| Clone Name | baal21l20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E06, full insert sequence Length = 1353 Score = 343 bits (173), Expect = 3e-91 Identities = 269/301 (89%) Strand = Plus / Plus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 406 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 465 Query: 81 ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140 |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| || Sbjct: 466 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatatctg 525 Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200 ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| Sbjct: 526 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 585 Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260 ||||| || ||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 586 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 645 Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320 ||||| || |||||| | |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 646 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 705 Query: 321 a 321 | Sbjct: 706 a 706
>dbj|AK106007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A08, full insert sequence Length = 1437 Score = 343 bits (173), Expect = 3e-91 Identities = 269/301 (89%) Strand = Plus / Plus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||||||||| ||||||||| ||||||| ||||||||||| || || |||||||||||| Sbjct: 433 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 492 Query: 81 ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140 |||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| Sbjct: 493 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatacctg 552 Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200 |||||||||||||||||||| ||||||||||| |||||| |||| |||| |||||||| Sbjct: 553 gatgtcagaaataaggactacggaggagaaccttttataaatggggaagccgttccttat 612 Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260 ||||| || ||||| ||||||||||||||||||||||| ||||||||||| ||| |||| Sbjct: 613 gaccctaagtaccacgaggagtgggtgagaaacaatgcgcgtgccaatgaaagaagccgg 672 Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320 ||||| || |||||| | |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 673 cgcaatgataggcctagaaactttgacaggtcaaggaattttgagaggagaagggagaac 732 Query: 321 a 321 | Sbjct: 733 a 733
>dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H21, full insert sequence Length = 1435 Score = 343 bits (173), Expect = 3e-91 Identities = 269/301 (89%) Strand = Plus / Plus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 404 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 463 Query: 81 ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140 |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| || Sbjct: 464 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcatatctg 523 Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200 ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| Sbjct: 524 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 583 Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260 ||||| || ||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 584 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 643 Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320 ||||| || |||||| | |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 644 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 703 Query: 321 a 321 | Sbjct: 704 a 704
>dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036D20, full insert sequence Length = 1435 Score = 335 bits (169), Expect = 8e-89 Identities = 268/301 (89%) Strand = Plus / Plus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 404 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 463 Query: 81 ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140 |||||||||||||||||||||||||| |||||||| ||||||||||| || || || || Sbjct: 464 ctctcctacaaactcaaagagttgcccaaggtccgctgggttcttccagactcgtatctg 523 Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200 ||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| Sbjct: 524 gatgtcagaaataaggactatggaggagagccttttataaatggagaagctgttccttat 583 Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260 ||||| || ||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 584 gaccctaagtaccatgaggagtgggtgagaaacaatgcacgtgccaatgaaaggacccga 643 Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320 ||||| || |||||| | |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 644 cgcaatgataggcctagaaactttgacaggtcaaggaatttcgagaggagaagggagaac 703 Query: 321 a 321 | Sbjct: 704 a 704
