycoprotein-3
          Length = 1299

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 289 ggtcgaggaactttgaaaggagaag 313
           ||||||||||||||||||| |||||
Sbjct: 777 ggtcgaggaactttgaaagcagaag 753



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 379     atgctgctcctccaaggcgt 398
               ||||||||||||||||||||
Sbjct: 2993521 atgctgctcctccaaggcgt 2993502



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      gagaaccatttatagatgga 185
                ||||||||||||||||||||
Sbjct: 25855639 gagaaccatttatagatgga 25855620



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>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete
             sequence
          Length = 44761

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   gagaaccatttatagatgga 185
             ||||||||||||||||||||
Sbjct: 26582 gagaaccatttatagatgga 26563



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>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7
          Length = 344615

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    ggcctgctccaccagggcag 359
              ||||||||||||||||||||
Sbjct: 195393 ggcctgctccaccagggcag 195412



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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    cgggcctgctccaccagggc 357
              ||||||||||||||||||||
Sbjct: 689459 cgggcctgctccaccagggc 689440



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      gagaaccatttatagatgga 185
                ||||||||||||||||||||
Sbjct: 25946948 gagaaccatttatagatgga 25946929



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>gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, complete sequence
          Length = 199878

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    ctttgaaaggagaagggaga 318
              ||||||||||||||||||||
Sbjct: 123988 ctttgaaaggagaagggaga 124007



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>gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 129055

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ccatgaggagtgggtgagaa 231
             ||||||||||||||||||||
Sbjct: 19751 ccatgaggagtgggtgagaa 19732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,172,262
Number of Sequences: 3902068
Number of extensions: 4172262
Number of successful extensions: 79666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79437
Number of HSP's gapped (non-prelim): 219
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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