>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 373  aaccgtgcatcggattaaaataaattaaatat 404
            ||||||||||||||||||||||||||| ||||
Sbjct: 9469 aaccgtgcatcggattaaaataaattatatat 9438



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 373  aaccgtgcatcggattaaaataaattaaatat 404
            |||||||||| |||||||||||||||| ||||
Sbjct: 1879 aaccgtgcattggattaaaataaattatatat 1848

>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 352   tcatgcatttaatatctcacaaaccgtgcatcggattaaaat 393
             |||||||||||||| || |  |||||||||||||||||||||
Sbjct: 29401 tcatgcatttaataactaattaaccgtgcatcggattaaaat 29442

>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence
          Length = 163910

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 345    ctagacttcatgcatttaatat 366
              ||||||||||||||||||||||
Sbjct: 109308 ctagacttcatgcatttaatat 109287

>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
              BACR11M13, complete sequence
          Length = 190301

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 385    gattaaaataaattaaatata 405
              |||||||||||||||||||||
Sbjct: 140947 gattaaaataaattaaatata 140967

>gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 82F-83A, BAC clone
            BACR42H10, complete sequence
          Length = 181009

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  gattaaaataaattaaatata 405
            |||||||||||||||||||||
Sbjct: 6399 gattaaaataaattaaatata 6379

>gb|AC007532.8| Drosophila melanogaster, chromosome 3R, region 82F-82F, BAC clone
             BACR01D10, complete sequence
          Length = 171105

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   gattaaaataaattaaatata 405
             |||||||||||||||||||||
Sbjct: 46041 gattaaaataaattaaatata 46061

>gb|AC008332.11|AC008332 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
             BACR48D10, complete sequence
          Length = 153250

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   gattaaaataaattaaatata 405
             |||||||||||||||||||||
Sbjct: 81135 gattaaaataaattaaatata 81155

>emb|BX544883.7| Mouse DNA sequence from clone RP23-302B23 on chromosome X, complete
            sequence
          Length = 133236

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  gattaaaataaattaaatata 405
            |||||||||||||||||||||
Sbjct: 6401 gattaaaataaattaaatata 6381

>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete
             sequence
          Length = 254309

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 385   gattaaaataaattaaatata 405
             |||||||||||||||||||||
Sbjct: 84383 gattaaaataaattaaatata 84403

>gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 of 118 of the complete
              sequence
          Length = 265289

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    gattaaaataaattaaatata 405
              |||||||||||||||||||||
Sbjct: 127239 gattaaaataaattaaatata 127219

>emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chromosome X, complete
             sequence
          Length = 87910

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 356   gcatttaatatctcacaaacc 376
             |||||||||||||||||||||
Sbjct: 80701 gcatttaatatctcacaaacc 80681

>gb|AC109464.2| Homo sapiens chromosome 5 clone RP11-284A20, complete sequence
          Length = 161641

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 354    atgcatttaatatctcacaaa 374
              |||||||||||||||||||||
Sbjct: 117018 atgcatttaatatctcacaaa 117038

>gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, complete sequence
          Length = 180645

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   gcccagctgcgtgcaaaggc 156
             ||||||||||||||||||||
Sbjct: 59417 gcccagctgcgtgcaaaggc 59436

>emb|AL121755.23|HSDJ680N4 Human DNA sequence from clone RP4-680N4 on chromosome 20 Contains the
             3' end of the CDS2 gene for CDP-diacylglycerol synthase
             (phosphatidate cytidylyltransferase) 2, the gene for a
             novel protein similar to ubiquitin-conjugating enzyme E2D
             3 (UBC4/5 homolog, yeast) (UBE2D3), the GPR73L1 gene for G
             protein-coupled receptor 73-like 1 (prokineticin receptor
             2, PKR2, GPR73b) and a CpG island, complete sequence
          Length = 143892

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   acaaaaaaccctagacttca 354
             ||||||||||||||||||||
Sbjct: 22119 acaaaaaaccctagacttca 22100

>emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chromosome 4, complete
             sequence
          Length = 206507

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   gattaaaataaattaaatat 404
             ||||||||||||||||||||
Sbjct: 15631 gattaaaataaattaaatat 15612

>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14,
             complete sequence
          Length = 204730

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 46320 attaaaataaattaaatata 46301

>emb|BX511256.9| Zebrafish DNA sequence from clone DKEY-58M10 in linkage group 1,
             complete sequence
          Length = 232496

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 20323 attaaaataaattaaatata 20342

>dbj|AK123831.1| Homo sapiens cDNA FLJ41837 fis, clone NT2RI3001445
          Length = 3619

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 acaaaaaaccctagacttca 354
           ||||||||||||||||||||
Sbjct: 441 acaaaaaaccctagacttca 422

>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14,
              complete sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    gattaaaataaattaaatat 404
              ||||||||||||||||||||
Sbjct: 190071 gattaaaataaattaaatat 190090

>gb|AC155303.2| Mus musculus BAC clone RP24-212A21 from chromosome 13, complete sequence
          Length = 156551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    attaaaataaattaaatata 405
              ||||||||||||||||||||
Sbjct: 117100 attaaaataaattaaatata 117119

>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 195877

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   acaaaaaaccctagacttca 354
             ||||||||||||||||||||
Sbjct: 12182 acaaaaaaccctagacttca 12163

>gb|AC153516.8| Mus musculus 10 BAC RP23-390D8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197506

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    acaaaaaaccctagacttca 354
              ||||||||||||||||||||
Sbjct: 158159 acaaaaaaccctagacttca 158140

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 386      attaaaataaattaaatata 405
                ||||||||||||||||||||
Sbjct: 13922153 attaaaataaattaaatata 13922172

>gb|AC154252.1| Mus musculus BAC clone RP24-197M20 from chromosome 13, complete
             sequence
          Length = 176702

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 46078 attaaaataaattaaatata 46097

>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0435D08
          Length = 148912

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 75830 attaaaataaattaaatata 75849

>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0650H04
          Length = 134533

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 24627 attaaaataaattaaatata 24646

>emb|AL606705.23| Zebrafish DNA sequence from clone BUSM1-175P5 in linkage group 15,
             complete sequence
          Length = 92464

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 19316 attaaaataaattaaatata 19297

>emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chromosome 2, complete
             sequence
          Length = 226324

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   attaaaataaattaaatata 405
             ||||||||||||||||||||
Sbjct: 61543 attaaaataaattaaatata 61562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,112,400
Number of Sequences: 3902068
Number of extensions: 3112400
Number of successful extensions: 76340
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76238
Number of HSP's gapped (non-prelim): 102
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)