>gb|AY104285.1| Zea mays PCO088782 mRNA sequence Length = 1701 Score = 295 bits (149), Expect = 7e-77 Identities = 263/301 (87%) Strand = Plus / Plus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| |||||||| || ||| | ||||| |||| |||||||| || |||||||||||| Sbjct: 465 aagatatactctgtatcgactcgtcattactttggctttggtgctcttgtatctgaggaa 524 Query: 81 ctctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcatacctc 140 || || |||||||| ||||| | || |||||||| ||||||||||||||||||||| | Sbjct: 525 ctttcttacaaactgaaagaaattcccaaggtccgctgggttcttcctgattcatacttg 584 Query: 141 gatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttccttac 200 ||||||| ||| |||||||||||||| ||||| || ||| |||| |||||||||||||| Sbjct: 585 gatgtcaaaaacaaggactatggaggcgaacccttcataaatgggcaagctgttccttat 644 Query: 201 gaccccaaataccatgaggagtgggtgagaaacaatgcccgtgccaatgagagatcccgg 260 || || ||||| |||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 645 gatcctaaatatcatgaggagtgggtgagaaacaatgcccgtgccaatgacagaaaccgg 704 Query: 261 cgcaacgacaggcctcgcaactttgacaggtcgaggaactttgaaaggagaagggagaac 320 ||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 705 cgcaatgataggcctcgcaactttgacaggtcaaggaactttgacaggagaagggagaac 764 Query: 321 a 321 | Sbjct: 765 a 765
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 ||||||||| |||||| |||| |||| |||||||| ||||| || ||||| |||||||| Sbjct: 38399 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 38340 Query: 224 ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283 ||||||||||||||| ||||||||||| ||| ||||||||| || |||||| | ||||| Sbjct: 38339 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 38280 Query: 284 tgacaggtcgaggaactttgaaaggagaagggagaaca 321 ||||||||| ||||| ||||| |||||||||||||||| Sbjct: 38279 tgacaggtcaaggaattttgagaggagaagggagaaca 38242 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||||||||| ||||||||| ||||||| ||||||||||| || || |||||||||||| Sbjct: 39420 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 39361 Query: 81 ctctcctacaaactcaaag 99 ||||||||||||||||||| Sbjct: 39360 ctctcctacaaactcaaag 39342 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 39248 agagttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataagga 39189 Query: 158 ctatggagg 166 ||| ||||| Sbjct: 39188 ctacggagg 39180
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 ||||||||| |||||| |||| |||| |||||||| ||||| || ||||| |||||||| Sbjct: 19442992 aggagaaccttttataaatggggaagccgttccttatgaccctaagtaccacgaggagtg 19442933 Query: 224 ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283 ||||||||||||||| ||||||||||| ||| ||||||||| || |||||| | ||||| Sbjct: 19442932 ggtgagaaacaatgcgcgtgccaatgaaagaagccggcgcaatgataggcctagaaactt 19442873 Query: 284 tgacaggtcgaggaactttgaaaggagaagggagaaca 321 ||||||||| ||||| ||||| |||||||||||||||| Sbjct: 19442872 tgacaggtcaaggaattttgagaggagaagggagaaca 19442835 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 |||||| || |||||| ||||| ||||||||||||| ||||| || |||||||||||||| Sbjct: 2437444 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 2437385 Query: 224 ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283 ||||||||||||||| ||||||||||| || |||| ||||| || |||||| | ||||| Sbjct: 2437384 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 2437325 Query: 284 tgacaggtcgaggaactttgaaaggagaagggagaaca 321 ||||||||| ||||| || || |||||||||||||||| Sbjct: 2437324 tgacaggtcaaggaatttcgagaggagaagggagaaca 2437287 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||||||||| ||||||||| ||||||| ||||||||||| || || |||||||||||| Sbjct: 19444013 aagatctactcagtgtcaactcggcattactttgcttttggagctcttgtatctgaggaa 19443954 Query: 81 ctctcctacaaactcaaag 99 ||||||||||||||||||| Sbjct: 19443953 ctctcctacaaactcaaag 19443935 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 2438396 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 2438337 Query: 81 ctctcctacaaactcaaag 99 ||||||||||||||||||| Sbjct: 2438336 ctctcctacaaactcaaag 2438318 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||||| Sbjct: 19443841 agagttgcccaaggtccgctgggttcttccagactcatacctggatgtcagaaataagga 19443782 Query: 158 ctatggagg 166 ||| ||||| Sbjct: 19443781 ctacggagg 19443773 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||| |||||||| ||||||||||| || ||||| || ||||||||||||||||| Sbjct: 2438226 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 2438167 Query: 158 ctatggagg 166 ||||||||| Sbjct: 2438166 ctatggagg 2438158
