ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21g24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2208 Score = 488 bits (246), Expect = e-134 Identities = 513/602 (85%) Strand = Plus / Plus Query: 20 aacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgtcgtcaaggtcggc 79 |||| ||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||| Sbjct: 64 aacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcatcatcaaggtcggc 123 Query: 80 accgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggagctctctgc 139 ||||||||||| || |||| ||||||||| | || |||||||||||||| ||||| || Sbjct: 124 accgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtgctctgtgt 183 Query: 140 gagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgcc 199 || ||||||||| |||| ||||| ||||||| |||||||| ||||||||||| || || Sbjct: 184 gaacaggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgct 243 Query: 200 gttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacagcagctttgcggat 259 ||||| || ||||||||||||||||||||||||||||| |||| ||||| || || ||| Sbjct: 244 gttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatagcagtttcgctgat 303 Query: 260 ctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagtggc 319 ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 304 ctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagtgtg 363 Query: 320 ctcatggctatctacgatacgctgtttagccaacttgatgtgacatcgtctcagcttctt 379 || ||||| ||||| || ||| | |||||||| ||||| || ||||| |||||||||||| Sbjct: 364 ctgatggcgatctatgacacgttatttagccagcttgacgtaacatcatctcagcttctt 423 Query: 380 gtcaccgatcgcgatttccgggatccaagttttgggcaccagcttcgtgagactgtcgtc 439 || || ||||| ||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 424 gttacggatcgtgattttatggatccaagttttgggaaccagctccgcgagactgttaat 483 Query: 440 tctctgttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgagg 499 |||||||||||||| || || |||||||| ||||||||||| || || |||||||| ||| Sbjct: 484 tctctgttagatctcaaggttataccagtatttaatgagaatgacgccatcagtaccagg 543 Query: 500 agagcgccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctg 559 || ||||||||||||||||| || ||||||||||||||||| |||||||| | ||| Sbjct: 544 aggcaaccatacgaggattcatctggcatattctgggataacgatagtttggccagactg 603 Query: 560 ttggcaaaagaactggacgctgatcttcttatcatgcttagtgatgtggagggactctat 619 || || ||||||| | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 604 ttagcgcaagaacttaaagctgatctccttatcatgctcagtgatgtggaggggctctat 663 Query: 620 ag 621 || Sbjct: 664 ag 665
>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full insert sequence Length = 2739 Score = 488 bits (246), Expect = e-134 Identities = 513/602 (85%) Strand = Plus / Plus Query: 20 aacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgtcgtcaaggtcggc 79 |||| ||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||| Sbjct: 254 aacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcatcatcaaggtcggc 313 Query: 80 accgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggagctctctgc 139 ||||||||||| || |||| ||||||||| | || |||||||||||||| ||||| || Sbjct: 314 accgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtgctctgtgt 373 Query: 140 gagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgcc 199 || ||||||||| |||| ||||| ||||||| |||||||| ||||||||||| || || Sbjct: 374 gaacaggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgct 433 Query: 200 gttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacagcagctttgcggat 259 ||||| || ||||||||||||||||||||||||||||| |||| ||||| || || ||| Sbjct: 434 gttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatagcagtttcgctgat 493 Query: 260 ctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagtggc 319 ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 494 ctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagtgtg 553 Query: 320 ctcatggctatctacgatacgctgtttagccaacttgatgtgacatcgtctcagcttctt 379 || ||||| ||||| || ||| | |||||||| ||||| || ||||| |||||||||||| Sbjct: 554 ctgatggcgatctatgacacgttatttagccagcttgacgtaacatcatctcagcttctt 613 Query: 380 gtcaccgatcgcgatttccgggatccaagttttgggcaccagcttcgtgagactgtcgtc 439 || || ||||| ||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 614 gttacggatcgtgattttatggatccaagttttgggaaccagctccgcgagactgttaat 673 Query: 440 tctctgttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgagg 499 |||||||||||||| || || |||||||| ||||||||||| || || |||||||| ||| Sbjct: 674 tctctgttagatctcaaggttataccagtatttaatgagaatgacgccatcagtaccagg 733 Query: 500 agagcgccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctg 559 || ||||||||||||||||| || ||||||||||||||||| |||||||| | ||| Sbjct: 734 aggcaaccatacgaggattcatctggcatattctgggataacgatagtttggccagactg 793 Query: 560 ttggcaaaagaactggacgctgatcttcttatcatgcttagtgatgtggagggactctat 619 || || ||||||| | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 794 ttagcgcaagaacttaaagctgatctccttatcatgctcagtgatgtggaggggctctat 853 Query: 620 ag 621 || Sbjct: 854 ag 855
>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full insert sequence Length = 3386 Score = 480 bits (242), Expect = e-132 Identities = 512/602 (85%) Strand = Plus / Plus Query: 20 aacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgtcgtcaaggtcggc 79 |||| ||||||||||||| ||||||||| |||||| ||||||||| || ||||||||||| Sbjct: 198 aacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcatcatcaaggtcggc 257 Query: 80 accgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggagctctctgc 139 ||||||||||| || |||| || |||||| | || |||||||||||||| ||||| || Sbjct: 258 accgctgttgtgactgggccgattggccggttggctatgggcaggctcggtgctctgtgt 317 Query: 140 gagcaggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgcc 199 || ||||||||| |||| ||||| ||||||| |||||||| ||||||||||| || || Sbjct: 318 gaacaggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgct 377 Query: 200 gttggcgtcgggaggcagaggctcaagtaccggaagctaatcaacagcagctttgcggat 259 ||||| || ||||||||||||||||||||||||||||| |||| ||||| || || ||| Sbjct: 378 gttggtgttgggaggcagaggctcaagtaccggaagctcgtcaatagcagtttcgctgat 437 Query: 260 ctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagtggc 319 ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 438 ctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagtgtg 497 Query: 320 ctcatggctatctacgatacgctgtttagccaacttgatgtgacatcgtctcagcttctt 379 || ||||| ||||| || ||| | |||||||| ||||| || ||||| |||||||||||| Sbjct: 498 ctgatggcgatctatgacacgttatttagccagcttgacgtaacatcatctcagcttctt 557 Query: 380 gtcaccgatcgcgatttccgggatccaagttttgggcaccagcttcgtgagactgtcgtc 439 || || ||||| ||||| |||||||||||||||| ||||||| || |||||||| Sbjct: 558 gttacggatcgtgattttatggatccaagttttgggaaccagctccgcgagactgttaat 617 Query: 440 tctctgttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgagg 499 |||||||||||||| || || |||||||| ||||||||||| || || |||||||| ||| Sbjct: 618 tctctgttagatctcaaggttataccagtatttaatgagaatgacgccatcagtaccagg 677 Query: 500 agagcgccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctg 559 || ||||||||||||||||| || ||||||||||||||||| |||||||| | ||| Sbjct: 678 aggcaaccatacgaggattcatctggcatattctgggataacgatagtttggccagactg 737 Query: 560 ttggcaaaagaactggacgctgatcttcttatcatgcttagtgatgtggagggactctat 619 || || ||||||| | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 738 ttagcgcaagaacttaaagctgatctccttatcatgctcagtgatgtggaggggctctat 797 Query: 620 ag 621 || Sbjct: 798 ag 799
