ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 218 3e-66
2RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 187 8e-57
3RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 161 2e-46
4RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 155 2e-45
5RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 140 2e-33
6RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 137 9e-33
7RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 137 9e-33
8RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 137 1e-32
9RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 134 8e-32
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 134 1e-31
11RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 130 1e-30
12RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 129 2e-30
13RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 128 5e-30
14RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 125 4e-29
15RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 121 9e-28
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 79 7e-15
17PCRB_SULAC (Q4JAS3) Protein pcrB homolog 31 1.2
18PTR2_CANAL (P46030) Peptide transporter PTR2 31 1.2
19YHY6_YEAST (P38873) Hypothetical 175.8 kDa Trp-Asp repeats-conta... 25 4.2
20RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107 29 4.5
21PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor t... 29 4.5
22DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH) 29 5.9
23TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1... 29 5.9
24PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-s... 28 7.7
25OR65B_DROME (P82983) Putative odorant receptor 65b 28 7.7

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  218 bits (556), Expect(2) = 3e-66
 Identities = 107/108 (99%), Positives = 107/108 (99%)
 Frame = +3

Query: 120 KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL 299
           KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL
Sbjct: 26  KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL 85

Query: 300 FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           FQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV
Sbjct: 86  FQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 133



 Score = 52.4 bits (124), Expect(2) = 3e-66
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 44  MAAAFSSTVGAPASTPTNFLGKKLKE 121
           MAAAFSSTVGAPASTPTNFLGKKLK+
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKK 26



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  187 bits (474), Expect(2) = 8e-57
 Identities = 94/110 (85%), Positives = 99/110 (90%), Gaps = 2/110 (1%)
 Frame = +3

Query: 120 KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVD 293
           KQVTSAVNYHGKSS  NRF VMA E +DE + TD  +WKGLAYDISDDQQDITRGKG VD
Sbjct: 26  KQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVD 84

Query: 294 SLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           SLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVV
Sbjct: 85  SLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVV 134



 Score = 52.4 bits (124), Expect(2) = 8e-57
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +2

Query: 44  MAAAFSSTVGAPASTPTNFLGKKLKE 121
           MAAAFSSTVGAPASTPTNFLGKKLK+
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKK 26



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  161 bits (407), Expect(2) = 2e-46
 Identities = 79/110 (71%), Positives = 92/110 (83%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVD 293
           QV++AV YHGKSS +N RF  MAA+ +DE + TD  +WKGLAYDISDDQQDITRGKG+VD
Sbjct: 30  QVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVD 89

Query: 294 SLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           +LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA  FMDKLVV
Sbjct: 90  NLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVV 139



 Score = 43.5 bits (101), Expect(2) = 2e-46
 Identities = 23/28 (82%), Positives = 25/28 (89%), Gaps = 2/28 (7%)
 Frame = +2

Query: 44  MAAAFSSTVGAPASTPT--NFLGKKLKE 121
           MAAAFSSTVGAPASTPT  +FLGKKL +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNK 28



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  155 bits (391), Expect(2) = 2e-45
 Identities = 78/104 (75%), Positives = 88/104 (84%), Gaps = 4/104 (3%)
 Frame = +3

Query: 144 YHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAP 311
           YHG +   +R   VMAA+  +D+ + TD  +WKGLAYDISDDQQDITRGKGIVDSLFQAP
Sbjct: 28  YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAP 87

Query: 312 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
            GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFMDKL+V
Sbjct: 88  MGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIV 131



 Score = 46.2 bits (108), Expect(2) = 2e-45
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 44  MAAAFSSTVGAPASTPTNFLGKKLK 118
           MA+AFSSTVGAPASTPT FLGKK+K
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVK 25



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  140 bits (352), Expect = 2e-33
 Identities = 68/108 (62%), Positives = 83/108 (76%)
 Frame = +3

Query: 120 KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL 299
           K+V +   +   + K+N    + A   D++ + D+W+GLAYD SDDQQDITRGKG+VDS+
Sbjct: 36  KKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSV 95

Query: 300 FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVV
Sbjct: 96  FQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVV 143



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  137 bits (346), Expect = 9e-33
 Identities = 68/98 (69%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 153 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 329
           K+S  N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH
Sbjct: 47  KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 330 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
            AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVV
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVV 143



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  137 bits (346), Expect = 9e-33
 Identities = 68/98 (69%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 153 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 329
           K+S  N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH
Sbjct: 47  KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 330 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
            AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVV
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVV 143



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  137 bits (345), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
 Frame = +3

Query: 138 VNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDISDDQQDITRGKGIVDSLFQAP 311
           VN    +SK +  ++    ++DE + TDK  WKGLA+D SDDQQDITRGKG VDSLFQAP
Sbjct: 40  VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 312 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
            G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMDKLVV
Sbjct: 100 QGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVV 143



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  134 bits (338), Expect = 8e-32
 Identities = 66/96 (68%), Positives = 77/96 (80%), Gaps = 4/96 (4%)
 Frame = +3

Query: 168 NRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 335
           N+   + AE ID    ++ ++D+WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH A
Sbjct: 52  NKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHA 111

