ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21k13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
2dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
3ref|NM_193993.1| Oryza sativa (japonica cultivar-group), predic... 182 8e-43
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
5dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
6gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, p... 42 1.9
7gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, parti... 42 1.9
8gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, ... 42 1.9
9gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, parti... 42 1.9
10gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, ... 42 1.9
11gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, parti... 42 1.9
12emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on ch... 42 1.9
13ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predi... 42 1.9
14emb|AL596169.1| Listeria innocua Clip11262 complete genome, segm... 42 1.9
15gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 42 1.9
16gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D14... 42 1.9
17gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymera... 42 1.9
18gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 42 1.9
19emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 42 1.9
20gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.7
21emb|Z82072.1|CEW05H12 Caenorhabditis elegans Cosmid W05H12, comp... 40 7.7
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.7
24dbj|AK111522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
26emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 40 7.7
27emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.7 
>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
           insert sequence
          Length = 1683

 Score =  389 bits (196), Expect = e-105
 Identities = 334/380 (87%)
 Strand = Plus / Plus

                                                                       
Query: 185 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 244
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 207 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 266

                                                                       
Query: 245 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 304
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 267 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 326

                                                                       
Query: 305 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 364
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 327 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 386

                                                                       
Query: 365 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 424
           ||||||||||||||||  |||||||||||||| ||||||||||||||||| || | ||||
Sbjct: 387 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 446

                                                                       
Query: 425 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 484
            |||||||||| |||||||| ||||| ||  ||||||||||||| ||| |||| || |||
Sbjct: 447 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 506

                                                                       
Query: 485 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 544
           ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 507 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 566

                               
Query: 545 ggttctggattccgaagaga 564
           |||||||| |||||||||||
Sbjct: 567 ggttctgggttccgaagaga 586
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>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
           insert sequence
          Length = 1542

 Score =  389 bits (196), Expect = e-105
 Identities = 334/380 (87%)
 Strand = Plus / Plus

                                                                       
Query: 185 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 244
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 209 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 268

                                                                       
Query: 245 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 304
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 269 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 328

                                                                       
Query: 305 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 364
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 329 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 388

                                                                       
Query: 365 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 424
           ||||||||||||||||  |||||||||||||| ||||||||||||||||| || | ||||
Sbjct: 389 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 448

                                                                       
Query: 425 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 484
            |||||||||| |||||||| ||||| ||  ||||||||||||| ||| |||| || |||
Sbjct: 449 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 508

                                                                       
Query: 485 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 544
           ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 509 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 568

                               
Query: 545 ggttctggattccgaagaga 564
           |||||||| |||||||||||
Sbjct: 569 ggttctgggttccgaagaga 588
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>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  182 bits (92), Expect = 8e-43
 Identities = 170/196 (86%)
 Strand = Plus / Plus

                                                                       
Query: 185 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 244
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 184 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 243

                                                                       
Query: 245 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 304
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 244 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 303

                                                                       
Query: 305 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 364
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 304 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 363

                           
Query: 365 gcatgctgccatgcat 380
           ||||||||||||||||
Sbjct: 364 gcatgctgccatgcat 379



 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                       
Query: 480 cattcagggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaag 539
           |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 377 catttagggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaag 436

                                    
Query: 540 atattggttctggattccgaagaga 564
           ||||||||||||| |||||||||||
Sbjct: 437 atattggttctgggttccgaagaga 461
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 7e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 382      cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 441
                ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 14493898 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 14493839

                                                                            
Query: 442      caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 501
                ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 14493838 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 14493779

                                    
Query: 502      taaggaacttcaagaggagg 521
                 |||||||||||||| ||||
Sbjct: 14493778 caaggaacttcaagaagagg 14493759



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 280      ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 339
                ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 14494086 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 14494027

                                                         
Query: 340      agcccaagcagcgttctataacaaggcatgctgccatgcat 380
                ||||||||||||  | || || || ||||||||||||||||
Sbjct: 14494026 agcccaagcagcactatacaataaagcatgctgccatgcat 14493986



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 185      ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 244
                ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 14495804 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 14495745

                                                        
Query: 245      gtcaacctcggcctcgagttcttctccaagggcagggtga 284
                |||||||| || |||||| |||||||||||||||||||||
Sbjct: 14495744 gtcaacctgggactcgagctcttctccaagggcagggtga 14495705



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                              
Query: 519      aggcattgcgtggtggagaagatattggttctggattccgaagaga 564
                |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 14493237 aggcattgcgtggtggagaagatattggttctgggttccgaagaga 14493192
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  143 bits (72), Expect = 7e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 382   cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 441
             ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 53211 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 53152

