ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full i... 448 e-123
2ref|XM_470138.1| Oryza sativa (japonica cultivar-group), mRNA 103 4e-19
3dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
4dbj|AK058941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
5emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing ... 72 1e-09
6gb|AY109068.1| Zea mays PCO068743 mRNA sequence 68 2e-08
7gb|BT016543.1| Zea mays clone Contig376 mRNA sequence 64 3e-07
8gb|BT018082.1| Zea mays clone EL01N0552A09.c mRNA sequence 64 3e-07
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 3e-07
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
11gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 64 3e-07
12gb|AY103749.1| Zea mays PCO115125 mRNA sequence 64 3e-07
13ref|XM_473455.1| Oryza sativa (japonica cultivar-group), predic... 50 0.005
14dbj|AK069329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
15gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 50 0.005
16gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 44 0.29
17gb|AC141106.9| Medicago truncatula clone mth2-33e18, complete se... 44 0.29
18gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete se... 44 0.29
19dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone... 44 0.29
20gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, com... 42 1.1
21ref|XM_811053.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.1
22gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl... 40 4.5
23dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 4.5
24gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 ma... 40 4.5
25gb|AY112267.1| Zea mays CL5157_2 mRNA sequence 40 4.5
26emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on ch... 40 4.5 
>gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full insert mRNA
           sequence
          Length = 2114

 Score =  448 bits (226), Expect = e-123
 Identities = 256/266 (96%)
 Strand = Plus / Minus

                                                                       
Query: 77  ccgcttcataacctacaggctggagaaccagaaggaggtcattgtggaccaaaccgggca 136
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 623 ccgcttcataacctacaggctggagaaccagaaggaggtcattgtggaccaaactgggga 564

                                                                       
Query: 137 gcgcgatgccacctatgaggatttcaccaagaccctccctgaaaacgactgccgattcgc 196
           ||| || || ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 563 gcgtgaggcaacctatgaggacttcaccaagaccctccctgagaacgactgccgattcgc 504

                                                                       
Query: 197 agtgtttgacttcgacttcaccaccccggaggatgtgccaaagagcaggatcttctatat 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agtgtttgacttcgacttcaccaccccggaggatgtgccaaagagcaggatcttctatat 444

                                                                       
Query: 257 cttctggtccccagacaccgcaaaggtgaggagcaagatgacgtacgcaagcaccaacga 316
           |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 443 cttctggtcccccgacacggcaaaggtgaggagcaagatgacgtacgcgagcaccaacga 384

                                     
Query: 317 gaagttcaagaggaccctggacggca 342
           ||||||||||||||||||||||||||
Sbjct: 383 gaagttcaagaggaccctggacggca 358
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>ref|XM_470138.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 778

 Score =  103 bits (52), Expect = 4e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 225 gaggatgtgccaaagagcaggatcttctatatcttctggtccccagacaccgcaaaggtg 284
           ||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||| |||
Sbjct: 367 gaggatgtgccaaagagcaggatattctatatcttatggtccccagacaatgcaaaagtg 426

                       
Query: 285 aggagcaagatg 296
           ||||||||||||
Sbjct: 427 aggagcaagatg 438



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
           ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 166 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 225

             
Query: 87  ac 88
           ||
Sbjct: 226 ac 227
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>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  103 bits (52), Expect = 4e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                        
Query: 225  gaggatgtgccaaagagcaggatcttctatatcttctggtccccagacaccgcaaaggtg 284
            ||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||| |||
Sbjct: 1976 gaggatgtgccaaagagcaggatattctatatcttatggtccccagacaatgcaaaagtg 2035

                        
Query: 285  aggagcaagatg 296
            ||||||||||||
Sbjct: 2036 aggagcaagatg 2047



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 27   catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
            ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 1775 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 1834

              
Query: 87   ac 88
            ||
Sbjct: 1835 ac 1836
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>dbj|AK058941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H02, full
           insert sequence
          Length = 758

 Score =  103 bits (52), Expect = 4e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                       
Query: 225 gaggatgtgccaaagagcaggatcttctatatcttctggtccccagacaccgcaaaggtg 284
           ||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||| |||
Sbjct: 349 gaggatgtgccaaagagcaggatattctatatcttatggtccccagacaatgcaaaagtg 408

                       
Query: 285 aggagcaagatg 296
           ||||||||||||
Sbjct: 409 aggagcaagatg 420



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
           ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 148 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 207

             
Query: 87  ac 88
           ||
Sbjct: 208 ac 209
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>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor
          Length = 801

