ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21j17 |
|---|---|
| Clone Library Name | barley_pub |
>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor| Length = 177 Score = 87.4 bits (215), Expect = 2e-17 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 2/149 (1%) Frame = +1 Query: 82 VVLGLDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS--KGKRD 255 VV D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ +G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGG-LNVINKGYNPDRGMWQ 87 Query: 256 YIEGTAYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLW 435 EG AY A A LKV F+ P + G Y V+ +D +Y++ALV P R LW Sbjct: 88 QSEGKAYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 139 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAK 522 IL R I +EV ++L A EG+DV+K Sbjct: 140 ILSRTPTISDEVKQEMLAVATREGFDVSK 168
>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor| Length = 177 Score = 87.4 bits (215), Expect = 2e-17 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 2/149 (1%) Frame = +1 Query: 82 VVLGLDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS--KGKRD 255 VV D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ +G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGG-LNVINKGYNPDRGMWQ 87 Query: 256 YIEGTAYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLW 435 EG AY A A LKV F+ P + G Y V+ +D +Y++ALV P R LW Sbjct: 88 QSEGKAYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 139 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAK 522 IL R I +EV ++L A EG+DV+K Sbjct: 140 ILSRTPTISDEVKQEMLAVATREGFDVSK 168
>BLC_CITFR (Q46036) Outer membrane lipoprotein blc precursor| Length = 177 Score = 85.9 bits (211), Expect = 7e-17 Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 3/151 (1%) Frame = +1 Query: 82 VVLGLDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDY- 258 VV D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ + + Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGG-INVINKGYNPDREMWQ 87 Query: 259 -IEGTAY-KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSL 432 EG AY DP++ A LKV F+ P + G Y V+ +D +Y++ALV P R L Sbjct: 88 KTEGKAYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYL 138 Query: 433 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKL 525 WIL R I +E+ Q+L A EG++V KL Sbjct: 139 WILSRTPTISDEMKQQMLAIATREGFEVNKL 169
>YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor| Length = 169 Score = 78.2 bits (191), Expect = 1e-14 Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 2/146 (1%) Frame = +1 Query: 94 LDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTA 273 LD+ RYMG WYEIA P FQ + ++ A Y+L+E + V N G+ + + GTA Sbjct: 28 LDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPN-KIQVTNNCEINGRINSVTGTA 85 Query: 274 YKADPASDEAKLKVKFYVPPFLPIIPVVG--DYWVLYVDDDYQYALVGEPRRKSLWILCR 447 PA++ ++ F P L + G Y V+++D++YQYA+V +LWIL R Sbjct: 86 I---PAAN-TRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGGNDTLWILSR 140 Query: 448 KTHIEEEVYNQLLEKAKEEGYDVAKL 525 +I + YNQL+ +GYDV L Sbjct: 141 FKNINQSTYNQLVTIVYNQGYDVNNL 166
>BLC_VIBCH (Q08790) Outer membrane lipoprotein blc precursor (Protein vlp)| Length = 171 Score = 74.7 bits (182), Expect = 2e-13 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 3/150 (2%) Frame = +1 Query: 85 VLGLDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDY-- 258 V ++ Y+G+WYE+A + F+ R A Y + DG + VLN +S+ K ++ Sbjct: 26 VSDFELNNYLGKWYEVARLDHSFE-RGLSQVTAEYRVRNDGG-ISVLNRGYSEEKGEWKE 83 Query: 259 IEGTAYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVD-DDYQYALVGEPRRKSLW 435 EG AY + ++D LKV F+ P + G Y V +D ++Y YA V P + LW Sbjct: 84 AEGKAYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTEYLW 135 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKL 525 +L R +E + ++ +E +KE G+D +L Sbjct: 136 LLSRTPTVERGILDKFIEMSKERGFDTNRL 165
>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 71.2 bits (173), Expect = 2e-12 Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 8/158 (5%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS-KGKRDYIEGTA 273 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN+ S G + ++G A Sbjct: 38 DVKKYLGRWYEIEKIPASFE--KGNCIQANYSLMENG-NIEVLNKELSPDGTMNQVKGEA 94 Query: 274 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSL 432 K S+ AKL+V+F+ P +P P YW+L D + YALV + Sbjct: 95 -KQSNVSEPAKLEVQFF--PLMPPAP----YWILATDYE-NYALVYSCTTFFWLFHVDFV 146 Query: 433 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSD 546 WIL R ++ E L + G D+ K+ T Q++ Sbjct: 147 WILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQAN 184