                                                                         
Query: 442   caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 501
             ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 53151 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 53092

                                 
Query: 502   taaggaacttcaagaggagg 521
              |||||||||||||| ||||
Sbjct: 53091 caaggaacttcaagaagagg 53072



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 280   ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 339
             ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 53399 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 53340

                                                      
Query: 340   agcccaagcagcgttctataacaaggcatgctgccatgcat 380
             ||||||||||||  | || || || ||||||||||||||||
Sbjct: 53339 agcccaagcagcactatacaataaagcatgctgccatgcat 53299



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 185   ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 244
             ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 55117 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 55058

                                                     
Query: 245   gtcaacctcggcctcgagttcttctccaagggcagggtga 284
             |||||||| || |||||| |||||||||||||||||||||
Sbjct: 55057 gtcaacctgggactcgagctcttctccaagggcagggtga 55018



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 45/46 (97%)
 Strand = Plus / Minus

                                                           
Query: 519   aggcattgcgtggtggagaagatattggttctggattccgaagaga 564
             |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 52550 aggcattgcgtggtggagaagatattggttctgggttccgaagaga 52505
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>gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 773

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 776

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 cgtcgcccccgtctccccctc 197
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156
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>emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on chromosome 1 Contains the 5'
              end of the TESK2 gene for testis-specific kinase 2, a
              peptidylprolyl isomerase A (cyclophilin A) (PPIA)
              pseudogene, a novel gene, a novel gene (DKFZP564I122) and
              the 3' end of the PRDX1 gene for peroxiredoxin 1, complete
              sequence
          Length = 137143

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 378    catacagggaagaaagcaaaaaagc 402
              |||||||||||||||||| ||||||
Sbjct: 102678 catacagggaagaaagcataaaagc 102702
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>ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predicted mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 244  cgtcaacctcggcctcgagttcttc 268
            ||||||||||||||||| |||||||
Sbjct: 1030 cgtcaacctcggcctcgggttcttc 1006
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>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12
          Length = 239050

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 427    gcgagattacaatctcaaatt 447
              |||||||||||||||||||||
Sbjct: 179238 gcgagattacaatctcaaatt 179258
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   aacccacctttcccttctctc 63
            |||||||||||||||||||||
Sbjct: 5189 aacccacctttcccttctctc 5169
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>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence
          Length = 44117

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   gcggctccgacggcggagtcg 241
             |||||||||||||||||||||
Sbjct: 28957 gcggctccgacggcggagtcg 28937
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>gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymerase gene, partial
           cds
          Length = 1702

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 167 aacgcgtcctcgtcgcccccg 187
           |||||||||||||||||||||
Sbjct: 515 aacgcgtcctcgtcgcccccg 495
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   aacgcgtcctcgtcgcccccg 187
             |||||||||||||||||||||
Sbjct: 65359 aacgcgtcctcgtcgcccccg 65339
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 244     cgtcaacctcggcctcgagttcttc 268
               ||||||||||||||||| |||||||
Sbjct: 2033742 cgtcaacctcggcctcgggttcttc 2033718
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 63      cggccggcggcggaatccccaacc 86
               ||||| ||||||||||||||||||
Sbjct: 3837167 cggcccgcggcggaatccccaacc 3837190
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>emb|Z82072.1|CEW05H12 Caenorhabditis elegans Cosmid W05H12, complete sequence
          Length = 9614

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cctccttcgccggagaaggc 213
            ||||||||||||||||||||
Sbjct: 2435 cctccttcgccggagaaggc 2454
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 179      tcgcccccgtctccccctcc 198
                ||||||||||||||||||||
Sbjct: 23668544 tcgcccccgtctccccctcc 23668563
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     aggcggtcgaggcggctccg 229
               ||||||||||||||||||||
Sbjct: 2942267 aggcggtcgaggcggctccg 2942248
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>dbj|AK111522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M11, full
           insert sequence
          Length = 2776

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 179 tcgcccccgtctccccctcc 198
           ||||||||||||||||||||
Sbjct: 229 tcgcccccgtctccccctcc 248
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 179      tcgcccccgtctccccctcc 198
                ||||||||||||||||||||
Sbjct: 23596731 tcgcccccgtctccccctcc 23596750
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>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tcgcccccgtctccccctcc 198
             ||||||||||||||||||||
Sbjct: 37866 tcgcccccgtctccccctcc 37847
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>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tcgcccccgtctccccctcc 198
             ||||||||||||||||||||
Sbjct: 87078 tcgcccccgtctccccctcc 87059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,489,501
Number of Sequences: 3902068
Number of extensions: 4489501
Number of successful extensions: 92469
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92160
Number of HSP's gapped (non-prelim): 304
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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