| Clone Name | baal21l14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 6414 Score = 218 bits (110), Expect = 4e-54 Identities = 157/171 (91%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 2825 gctcaacggg-atcgcgctc-cgggtgcccaccccgaacgtctccgtcgtcgacctcgtc 2882 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2883 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcg 2942 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 ||||||||||||| |||||||||||| |||||||||| ||| ||||||||| Sbjct: 2943 gccaacgagctcacgggcatcctcgaggtctgcgacgtgccgctcgtgtcc 2993
>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA) glyceraldehyde-3-phosphate dehydrogenase Length = 1382 Score = 218 bits (110), Expect = 4e-54 Identities = 157/171 (91%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 822 gctcaacggg-atcgcgctc-cgggtgcccaccccgaacgtctccgtcgtcgacctcgtc 879 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcg 939 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 ||||||||||||| |||||||||||| |||||||||| ||| ||||||||| Sbjct: 940 gccaacgagctcacgggcatcctcgaggtctgcgacgtgccgctcgtgtcc 990
>gb|AY103602.1| Zea mays PCO093211 mRNA sequence Length = 1490 Score = 218 bits (110), Expect = 4e-54 Identities = 157/171 (91%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 912 gctcaacggg-atcgcgctc-cgggtgcccaccccgaacgtctccgtcgtcgacctcgtc 969 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcg 1029 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 ||||||||||||| |||||||||||| |||||||||| ||| ||||||||| Sbjct: 1030 gccaacgagctcacgggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1080
>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene, complete cds, clone lambda-gapA1 Length = 6414 Score = 218 bits (110), Expect = 4e-54 Identities = 157/171 (91%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||||||||| ||||| || |||||||||||| Sbjct: 2825 gctcaacggg-atcgcgctc-cgggtgcccaccccgaacgtctccgtcgtcgacctcgtc 2882 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2883 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcg 2942 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 ||||||||||||| |||||||||||| |||||||||| ||| ||||||||| Sbjct: 2943 gccaacgagctcacgggcatcctcgaggtctgcgacgtgccgctcgtgtcc 2993
>gb|M31483.1|MZENAR2 Maize glyceraldehyde-3-phosphate dehydrogenase, 3' end Length = 456 Score = 216 bits (109), Expect = 2e-53 Identities = 139/150 (92%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagacc 81 |||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||| Sbjct: 1 cgggtgcccaccccgaacgtctccgtcgtcgacctcgtcgtgcaggtctccaagaagacc 60 Query: 82 ctcgccgaggaggtgaaccaggcgttccgcgacgccgccgccaacgagctcaagggcatc 141 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 61 ctcgccgaggaggtgaaccaggcgttccgcgacgccgcggccaacgagctcacgggcatc 120 Query: 142 ctcgacgtctgcgacgagcccctcgtgtcc 171 ||||| |||||||||| ||| ||||||||| Sbjct: 121 ctcgaggtctgcgacgtgccgctcgtgtcc 150
>ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 879 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 936 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 937 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 996 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 997 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1047
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 121799 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 121856 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 121857 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 121916 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 121917 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 121967
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 7480 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 7537 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 7538 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 7597 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 7598 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 7648
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 22913024 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 22913081 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22913082 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 22913141 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 22913142 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 22913192