>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 67.0 bits (162), Expect = 3e-11 Identities = 54/157 (34%), Positives = 72/157 (45%), Gaps = 7/157 (4%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 276 D +Y GRWYEI P F+ GR +A Y L E+G + E + G + IEG A Sbjct: 38 DPNKYFGRWYEIEKIPTTFE--KGRCIQANYSLKENGKIKVLNQELRADGTVNQIEGEAS 95 Query: 277 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLW 435 + ++ AKL+VKF+ F+P P YWVL D + YALV R W Sbjct: 96 PVN-ITEPAKLEVKFFW--FMPSAP----YWVLATDYE-NYALVYSCVSIINLFRVDYAW 147 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSD 546 IL R H+ E + L DV K+ T Q + Sbjct: 148 ILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQEN 184
>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 66.6 bits (161), Expect = 4e-11 Identities = 53/155 (34%), Positives = 73/155 (47%), Gaps = 7/155 (4%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 276 DV +Y+GRWYEI P F+ +GR +A Y LME+G + E + G + IEG A Sbjct: 38 DVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEAT 95 Query: 277 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLW 435 + ++ AKL+VKF F+P P YW+L D + YALV W Sbjct: 96 PVN-LTEPAKLEVKF--SWFMPSAP----YWILATDYE-NYALVYSCTCIIQLFHVDFAW 147 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQ 540 IL R ++ E + L DV K+ T Q Sbjct: 148 ILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQ 182
>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 63.9 bits (154), Expect = 3e-10 Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 8/156 (5%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTA 273 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN E G + IEG A Sbjct: 39 DVHKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENG-NIKVLNQELRPDGTVNQIEGQA 95 Query: 274 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSL 432 +++ ++ AKL VKF+ +P P YWVL D + YALV + Sbjct: 96 TQSN-LTEPAKLGVKFF--QLMPTAP----YWVLATDYE-NYALVYSCTTIIWLFHMDHV 147 Query: 433 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQ 540 WIL R ++ E L + D+ K+ T Q Sbjct: 148 WILGRNRYLPPETVTYLKDILTANNIDIEKMTVTDQ 183
>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 63.5 bits (153), Expect = 4e-10 Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 7/157 (4%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 276 D+ +Y+GRWYEI P F+ G +A Y L E+G + E G + IEG A Sbjct: 38 DLNKYLGRWYEIEKIPVSFE--KGNCIQANYSLKENGRVKVLNQELRPDGTVNQIEGEAT 95 Query: 277 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSLW 435 ++ ++ AKL VKF+ +P P YWVL D D YALV +W Sbjct: 96 HSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYD-NYALVYSCTNIIWLFHVDHIW 147 Query: 436 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSD 546 IL R ++ +E L + D+ K+ T Q++ Sbjct: 148 ILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQAN 184
>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 62.8 bits (151), Expect = 6e-10 Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 8/158 (5%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTA 273 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN E G + +EG A Sbjct: 38 DVKKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENG-NIKVLNKELRPDGTLNQVEGEA 94 Query: 274 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSL 432 K S+ AKL+V+F+ +P P YW+L D + YALV + Sbjct: 95 -KQSNMSEPAKLEVQFF--SLMPPAP----YWILATDYE-SYALVYSCTTFFWFFHVDYV 146 Query: 433 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSD 546 WIL R ++ E L D+AK+ Q++ Sbjct: 147 WILGRNPYLPPETITYLKYILTSNDIDIAKITTKDQAN 184
>LAZA_SCHAM (P49291) Lazarillo protein precursor| Length = 214 Score = 47.8 bits (112), Expect = 2e-05 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 7/152 (4%) Frame = +1 Query: 109 YMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAYKADP 288 YMG+WYE A + G A Y + + TV + + + + G A A Sbjct: 42 YMGKWYEYAKMGSMPYEEGGVCVTAEYSMSSNNITVVNSMKDNTTHEVNTTTGWAEFASE 101 Query: 289 ASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVD-DDYQ--YALVGEP----RRKSLWILCR 447 + KL V F P P VG+YW+L D D+Y ++ V P + WIL R Sbjct: 102 LHTDGKLSVHF------PNSPSVGNYWILSTDYDNYSIVWSCVKRPDSAASTEISWILLR 155 Query: 448 KTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQS 543 + ++ ++ K D+ K KT QS Sbjct: 156 SRNSSNMTLERVEDELKNLQLDLNKYTKTEQS 187