Query: 336 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           VL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVV
Sbjct: 112 VLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVV 147



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  134 bits (336), Expect = 1e-31
 Identities = 68/96 (70%), Positives = 77/96 (80%), Gaps = 4/96 (4%)
 Frame = +3

Query: 168 NRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 335
           NR   +AAE  + D K+ T  D+WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH A
Sbjct: 52  NRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHA 111

Query: 336 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           VL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVV
Sbjct: 112 VLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVV 147



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  130 bits (328), Expect = 1e-30
 Identities = 59/90 (65%), Positives = 72/90 (80%)
 Frame = +3

Query: 174 FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 353
           F ++A ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE
Sbjct: 51  FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110

Query: 354 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           Y+S GLR Y +DN + GFYIAPAFMDKL V
Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  129 bits (325), Expect = 2e-30
 Identities = 66/96 (68%), Positives = 73/96 (76%)
 Frame = +3

Query: 156 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 335
           SS+    TV AAEN  E++NTDKW  LA D SDDQ DI RGKG+VDSLFQAP   GTH  
Sbjct: 48  SSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVP 105

Query: 336 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVV
Sbjct: 106 IQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVV 141



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  128 bits (322), Expect = 5e-30
 Identities = 65/110 (59%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = +3

Query: 120 KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVD 293
           K+V S+   + K +  +   V A + I+E + T  D+W+GLAYD+SDDQQDITRGKG+VD
Sbjct: 38  KKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVD 97

Query: 294 SLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           SLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPAF+DKLVV
Sbjct: 98  SLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVV 147



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  125 bits (315), Expect = 4e-29
 Identities = 60/93 (64%), Positives = 73/93 (78%)
 Frame = +3

Query: 165 ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 344
           +NR   + A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++
Sbjct: 51  SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109

Query: 345 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           SYEYVSQ L+ Y  DN + GFYIAPAFMDKLVV
Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVV 142



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  121 bits (303), Expect = 9e-28
 Identities = 64/93 (68%), Positives = 74/93 (79%), Gaps = 3/93 (3%)
 Frame = +3

Query: 174 FTVMAAEN-IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 344
           F ++AAE  I+E + T  D+WKGLAYDISDDQQDITRGKG+VD LFQAP   GTH AV+S
Sbjct: 55  FKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMS 114

Query: 345 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVV 443
           SYEY+S GLR+   DN   GFYIAPAF+DKLVV
Sbjct: 115 SYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVV 145



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
 Frame = +3

Query: 207 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 377
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 378 YDFDNTMGGFYIAPAFMDKLVV 443
             F+N   GFYI+PAF+DK+ +
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTI 116



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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 410 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 234
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234



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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -3

Query: 322 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 176
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546



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>YHY6_YEAST (P38873) Hypothetical 175.8 kDa Trp-Asp repeats-containing protein|
           in GND1-IKI1 intergenic region
          Length = 1541

 Score = 25.0 bits (53), Expect(2) = 4.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 165 PWSSCHGSSRPRSPASLSFFP 103
           PW +CH  S P  P S++  P
Sbjct: 384 PWYNCHPVSDPELPDSITTHP 404



 Score = 22.7 bits (47), Expect(2) = 4.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 244 SYARPFHLSVFLFSSMFSAAMTVNLLALELLPW 146
           S  RP    +F    M +A     LLA  ++PW
Sbjct: 353 SLPRPLFKKLFRHDLMIAALFRNFLLAKRIMPW 385



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>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +3

Query: 153 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 311
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S +  P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740



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>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 243 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 377
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239



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>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 421

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 RNTDKWKGLAYDISDDQQDITRGKGI 287
           R+  K KG A++ISDD + +   KGI
Sbjct: 46  RDVKKHKGYAFEISDDLESVIEDKGI 71



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>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -2

Query: 410 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 231
           +E   G  E + P+A  DVL+ AE G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 188 LEVDLGTFEELAPEAPEDVLLVAESGVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246



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>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
 Frame = -1

Query: 168  WPWSSCHGSSRPRSPASLSFFPRKLVGVEA---------GAPTVEE 58
            +P S    SS P S +  S FP + VGV A         GAP V E
Sbjct: 1886 FPGSGLEASSVPESSSETSDFPERAVGVSAAPEASGGASGAPDVSE 1931



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>OR65B_DROME (P82983) Putative odorant receptor 65b|
          Length = 385

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 325 VPSPVGAWKSESTMPFPLVMSCWSSEISYARPFHLSVFLFSSMFSAAMTVNLLALELLPW 146
           + SP+  W  +  +PF         E S     H  ++LF S F+      LL +E L  
Sbjct: 144 ITSPM--WVHQQNLPFHAAFPFQWHEKSLHPISHAIIYLFQSYFAVYCLTWLLCIEGLSI 201

Query: 145 *FTAEVTCFLELL 107
              AE+T  +E+L
Sbjct: 202 CIYAEITFGIEVL 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,170,109
Number of Sequences: 219361
Number of extensions: 1067749
Number of successful extensions: 3681
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3673
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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