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full insert sequence Length = 1468 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 915 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 972 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 973 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1032 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1033 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1083
>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full insert sequence Length = 1366 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 915 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 972 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 973 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1032 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1033 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1083
>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full insert sequence Length = 1538 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 920 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 977 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 978 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1037 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1038 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1088
>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full insert sequence Length = 1566 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 920 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 977 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 978 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1037 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1038 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1088
>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full insert sequence Length = 1473 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 920 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 977 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 978 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1037 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1038 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1088
>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full insert sequence Length = 1571 Score = 202 bits (102), Expect = 2e-49 Identities = 155/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 916 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 973 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 974 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1033 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 1034 gccaacgagctcaagggcatcctcgaggtctgcgacgtgccgctcgtgtcc 1084
>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full insert sequence Length = 1540 Score = 194 bits (98), Expect = 6e-47 Identities = 154/171 (90%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 920 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 977 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 978 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1037 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||||||| ||| |||||| ||| ||||||||| Sbjct: 1038 gccaacgagctcaagggcatcctcgaggtccgcgacgtgccgctcgtgtcc 1088
>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 5922 Score = 192 bits (97), Expect = 2e-46 Identities = 136/150 (90%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagacc 81 |||||||||||||| ||||| || |||||||||||| ||||||||||||| |||||| Sbjct: 2819 cgggtgcccaccccgaacgtctccgtcgtcgacctcgtcgtgcaggtctccaggaagacg 2878 Query: 82 ctcgccgaggaggtgaaccaggcgttccgcgacgccgccgccaacgagctcaagggcatc 141 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 2879 ctcgccgaggaggtgaaccaggcgttccgcgacgccgcggccaacgagctgcagggcatc 2938 Query: 142 ctcgacgtctgcgacgagcccctcgtgtcc 171 ||||| |||||||||| ||| ||||||||| Sbjct: 2939 ctcgaggtctgcgacgtgccgctcgtgtcc 2968
>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit (GAPDH) mRNA, partial cds Length = 1073 Score = 161 bits (81), Expect = 8e-37 Identities = 132/146 (90%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 923 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 980 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 981 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 1040 Query: 121 gccaacgagctcaagggcatcctcga 146 |||||||||||||| ||||||||||| Sbjct: 1041 gccaacgagctcaa-ggcatcctcga 1065