>BBP_PIEBR (P09464) Bilin-binding protein precursor (BBP)| Length = 189 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/68 (36%), Positives = 37/68 (54%) Frame = +1 Query: 73 EMGVVLGLDVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKR 252 E+ V D + Y G+W+E+A +PN + + G+ A Y +G +V V N GK Sbjct: 25 EVKPVDNFDWSNYHGKWWEVAKYPNSVE-KYGKCGWAEY--TPEGKSVKVSNYHVIHGKE 81 Query: 253 DYIEGTAY 276 +IEGTAY Sbjct: 82 YFIEGTAY 89
>ICYA_MANSE (P00305) Insecticyanin A form (Blue biliprotein) (INS-a)| Length = 189 Score = 35.8 bits (81), Expect = 0.083 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 276 D++ + G W+EIA P G+ T A Y+ DG V N S G ++Y+EG Sbjct: 19 DLSAFAGAWHEIAKLP-LENENQGKCTIAEYKY--DGKKASVYNSFVSNGVKEYMEG--- 72 Query: 277 KADPASDEAKLKVKFYVPPF------LPIIPVVGDYWVL---YVDDDYQYALVGEPRRKS 429 + A D K YV F + ++P WVL Y + Y P +K+ Sbjct: 73 DLEIAPDAKYTKQGKYVMTFKFGQRVVNLVP-----WVLATDYKNYAINYNCDYHPDKKA 127 Query: 430 ----LWILCRKTHIE---EEVYNQLLE 489 WIL + +E +EV + +L+ Sbjct: 128 HSIHAWILSKSKVLEGNTKEVVDNVLK 154
>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)| Length = 2414 Score = 33.9 bits (76), Expect = 0.31 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = -3 Query: 213 RGAVLHELVGRPRVAPVARLEEVGEGRDLVPPPHVPRNVQP-QHHAHLA 70 RG+V ++++ PR+ P + L + G+ + PP VPR P QHH LA Sbjct: 695 RGSVPNQMM--PRITPQSGLNQFGQ-MSMAQPPIVPRQTPPLQHHGQLA 740
>ICYB_MANSE (Q00630) Insecticyanin B form precursor (Blue biliprotein) (INS-b)| Length = 206 Score = 33.5 bits (75), Expect = 0.41 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 16/147 (10%) Frame = +1 Query: 97 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 276 D++ + G W+EIA P G+ T A Y+ DG V N G ++Y+EG Sbjct: 36 DLSAFAGAWHEIAKLP-LENENQGKCTIAEYKY--DGKKASVYNSFVVNGVKEYMEG--- 89 Query: 277 KADPASDEAKLKVKFYVPPF------LPIIPVVGDYWVL---YVDDDYQYALVGEPRRKS 429 + A D K YV F + ++P WVL Y + Y P +K+ Sbjct: 90 DLEIAPDAKYTKQGKYVMTFKFGQRVVNLVP-----WVLATDYKNYAINYNCNYHPDKKA 144 Query: 430 ----LWILCRKTHIE---EEVYNQLLE 489 WIL + +E +EV + +L+ Sbjct: 145 HSIHAWILSKSKVLEGNTKEVVDNVLK 171
>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 513 Score = 30.8 bits (68), Expect = 2.7 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +1 Query: 433 WILCRKTHIEEEVYNQLLEKAKEEGYDVAK 522 W+L + +H+E E+ ++ K++ GYD K Sbjct: 327 WLLSKHSHVENEILKEITGKSETVGYDEVK 356
>PDI2_SCHPO (O13811) Protein disulfide-isomerase C17H9.14c precursor (EC| 5.3.4.1) Length = 359 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 82 VVLGLDVARYMGRWYEIASFPNF-FQPRDGRDTRATYE 192 V + DV +GR +E+ASFP F P+D +D YE Sbjct: 196 VKINADVFADIGRLHEVASFPTIKFFPKDDKDKPELYE 233
>UD11_HUMAN (P22309) UDP-glucuronosyltransferase 1-1 precursor (EC 2.4.1.17)| (UDP-glucuronosyltransferase 1A1) (UDPGT) (UGT1*1) (UGT1-01) (UGT1.1) (UGT-1A) (UGT1A) (Bilirubin-specific UDPGT isozyme 1) (HUG-BR1) Length = 533 Score = 30.4 bits (67), Expect = 3.5 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 11/106 (10%) Frame = +1 Query: 82 VVLGLDVARYM--GRWYEIASFPNFFQPRDGRDTRAT--YELMEDGATVHVLNETWSKGK 249 VVL D + Y+ G +Y + ++P FQ D +++ + + + E+ + + + +T+ K K Sbjct: 58 VVLAPDASLYIRDGAFYTLKTYPVPFQREDVKESFVSLGHNVFENDSFLQRVIKTYKKIK 117 Query: 250 RD---YIEGTAYKADPASDEAKLKVKFY----VPPFLPIIPVVGDY 366 +D + G ++ A L + PFLP P+V Y Sbjct: 118 KDSAMLLSGCSHLLHNKELMASLAESSFDVMLTDPFLPCSPIVAQY 163
>ERBP_RAT (P06911) Epididymal retinoic acid-binding protein precursor| (E-RABP) (Androgen-dependent epididymal 18.5 kDa protein) (Epididymal secretory protein I) (ESP-I) Length = 188 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 Query: 67 GSEMGVVLGLDVARYMGRWYEIA 135 G+E VV D+++++G WYEIA Sbjct: 19 GTEGAVVKDFDISKFLGFWYEIA 41
>Y1163_AQUAE (O67227) Hypothetical protein aq_1163| Length = 125 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +1 Query: 352 VVGDYWVLYVDDDYQYALVGE---PRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYD 513 V G+ W++YVD +A + E PR ++ W R I E + ++EE YD Sbjct: 61 VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYD 117
>NEBU_HUMAN (P20929) Nebulin| Length = 6669 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 Query: 448 KTHIEEEVYNQLLEKAKEEGYDV 516 K + E +Y Q +E+AK+EGYD+ Sbjct: 3236 KINYSESLYRQAMEEAKKEGYDL 3258 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,491,273 Number of Sequences: 219361 Number of extensions: 849442 Number of successful extensions: 3658 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3584 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3645 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