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 |||||| || |||||| ||||| ||||||||||||| ||||| || |||||||||||||| Sbjct: 115854 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 115795 Query: 224 ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283 ||||||||||||||| ||||||||||| || |||| ||||| || |||||| | ||||| Sbjct: 115794 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 115735 Query: 284 tgacaggtcgaggaactttgaaaggagaagggagaaca 321 ||||||||| ||||| || || |||||||||||||||| Sbjct: 115734 tgacaggtcaaggaatttcgagaggagaagggagaaca 115697 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 116806 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 116747 Query: 81 ctctcctacaaactcaaag 99 ||||||||||||||||||| Sbjct: 116746 ctctcctacaaactcaaag 116728 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||| |||||||| ||||||||||| || ||||| || ||||||||||||||||| Sbjct: 116636 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 116577 Query: 158 ctatggagg 166 ||||||||| Sbjct: 116576 ctatggagg 116568
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 155 bits (78), Expect = 2e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 |||||| || |||||| ||||| ||||||||||||| ||||| || |||||||||||||| Sbjct: 24034 aggagagccttttataaatggagaagctgttccttatgaccctaagtaccatgaggagtg 23975 Query: 224 ggtgagaaacaatgcccgtgccaatgagagatcccggcgcaacgacaggcctcgcaactt 283 ||||||||||||||| ||||||||||| || |||| ||||| || |||||| | ||||| Sbjct: 23974 ggtgagaaacaatgcacgtgccaatgaaaggacccgacgcaatgataggcctagaaactt 23915 Query: 284 tgacaggtcgaggaactttgaaaggagaagggagaaca 321 ||||||||| ||||| || || |||||||||||||||| Sbjct: 23914 tgacaggtcaaggaatttcgagaggagaagggagaaca 23877 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 21 aagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctgaggaa 80 ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 24986 aagatatactcagtgtcaactcggcattactttgcttttggtgctcttgtatctgaggaa 24927 Query: 81 ctctcctacaaactcaaag 99 ||||||||||||||||||| Sbjct: 24926 ctctcctacaaactcaaag 24908 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||| |||||||| ||||||||||| || ||||| || ||||||||||||||||| Sbjct: 24816 agagttgcccaaggtccgctgggttcttccagactcatatctggatgtcagaaataagga 24757 Query: 158 ctatggagg 166 ||||||||| Sbjct: 24756 ctatggagg 24748
>ref|NM_104204.2| Arabidopsis thaliana unknown protein AT1G53260 mRNA, complete cds Length = 1408 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 94 tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153 ||||||||||||||||||| ||||||||||||||||| ||| | |||| | |||| Sbjct: 543 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 602 Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213 | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || | Sbjct: 603 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 662 Query: 214 atgaggagtgggtgagaaacaatgc 238 |||| || ||| | ||||||||||| Sbjct: 663 atgaagaatggataagaaacaatgc 687
>gb|AY735538.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260 mRNA, complete cds, alternatively spliced Length = 1335 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 94 tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153 ||||||||||||||||||| ||||||||||||||||| ||| | |||| | |||| Sbjct: 542 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 601 Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213 | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || | Sbjct: 602 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 661 Query: 214 atgaggagtgggtgagaaacaatgc 238 |||| || ||| | ||||||||||| Sbjct: 662 atgaagaatggataagaaacaatgc 686