>gb|AF010582.1|AF010582 Oryza sativa glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA, partial cds Length = 804 Score = 159 bits (80), Expect = 3e-36 Identities = 131/145 (90%), Gaps = 3/145 (2%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| |||||||| || || |||||| || |||||||||||| Sbjct: 660 gctcaacggg-atcgcgctc-cgggtgccgacgccgaacgtgtccgtggtcgacctcgtg 717 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 718 gtgcaggtgtccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacagcgcc 777 Query: 121 gccaacgagctcaagggcatcctcg 145 |||||||||||||| |||||||||| Sbjct: 778 gccaacgagctcaa-ggcatcctcg 801
>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 8839 Score = 155 bits (78), Expect = 5e-35 Identities = 149/171 (87%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 1 gctcaacgggnatcgcgctttcgggtgcccacccccaacgtgnncgncgtcgacctcgtg 60 |||||||||| |||||||| | ||||||||||||| ||||| || | ||||||| || Sbjct: 5996 gctcaacggg-atcgcgctgt-gggtgcccaccccgaacgtctccgtcctcgaccttgtc 6053 Query: 61 gtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 6054 gtgcaggtctccaggaagacgctcgccgaggaggtgaaccaggcgttccgcgacaccgcg 6113 Query: 121 gccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 || |||||||| ||||||||||||| |||||||| | ||| ||||||||| Sbjct: 6114 gctaacgagctgcagggcatcctcgaggtctgcgatgtgccgctcgtgtcc 6164
>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full insert sequence Length = 778 Score = 101 bits (51), Expect = 7e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 101 aggcgttccgcgacgccgccgccaacgagctcaagggcatcctcgacgtctgcgacgagc 160 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || Sbjct: 233 aggcgttccgcgacagcgccgccaacgagctcaagggcatcctcgaggtctgcgacgtgc 292 Query: 161 ccctcgtgtcc 171 | ||||||||| Sbjct: 293 cgctcgtgtcc 303
>gb|DQ301767.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1330 Score = 65.9 bits (33), Expect = 4e-08 Identities = 81/98 (82%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 |||||||||||||||||| | || || || |||||||||||| ||||||||| || Sbjct: 826 gtgcccacccccaacgtgtccattgtggatctggtggtgcaggtcgagaagaagaccttc 885 Query: 85 gccgaggaggtgaaccaggcgttccgcgacgccgccgc 122 || |||||||||||| | || |||||||| |||||||| Sbjct: 886 gctgaggaggtgaacaacgccttccgcgaggccgccgc 923
>gb|DQ301766.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1478 Score = 65.9 bits (33), Expect = 4e-08 Identities = 81/98 (82%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 |||||||||||||||||| | || || || |||||||||||| ||||||||| || Sbjct: 832 gtgcccacccccaacgtgtccattgtggatctggtggtgcaggtcgagaagaagaccttc 891 Query: 85 gccgaggaggtgaaccaggcgttccgcgacgccgccgc 122 || |||||||||||| | || |||||||| |||||||| Sbjct: 892 gctgaggaggtgaacaacgccttccgcgaggccgccgc 929
>gb|DQ270261.1| Cladophora rupestris glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1443 Score = 63.9 bits (32), Expect = 1e-07 Identities = 68/81 (83%) Strand = Plus / Plus Query: 28 cccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctcgcc 87 ||||||||||||||| || ||| ||||| || |||||||| |||||||| || || Sbjct: 826 cccacccccaacgtgtccgtcgttgaccttgtcgtgcaggtagagaagaagacacttgct 885 Query: 88 gaggaggtgaaccaggcgttc 108 ||||||||||||||||||||| Sbjct: 886 gaggaggtgaaccaggcgttc 906
>gb|DQ270263.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1239 Score = 58.0 bits (29), Expect = 9e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 130 ctcaagggcatcctcgacgtctgcgacgagcccctcgtgtc 170 |||||||||||||||| ||| |||||||||||||| ||||| Sbjct: 805 ctcaagggcatcctcgccgtgtgcgacgagcccctggtgtc 845
>gb|DQ270259.1| Scherffelia dubia glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1210 Score = 56.0 bits (28), Expect = 4e-05 Identities = 73/89 (82%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 |||||||| ||||||||| || || ||||| ||||| ||||| ||||||||| | Sbjct: 878 gtgcccacgcccaacgtgtccgtggtggaccttgtggtacaggtggagaagaagaccttt 937 Query: 85 gccgaggaggtgaaccaggcgttccgcga 113 || |||||||| ||||||||||||||||| Sbjct: 938 gcggaggaggtcaaccaggcgttccgcga 966
>emb|AJ246029.2|KFL246029 Klebsormidium flaccidum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 949 Score = 54.0 bits (27), Expect = 1e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 73 aagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgccgccaacgagctc 132 ||||||||| |||| |||||||||||| | || ||||| || || ||| ||||||||| Sbjct: 747 aagaagaccttcgctgaggaggtgaacaatgctttccgggaggctgccaataacgagctc 806 Query: 133 aagggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 ||||| || | |||||| |||||||||||| |||||| Sbjct: 807 aagggaattttggacgtcaacgacgagccccttgtgtcc 845