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||||||||||||||||| | |||||||||  | |||| ||||||| ||||||||||
Sbjct: 388 aagagcaggatcttctatatcctatggtccccatcctccgccaaggtgaagagcaagatg 447

                                           
Query: 297 acgtacgcaagcaccaacgagaagttcaagag 328
              ||||||||| | ||| |||| ||||||||
Sbjct: 448 ctttacgcaagctcaaaccagaaattcaagag 479



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 61  agtccaagaggatgcaccgcttcataac 88
           |||| |||||| ||||||||||||||||
Sbjct: 209 agtcgaagaggctgcaccgcttcataac 236
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>gb|AY109068.1| Zea mays PCO068743 mRNA sequence
          Length = 731

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  gacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcataacc 89
           |||||||||||||   ||||| ||||||||||| ||||||||| |||||||||||| | |
Sbjct: 161 gacgactgcaagcgccggttcctggagctcaaggccaagaggacgcaccgcttcatcatc 220

                 
Query: 90  tacagg 95
           ||||||
Sbjct: 221 tacagg 226



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 282 gtgaggagcaagatgacgtacgcaagcaccaacgagaagttcaag 326
           ||||||||||||||||  ||||| ||| |||| |||| |||||||
Sbjct: 416 gtgaggagcaagatgatctacgccagctccaaggagaggttcaag 460
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>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence
          Length = 881

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||||||||||||||||| | |||||||||  | |||| ||||||| ||||||||||
Sbjct: 414 aagagcaggatcttctatatcctatggtccccatcctccgccaaggtgaagagcaagatg 473



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 61  agtccaagaggatgcaccgcttcataac 88
           |||| |||||| ||||||||||||||||
Sbjct: 235 agtcgaagaggctgcaccgcttcataac 262
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>gb|BT018082.1| Zea mays clone EL01N0552A09.c mRNA sequence
          Length = 837

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||||||||||||||||| | |||||||||  | |||| ||||||| ||||||||||
Sbjct: 387 aagagcaggatcttctatatcctatggtccccatcctccgccaaggtgaagagcaagatg 446
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 225      gaggatgtgccaaagagcaggatcttctatatcttctggt 264
                ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 34129803 gaggatgtgccaaagagcaggatattctatatcttatggt 34129842



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 27       catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
                ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 34129602 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 34129661

                  
Query: 87       ac 88
                ||
Sbjct: 34129662 ac 34129663



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 262      ggtccccagacaccgcaaaggtgaggagcaagatg 296
                ||||||||||||  ||||| |||||||||||||||
Sbjct: 34129929 ggtccccagacaatgcaaaagtgaggagcaagatg 34129963
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                        
Query: 225      gaggatgtgccaaagagcaggatcttctatatcttctggt 264
                ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 34220275 gaggatgtgccaaagagcaggatattctatatcttatggt 34220314



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 27       catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
                ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 34220074 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 34220133

                  
Query: 87       ac 88
                ||
Sbjct: 34220134 ac 34220135



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 262      ggtccccagacaccgcaaaggtgaggagcaagatg 296
                ||||||||||||  ||||| |||||||||||||||
Sbjct: 34220401 ggtccccagacaatgcaaaagtgaggagcaagatg 34220435
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 225   gaggatgtgccaaagagcaggatcttctatatcttctggt 264
             ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 93615 gaggatgtgccaaagagcaggatattctatatcttatggt 93654



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 27    catgacgactgcaagctgaggttcgtggagctcaagtccaagaggatgcaccgcttcata 86
             ||||| || |||||||||| ||||   |||||  ||||||| ||||||||||||||||||
Sbjct: 93414 catgatgattgcaagctgaagttcaatgagctacagtccaaaaggatgcaccgcttcata 93473

               
Query: 87    ac 88
             ||
Sbjct: 93474 ac 93475



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 262   ggtccccagacaccgcaaaggtgaggagcaagatg 296
             ||||||||||||  ||||| |||||||||||||||
Sbjct: 93741 ggtccccagacaatgcaaaagtgaggagcaagatg 93775
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>gb|AY103749.1| Zea mays PCO115125 mRNA sequence
          Length = 965

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||||||||||||||||| | |||||||||  | |||| ||||||| ||||||||||
Sbjct: 437 aagagcaggatcttctatatcctatggtccccatcctccgccaaggtgaagagcaagatg 496



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 61  agtccaagaggatgcaccgcttcataac 88
           |||| |||||| ||||||||||||||||
Sbjct: 258 agtcgaagaggctgcaccgcttcataac 285
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>ref|XM_473455.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 420