>gb|AY735537.1| Arabidopsis thaliana chromosome 1 hypothetical protein AT1G53260 mRNA, complete cds, alternatively spliced Length = 1447 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 94 tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153 ||||||||||||||||||| ||||||||||||||||| ||| | |||| | |||| Sbjct: 543 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 602 Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213 | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || | Sbjct: 603 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 662 Query: 214 atgaggagtgggtgagaaacaatgc 238 |||| || ||| | ||||||||||| Sbjct: 663 atgaagaatggataagaaacaatgc 687
>gb|AY954765.1| Arabidopsis thaliana hypothetical protein (At1g53260) mRNA, complete cds Length = 816 Score = 89.7 bits (45), Expect = 8e-15 Identities = 120/145 (82%) Strand = Plus / Plus Query: 94 tcaaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaata 153 ||||||||||||||||||| ||||||||||||||||| ||| | |||| | |||| Sbjct: 77 tcaaagagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaata 136 Query: 154 aggactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaatacc 213 | ||||||||||||||||| || || |||||| | ||||||||||| ||||| || || | Sbjct: 137 aagactatggaggagaacctttcattgatggaaaggctgttccttatgacccaaagtatc 196 Query: 214 atgaggagtgggtgagaaacaatgc 238 |||| || ||| | ||||||||||| Sbjct: 197 atgaagaatggataagaaacaatgc 221
>ref|NM_112362.2| Arabidopsis thaliana unknown protein AT3G15000 mRNA, complete cds Length = 1556 Score = 69.9 bits (35), Expect = 7e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 16 ggatgaagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctg 75 |||||||||||||||| || ||||||||| || | ||||||||| || || || || | Sbjct: 461 ggatgaagatctactcggtttcaactaggtgctactatgcttttggggcacttgtgtcag 520 Query: 76 aggaactctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcat 135 | || || || |||| | ||||||||| | || || || |||||||||||||| || | Sbjct: 521 aagatctttctcacaagttaaaagagttgtcaaatgtgcgctgggttcttcctgactctt 580 Query: 136 acctcgatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttc 195 |||| ||||| || || || ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 581 acctggatgtgaggaacaaagactatggaggggaacctttcatcgatgggaaggctgttc 640 Query: 196 cttacgaccccaaataccatgaggagtgggtgagaaacaatgc 238 |||| || || || ||||| ||||||||| | || |||||||| Sbjct: 641 cttatgatcctaagtaccacgaggagtggataaggaacaatgc 683
>gb|AF428427.1|AF428427 Arabidopsis thaliana AT3g15000/K15M2_14 mRNA, complete cds Length = 1459 Score = 69.9 bits (35), Expect = 7e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 16 ggatgaagatctactctgtgtcaactaggcattattttgcttttggtgccctagtatctg 75 |||||||||||||||| || ||||||||| || | ||||||||| || || || || | Sbjct: 461 ggatgaagatctactcggtttcaactaggtgctactatgcttttggggcacttgtgtcag 520 Query: 76 aggaactctcctacaaactcaaagagttgcctaaggtccgttgggttcttcctgattcat 135 | || || || |||| | ||||||||| | || || || |||||||||||||| || | Sbjct: 521 aagatctttctcacaagttaaaagagttgtcaaatgtgcgctgggttcttcctgactctt 580 Query: 136 acctcgatgtcagaaataaggactatggaggagaaccatttatagatggacaagctgttc 195 |||| ||||| || || || ||||||||||| ||||| || || ||||| | ||||||| Sbjct: 581 acctggatgtgaggaacaaagactatggaggggaacctttcatcgatgggaaggctgttc 640 Query: 196 cttacgaccccaaataccatgaggagtgggtgagaaacaatgc 238 |||| || || || ||||| ||||||||| | || |||||||| Sbjct: 641 cttatgatcctaagtaccacgaggagtggataaggaacaatgc 683
>gb|BT015868.1| Arabidopsis thaliana At3g15000 mRNA, complete cds Length = 1188 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 117 tgggttcttcctgattcatacctcgatgtcagaaataaggactatggaggagaaccattt 176 |||||||||||||| || ||||| ||||| || || || ||||||||||| ||||| || Sbjct: 505 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggaggggaacctttc 564 Query: 177 atagatggacaagctgttccttacgaccccaaataccatgaggagtgggtgagaaacaat 236 || ||||| | ||||||||||| || || || ||||| ||||||||| | || |||||| Sbjct: 565 atcgatgggaaggctgttccttatgatcctaagtaccacgaggagtggataaggaacaat 624 Query: 237 gc 238 || Sbjct: 625 gc 626