>dbj|AB035312.1| Chlamydomonas sp. W80 gap-1 mRNA for NADP-glyceraldehyde-3-phosphate dehydrogenase, complete cds Length = 1311 Score = 54.0 bits (27), Expect = 1e-04 Identities = 78/96 (81%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 |||||||||||||||||| | ||| ||||| ||||||||||| ||||||||| | Sbjct: 839 gtgcccacccccaacgtgtccatcgtggacctggtggtgcaggtggagaagaagaccttt 898 Query: 85 gccgaggaggtgaaccaggcgttccgcgacgccgcc 120 || |||||||| ||| ||||||||||| |||||| Sbjct: 899 gcggaggaggtcaacgccgcgttccgcgaggccgcc 934
>gb|DQ122894.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) mRNA, partial cds; nuclear gene for chloroplast product Length = 1708 Score = 52.0 bits (26), Expect = 6e-04 Identities = 62/75 (82%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 ||||||||||||| |||| | ||||||||| || || ||||| ||||||||| || Sbjct: 799 gtgcccacccccaccgtgtcggtcgtcgacctggtcgtccaggttgagaagaagaccttc 858 Query: 85 gccgaggaggtgaac 99 ||||||||||||||| Sbjct: 859 gccgaggaggtgaac 873
>ref|XM_493811.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 1051 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 1086
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 1644507 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 1644542
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 51953 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 51988
>gb|DQ270258.1| Cyanophora paradoxa glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1442 Score = 48.1 bits (24), Expect = 0.009 Identities = 93/116 (80%) Strand = Plus / Plus Query: 52 gacctcgtggtgcaggtctccaagaagaccctcgccgaggaggtgaaccaggcgttccgc 111 |||||||| || |||||| ||||||||| ||||||| ||||| ||| || ||||| Sbjct: 964 gacctcgtcgtccaggtcgagaagaagaccttcgccgatgaggtcaacgctgccctccgc 1023 Query: 112 gacgccgccgccaacgagctcaagggcatcctcgacgtctgcgacgagcccctcgt 167 || || ||| || ||| ||||||||| |||||| ||||| |||||||||||||| Sbjct: 1024 gaggcggccaacaccgacctcaagggcgtcctcgtcgtctcggacgagcccctcgt 1079
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 124068 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 124103
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 1644505 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 1644540
>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full insert sequence Length = 1668 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 1106 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 1141
>dbj|AK059014.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A08, full insert sequence Length = 892 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 376 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 411
>gb|L27668.1|CRECPGAPA Chlamydomonas reinhardtii chloroplast glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, complete cds Length = 2219 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Plus Query: 73 aagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgcc 120 ||||||||| ||||||||||||||||| || |||||||| |||||| Sbjct: 1893 aagaagaccttcgccgaggaggtgaacgccgccttccgcgaggccgcc 1940
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 48.1 bits (24), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 136 ggcatcctcgacgtctgcgacgagcccctcgtgtcc 171 |||||||||||||||||||||| ||| || |||||| Sbjct: 56970 ggcatcctcgacgtctgcgacgtgccgctggtgtcc 57005
>gb|DQ122925.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) gene, partial cds; nuclear gene for chloroplast product Length = 1772 Score = 46.1 bits (23), Expect = 0.034 Identities = 26/27 (96%) Strand = Plus / Plus Query: 73 aagaagaccctcgccgaggaggtgaac 99 ||||||||| ||||||||||||||||| Sbjct: 1569 aagaagaccttcgccgaggaggtgaac 1595
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ggcgttccgcgacgccgccgcc 123 |||||||||||||||||||||| Sbjct: 11037 ggcgttccgcgacgccgccgcc 11058
>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007H22, complete sequence Length = 160938 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 ggcgttccgcgacgccgccgcc 123 |||||||||||||||||||||| Sbjct: 1072 ggcgttccgcgacgccgccgcc 1051