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||| ||||||||  |||| |||||| || |||||  | ||||||||||||||||||
Sbjct: 244 aagagcaagatcttcttcatctcctggtcgccggacacgtcgaaggtgaggagcaagatg 303

                            
Query: 297 acgtacgcaagcaccaa 313
             |||||| ||| ||||
Sbjct: 304 ctgtacgcgagctccaa 320
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>dbj|AK069329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P16, full
           insert sequence
          Length = 778

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||| ||||||||  |||| |||||| || |||||  | ||||||||||||||||||
Sbjct: 330 aagagcaagatcttcttcatctcctggtcgccggacacgtcgaaggtgaggagcaagatg 389

                            
Query: 297 acgtacgcaagcaccaa 313
             |||||| ||| ||||
Sbjct: 390 ctgtacgcgagctccaa 406
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>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
              hypothetical protein, putative NAM protein, putative
              cis-zeatin O-glucosyltransferases, putative small nuclear
              ribonucleoprotein, putative cis-zeatin
              O-glucosyltransferase, putative glutathione peroxidase,
              putative copper-exporting ATPases, putative
              serine/threonine dehydratase, and putative actin
              depolymerizing factor genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 157237

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                          
Query: 262    ggtccccagacaccgcaaaggtgaggagcaagatgacgtacgcaagcaccaacgagaagt 321
              ||||||| |||||| | ||||||||||||||||||  |||||| ||| |||| ||   ||
Sbjct: 148289 ggtccccggacacctcgaaggtgaggagcaagatgctgtacgcgagctccaaggaccggt 148348

                                   
Query: 322    tcaagaggaccctggacggca 342
              ||||||||   ||||||||||
Sbjct: 148349 tcaagagggagctggacggca 148369
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>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 276   gcaaaggtgaggagcaagatgacgtacgcaagcaccaacgagaagttcaagagg 329
             |||| |||||| ||||||||||  || ||||||||||| || | ||||||||||
Sbjct: 67059 gcaagggtgagaagcaagatgatttatgcaagcaccaaagaaaggttcaagagg 67112
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>gb|AC141106.9| Medicago truncatula clone mth2-33e18, complete sequence
          Length = 105951

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 25    tccatgacgactgcaagctgaggttcgtggagctcaag 62
             ||||||| ||||||||| |||||||  |||||||||||
Sbjct: 24465 tccatgatgactgcaagttgaggtttatggagctcaag 24502
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>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence
          Length = 106286

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 25    tccatgacgactgcaagctgaggttcgtggagctcaag 62
             ||||||| ||||||||| |||||||  |||||||||||
Sbjct: 92633 tccatgatgactgcaagttgaggtttatggagctcaag 92670
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>dbj|AP004908.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT12N11, TM0066,
             complete sequence
          Length = 79585

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 25    tccatgacgactgcaagctgaggttcgtggagctcaag 62
             ||||||| ||||||||||| |||||  |||||||||||
Sbjct: 29697 tccatgatgactgcaagctaaggtttatggagctcaag 29660
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>gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, complete sequence
          Length = 180645

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    gagaagttcaagaggaccctg 335
              |||||||||||||||||||||
Sbjct: 138067 gagaagttcaagaggaccctg 138047
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>ref|XM_811053.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510885.10) partial mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 93  aggctggagaaccagaaggag 113
           |||||||||||||||||||||
Sbjct: 28  aggctggagaaccagaaggag 8
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>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    gatgccacctatgaggattt 160
              ||||||||||||||||||||
Sbjct: 129527 gatgccacctatgaggattt 129508
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     ccaccccggaggatgtgcca 236
               ||||||||||||||||||||
Sbjct: 5583276 ccaccccggaggatgtgcca 5583257
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>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence
          Length = 232472

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   gatgccacctatgaggattt 160
             ||||||||||||||||||||
Sbjct: 51786 gatgccacctatgaggattt 51767
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>gb|AY112267.1| Zea mays CL5157_2 mRNA sequence
          Length = 779

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 aagagcaggatcttctatatcttctggtccccagacaccgcaaaggtgaggagcaagatg 296
           ||||||| |||||| |  |||| ||||||||| |||||| | | ||| ||||||||||||
Sbjct: 573 aagagcaagatcttgttcatctcctggtccccggacacctcgagggtcaggagcaagatg 514
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>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete
             sequence
          Length = 190641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    gctggagaaccagaaggagg 114
             ||||||||||||||||||||
Sbjct: 57679 gctggagaaccagaaggagg 57660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,437,418
Number of Sequences: 3902068
Number of extensions: 2437418
Number of successful extensions: 51521
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51425
Number of HSP's gapped (non-prelim): 96
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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