>emb|BX823328.1|CNS0A5D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1445 Score = 54.0 bits (27), Expect = 4e-04 Identities = 115/143 (80%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 96 aaagagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataag 155 ||||||||| | || || || |||||||||||||| || ||||| ||||| || || || Sbjct: 517 aaagagttgtcaaatgtgcgctgggttcttcctgactcttacctggatgtgaggaacaaa 576 Query: 156 gactatggaggagaaccatttatagatggacaagctgttccttacgaccccaaataccat 215 ||||||||||| ||| | || || ||||| | ||||||||||| || || || ||||| Sbjct: 577 gactatggaggggaa-ctttcatcgatgggaaggctgttccttatgatcctaagtaccac 635 Query: 216 gaggagtgggtgagaaacaatgc 238 ||||||||| | || |||||||| Sbjct: 636 gaggagtggataaggaacaatgc 658
>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I, complete sequence Length = 130235 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Minus Query: 164 aggagaaccatttatagatggacaagctgttccttacgaccccaaataccatgaggagtg 223 ||||||||| || || |||||| | ||||||||||| ||||| || || ||||| || || Sbjct: 58967 aggagaacctttcattgatggaaaggctgttccttatgacccaaagtatcatgaagaatg 58908 Query: 224 ggtgagaaacaatgc 238 | | ||||||||||| Sbjct: 58907 gataagaaacaatgc 58893 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Minus Query: 98 agagttgcctaaggtccgttgggttcttcctgattcatacctcgatgtcagaaataagga 157 ||||||||||||||| ||||||||||||||||| ||| | |||| | ||||| || Sbjct: 59164 agagttgcctaaggttaagtgggttcttcctgattcctacttggatgggaagaataaaga 59105 Query: 158 ctatggagg 166 ||||||||| Sbjct: 59104 ctatggagg 59096
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2 Length = 79279 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Plus Query: 117 tgggttcttcctgattcatacctcgatgtcagaaataaggactatggagg 166 |||||||||||||| || ||||| ||||| || || || ||||||||||| Sbjct: 47112 tgggttcttcctgactcttacctggatgtgaggaacaaagactatggagg 47161 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 ggatgaagatctactctgtgtcaactagg 44 |||||||||||||||| || ||||||||| Sbjct: 46927 ggatgaagatctactcggtttcaactagg 46955
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gggcccgccaccgccttcggg 427 ||||||||||||||||||||| Sbjct: 328931 gggcccgccaccgccttcggg 328951
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 gggcctgctccaccagggcagagcc 363 ||||||||||||| ||||||||||| Sbjct: 156330 gggcctgctccacaagggcagagcc 156354
>emb|X82639.1|MRZP3 M.radiata mRNA for zona pellucida glycoprotein-3 Length = 1299 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 ggtcgaggaactttgaaaggagaag 313 ||||||||||||||||||| ||||| Sbjct: 777 ggtcgaggaactttgaaagcagaag 753
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 atgctgctcctccaaggcgt 398 |||||||||||||||||||| Sbjct: 2993521 atgctgctcctccaaggcgt 2993502
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gagaaccatttatagatgga 185 |||||||||||||||||||| Sbjct: 25855639 gagaaccatttatagatgga 25855620
>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete sequence Length = 44761 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gagaaccatttatagatgga 185 |||||||||||||||||||| Sbjct: 26582 gagaaccatttatagatgga 26563
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggcctgctccaccagggcag 359 |||||||||||||||||||| Sbjct: 195393 ggcctgctccaccagggcag 195412
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgggcctgctccaccagggc 357 |||||||||||||||||||| Sbjct: 689459 cgggcctgctccaccagggc 689440
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 gagaaccatttatagatgga 185 |||||||||||||||||||| Sbjct: 25946948 gagaaccatttatagatgga 25946929
>gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, complete sequence Length = 199878 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ctttgaaaggagaagggaga 318 |||||||||||||||||||| Sbjct: 123988 ctttgaaaggagaagggaga 124007
>gb|AC095350.8| Homo sapiens 12 BAC RP11-662M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129055 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ccatgaggagtgggtgagaa 231 |||||||||||||||||||| Sbjct: 19751 ccatgaggagtgggtgagaa 19732 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,172,262 Number of Sequences: 3902068 Number of extensions: 4172262 Number of successful extensions: 79666 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79437 Number of HSP's gapped (non-prelim): 219 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)