>gb|DQ270260.1| Spermatozopsis similis glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 795 Score = 44.1 bits (22), Expect = 0.14 Identities = 79/98 (80%) Strand = Plus / Plus Query: 73 aagaagaccctcgccgaggaggtgaaccaggcgttccgcgacgccgccgccaacgagctc 132 ||||||||| |||| |||||||||||| | || |||||||| || || ||| |||| | Sbjct: 533 aagaagaccttcgcggaggaggtgaacaacgccttccgcgaggcggcggccggcgagatg 592 Query: 133 aagggcatcctcgacgtctgcgacgagcccctcgtgtc 170 |||||| |||| | || ||||||||||| || ||||| Sbjct: 593 aagggcgtcctggcggtgtgcgacgagccgctggtgtc 630
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ggcgttccgcgacgccgccgcc 123 |||||||||||||||||||||| Sbjct: 6885779 ggcgttccgcgacgccgccgcc 6885800
>emb|AJ332921.1|HSA332921 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KF15C Length = 609 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 gtggtgcaggtctccaagaaga 79 |||||||||||||||||||||| Sbjct: 211 gtggtgcaggtctccaagaaga 232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ggcgttccgcgacgccgccgcc 123 |||||||||||||||||||||| Sbjct: 6952246 ggcgttccgcgacgccgccgcc 6952267
>ref|XM_306668.2| Anopheles gambiae str. PEST ENSANGP00000000051 (ENSANGG00000000051), partial mRNA Length = 1035 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgtg 42 ||||||||||||||||||||| Sbjct: 727 cgggtgcccacccccaacgtg 747
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gctcaagggcatcctcgacg 148 |||||||||||||||||||| Sbjct: 56046 gctcaagggcatcctcgacg 56027
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 atcctcgacgtctgcgacga 158 |||||||||||||||||||| Sbjct: 63961 atcctcgacgtctgcgacga 63980
>emb|AJ246027.2|MPO246027 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate dehydrogenase, subunit GapB Length = 1770 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 gctcaagggcatcctcgacgtctgcgac 156 ||||||||||||||||| ||| |||||| Sbjct: 1144 gctcaagggcatcctcgccgtgtgcgac 1171
>emb|AJ007274.1|GVI7274 Gloeobacter violaceus gap2 gene, partial Length = 907 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgt 41 |||||||||||||||||||| Sbjct: 671 cgggtgcccacccccaacgt 690
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcaagggcatcctcgacgtc 150 |||||||||||||||||||| Sbjct: 1257351 tcaagggcatcctcgacgtc 1257332 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 gagctcaagggcatcctcg 145 ||||||||||||||||||| Sbjct: 3885023 gagctcaagggcatcctcg 3885041
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 agctcaagggcatcctcgac 147 |||||||||||||||||||| Sbjct: 2000882 agctcaagggcatcctcgac 2000901
>ref|XM_501515.1| Yarrowia lipolytica CLIB122, YALI0C06369g predicted mRNA Length = 1017 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgagctcaagggcatcctcg 145 |||||||||||||||||||| Sbjct: 804 cgagctcaagggcatcctcg 823
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcaagggcatcctcgacgtc 150 |||||||||||||||||||| Sbjct: 4356657 tcaagggcatcctcgacgtc 4356676
>emb|X86376.1|S6803GAP2 Synechocystis 6803 gap2 gene Length = 1496 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgt 41 |||||||||||||||||||| Sbjct: 940 cgggtgcccacccccaacgt 959
>emb|X83564.1|SDNAGAP2 Synechocystis sp. (strain PCC 6803) gap2 gene Length = 1874 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgt 41 |||||||||||||||||||| Sbjct: 1157 cgggtgcccacccccaacgt 1176
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 caggcgttccgcgacgccgc 119 |||||||||||||||||||| Sbjct: 648682 caggcgttccgcgacgccgc 648701
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcaagggcatcctcgacgtc 150 |||||||||||||||||||| Sbjct: 333814 tcaagggcatcctcgacgtc 333833
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tgaaccaggcgttccgcgac 114 |||||||||||||||||||| Sbjct: 19025 tgaaccaggcgttccgcgac 19044
>gb|DQ270266.1| Physcomitrella patens glyceraldehyde-3-phosphate dehydrogenase subunit A1 (gapA1) mRNA, partial cds Length = 1444 Score = 40.1 bits (20), Expect = 2.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 aagaagaccctcgccgaggaggtgaaccaggc 104 ||||||||| | ||||||||||| |||||||| Sbjct: 874 aagaagacctttgccgaggaggtaaaccaggc 905
>gb|AC175202.2| Sporobolomyces roseus clone JGIBAIF-37E14, complete sequence Length = 41826 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 aacgagctcaagggcatcctcgac 147 |||||||||||||| ||||||||| Sbjct: 11121 aacgagctcaagggtatcctcgac 11098
>emb|AJ748745.1| Haloferax volcanii lhr gene for putative helicase Lhr Length = 4004 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tcgacctcgtggtgcaggtc 69 |||||||||||||||||||| Sbjct: 1852 tcgacctcgtggtgcaggtc 1871
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cctcgacgtctgcgacgagc 160 |||||||||||||||||||| Sbjct: 2344530 cctcgacgtctgcgacgagc 2344549 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcaagggcatcctcgacgtc 150 |||||||||||||||||||| Sbjct: 1487314 tcaagggcatcctcgacgtc 1487295 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 gagctcaagggcatcctcg 145 ||||||||||||||||||| Sbjct: 5058936 gagctcaagggcatcctcg 5058954
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgccgccgccaacgagctca 133 |||||||||||||||||||| Sbjct: 7029606 cgccgccgccaacgagctca 7029625
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 atcctcgacgtctgcgacga 158 |||||||||||||||||||| Sbjct: 3641614 atcctcgacgtctgcgacga 3641633
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgggtgcccacccccaacgt 41 |||||||||||||||||||| Sbjct: 3278433 cgggtgcccacccccaacgt 3278414
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgt 41 |||||||||||||||||||| Sbjct: 568456 cgggtgcccacccccaacgt 568475
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgccgccgccaacgagctca 133 |||||||||||||||||||| Sbjct: 50393 cgccgccgccaacgagctca 50412
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgccgccgccaacgagctca 133 |||||||||||||||||||| Sbjct: 89033 cgccgccgccaacgagctca 89052
>gb|AE004995.1| Halobacterium sp. NRC-1 section 26 of 170 of the complete genome Length = 11242 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggcgttccgcgacgccgccg 121 |||||||||||||||||||| Sbjct: 9555 ggcgttccgcgacgccgccg 9574
>dbj|AK109016.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A07, full insert sequence Length = 1712 Score = 40.1 bits (20), Expect = 2.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 52 gacctcgtggtgcaggtctccaagaagaccctcgccgaggaggtgaac 99 ||||| || ||||||||| ||||||||| |||| |||||||||||| Sbjct: 898 gacctggtcgtgcaggtcgagaagaagaccttcgctgaggaggtgaac 945
>gb|AF126158.1|AF126158 Cryptococcus curvatus glyceraldehyde 3-phosphate dehydrogenase (gpd) gene, complete cds Length = 1803 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgagctcaagggcatcctcg 145 |||||||||||||||||||| Sbjct: 1410 cgagctcaagggcatcctcg 1429
>gb|AF007101.1|AF007101 Streptomyces hygroscopicus putative pteridine-dependent dioxygenase, PKS modules 1,2,3 and 4, and putative regulatory protein genes, complete cds and putative hydroxylase gene, partial cds Length = 32870 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ccctcgccgaggaggtgaac 99 |||||||||||||||||||| Sbjct: 24412 ccctcgccgaggaggtgaac 24431
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cgagctcaagggcatcctcg 145 |||||||||||||||||||| Sbjct: 827716 cgagctcaagggcatcctcg 827735
>ref|XM_480249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 ccgcgacgccgccgccaac 126 ||||||||||||||||||| Sbjct: 327 ccgcgacgccgccgccaac 345
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 ttccgcgacgccgccgcca 124 ||||||||||||||||||| Sbjct: 969435 ttccgcgacgccgccgcca 969417
>ref|XM_361360.1| Magnaporthe grisea 70-15 hypothetical protein (MG03834.4) partial mRNA Length = 1593 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 117 cgccgccaacgagctcaagggcatcct 143 |||| ||||||||||||||| |||||| Sbjct: 1410 cgccaccaacgagctcaaggtcatcct 1436
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland Research Institute) complete sequence Length = 227741 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tcgggtgcccacccccaac 39 ||||||||||||||||||| Sbjct: 196718 tcgggtgcccacccccaac 196736
>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence Length = 231245 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tcgggtgcccacccccaac 39 ||||||||||||||||||| Sbjct: 85061 tcgggtgcccacccccaac 85079
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 caggcgttccgcgacgccg 118 ||||||||||||||||||| Sbjct: 23232 caggcgttccgcgacgccg 23214
>gb|DQ270268.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds Length = 1444 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/32 (87%) Strand = Plus / Plus Query: 28 cccacccccaacgtgnncgncgtcgacctcgt 59 |||||||||||||| || |||||||||||| Sbjct: 987 cccacccccaacgtttccgtcgtcgacctcgt 1018
>gb|DQ270257.1| Chlorella sp. JP-2005 glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1414 Score = 38.2 bits (19), Expect = 8.3 Identities = 76/96 (79%) Strand = Plus / Plus Query: 25 gtgcccacccccaacgtgnncgncgtcgacctcgtggtgcaggtctccaagaagaccctc 84 ||||||||||||| |||| | || ||||| ||||||||||| ||||||||| || Sbjct: 643 gtgcccacccccaccgtgtctgtggtggacctggtggtgcaggtggagaagaagaccttc 702 Query: 85 gccgaggaggtgaaccaggcgttccgcgacgccgcc 120 || |||||||| || |||| ||||| || |||||| Sbjct: 703 gctgaggaggtcaatgaggctttccgtgaggccgcc 738
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 38.2 bits (19), Expect = 8.3 Identities = 34/40 (85%) Strand = Plus / Plus Query: 22 cgggtgcccacccccaacgtgnncgncgtcgacctcgtgg 61 ||||||||||||||||| || || ||||||||| |||| Sbjct: 270955 cgggtgcccacccccaatgtctccgtcgtcgacctggtgg 270994
>dbj|AK044505.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930017K11 product:unclassifiable, full insert sequence Length = 2537 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tcgggtgcccacccccaac 39 ||||||||||||||||||| Sbjct: 870 tcgggtgcccacccccaac 888
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tcgggtgcccacccccaac 39 ||||||||||||||||||| Sbjct: 162986 tcgggtgcccacccccaac 162968
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 ccgcgacgccgccgccaac 126 ||||||||||||||||||| Sbjct: 3842469 ccgcgacgccgccgccaac 3842487
>ref|XM_220257.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA A030007D23 gene (LOC302999), mRNA Length = 2679 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tcgggtgcccacccccaac 39 ||||||||||||||||||| Sbjct: 255 tcgggtgcccacccccaac 273
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 91 gaggtgaaccaggcgttcc 109 ||||||||||||||||||| Sbjct: 4045158 gaggtgaaccaggcgttcc 4045176 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 cgacgccgccgccaacgag 129 ||||||||||||||||||| Sbjct: 3398369 cgacgccgccgccaacgag 3398387
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 108 ccgcgacgccgccgccaac 126 ||||||||||||||||||| Sbjct: 107686 ccgcgacgccgccgccaac 107704
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 123 caacgagctcaagggcatc 141 ||||||||||||||||||| Sbjct: 5611493 caacgagctcaagggcatc 5611475
>gb|AE005031.1| Halobacterium sp. NRC-1 section 62 of 170 of the complete genome Length = 11994 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 aggcgttccgcgacgccgc 119 ||||||||||||||||||| Sbjct: 3344 aggcgttccgcgacgccgc 3326
>dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:F13F19 Length = 97397 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ttcgggtgcccacccccaa 38 ||||||||||||||||||| Sbjct: 73446 ttcgggtgcccacccccaa 73428
>ref|XM_307780.2| Anopheles gambiae str. PEST ENSANGP00000012927 (ENSANGG00000010438), partial mRNA Length = 14007 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 cgccgaggaggtgaaccag 102 ||||||||||||||||||| Sbjct: 11403 cgccgaggaggtgaaccag 11421
>gb|AF065159.3|AF065159 Bradyrhizobium japonicum putative arylsulfatase (arsA), putative soluble lytic transglycosylase precursor (sltA), dihydrodipicolinate synthase (dapA), MscL (mscL), SmpB (smpB), BcpB (bcpB), RnpO (rnpO), RelA/SpoT homolog (relA), PdxJ (pdxJ), and acyl carrier protein synthase AcpS (acpS) genes, complete cds; prokaryotic type I signal peptidase SipF (sipF) gene, sipF-sipS allele, complete cds; RNase III (rnc), GTP-binding protein Era (era), hypothetical protein, recO-like protein, topoisomerase II (gyrA), putative ABC transporter, putative GMC-oxidoreductase, hypothetical protein, putative cytochrome C binding protein (cyc4), putative polytopic integral membrane protein, superoxide dismutase SodM-like protein, putative inner membrane protein, AttM-like protein (attM), adenylate cyclases-like protein, and putative inner membrane protein (spcT) genes, complete cds; and unknown genes Length = 35209 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 123 caacgagctcaagggcatc 141 ||||||||||||||||||| Sbjct: 18884 caacgagctcaagggcatc 18902
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 cgaggaggtgaaccaggcg 105 ||||||||||||||||||| Sbjct: 1853595 cgaggaggtgaaccaggcg 1853613 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 918,855 Number of Sequences: 3902068 Number of extensions: 918855 Number of successful extensions: 77001 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 74711 Number of HSP's gapped (non-prelim): 2285 length of query: 171 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 149 effective length of database: 17,147,199,772 effective search space: 2554932766028 effective search space used: 2554932766028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)