>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 Score = 163 bits (82), Expect = 9e-37 Identities = 208/250 (83%) Strand = Plus / Plus Query: 117 tgggcaggctcggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgagg 176 |||||||| | ||||| || ||||||||||| ||||| |||||| || || ||||||| Sbjct: 186 tgggcaggattggagccctgtgcgagcaggtcaaggatcttaatgctcaaggatatgagg 245 Query: 177 tgatcctggtcacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagc 236 |||| |||||||||| ||||| ||||| || ||| | ||| |||||| |||||| |||| Sbjct: 246 tgattatggtcacctcgggcgctgttggtgtggggcgacagcggctcaggtaccgcaagc 305 Query: 237 taatcaacagcagctttgcggatctgcagaacccacagttggacctggacgggaaggcct 296 | |||| ||||||||||| ||||||||||| |||||| |||| |||||||||||||||| Sbjct: 306 tcgtcaatagcagctttgctgatctgcagaagccacagatggagctggacgggaaggcct 365 Query: 297 gcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtttagccaacttg 356 ||||||| || || |||||||| || ||||| |||| || | | |||||| |||||||| Sbjct: 366 gcgctgctgttggtcagagtgggctgatggcactctatgacatgttgtttacccaacttg 425 Query: 357 atgtgacatc 366 ||||| |||| Sbjct: 426 atgtgtcatc 435 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 470 tttaatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtata 529 |||||||| || ||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 539 tttaatgaaaatgatgccatcagtacgaggaaggctccatacgaggattcatctggtata 598 Query: 530 ttctgggataacgacagtttggc 552 ||||||||||| ||||||||||| Sbjct: 599 ttctgggataatgacagtttggc 621
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2260 Score = 137 bits (69), Expect = 5e-29 Identities = 216/265 (81%) Strand = Plus / Plus Query: 117 tgggcaggctcggagctctctgcgagcaggtgaaggagcttaatttccaggggtatgagg 176 |||||||| | ||||| || ||||||||||| ||||| |||||| || || ||||||| Sbjct: 212 tgggcaggattggagccctgtgcgagcaggtcaaggatcttaatgctcaaggatatgagg 271 Query: 177 tgatcctggtcacctccggcgccgttggcgtcgggaggcagaggctcaagtaccggaagc 236 |||| |||||||||| ||||| || || || ||| | ||| |||||| ||||||||||| Sbjct: 272 tgattatggtcacctcgggcgctgtcggtgtggggcgacagcggctcaggtaccggaagc 331 Query: 237 taatcaacagcagctttgcggatctgcagaacccacagttggacctggacgggaaggcct 296 | |||| ||||||||||| |||||||| || |||||| |||| ||||| || ||||| | Sbjct: 332 ttgtcaatagcagctttgctgatctgcaaaagccacagatggagctggatggaaaggcgt 391 Query: 297 gcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtttagccaacttg 356 ||||||| || || |||||||| || ||||| |||| || | | |||||| |||||||| Sbjct: 392 gcgctgctgttggtcagagtgggctgatggcactctatgacatgttgtttacccaacttg 451 Query: 357 atgtgacatcgtctcagcttcttgt 381 ||||| |||| || || |||||||| Sbjct: 452 atgtgtcatcatcacaacttcttgt 476 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 470 tttaatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtata 529 |||||||| || ||||| ||||||||||||| || ||||||||||||||||| |||||| Sbjct: 565 tttaatgaaaatgatgccatcagtacgaggaaggctccatacgaggattcatctggtata 624 Query: 530 ttctgggataacgacagtttggc 552 ||||||||||| ||||||||||| Sbjct: 625 ttctgggataatgacagtttggc 647
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 353 cttgatgtgacatcgtctcagcttcttgtcaccgatcgcgatttccgggatccaagtttt 412 ||||| || ||||| |||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 36425757 cttgacgtaacatcatctcagcttcttgttacggatcgtgattttatggatccaagtttt 36425816 Query: 413 gggcaccagcttcgtgagactgtcgtctctctgttagatcttaaagtgataccagtgttt 472 ||| ||||||| || |||||||| |||||||||||||| || || |||||||| ||| Sbjct: 36425817 gggaaccagctccgcgagactgttaattctctgttagatctcaaggttataccagtattt 36425876 Query: 473 aatgagaacgatgctatcagtacgaggag 501 |||||||| || || |||||||| ||||| Sbjct: 36425877 aatgagaatgacgccatcagtaccaggag 36425905 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 257 gatctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagt 316 |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 36425574 gatctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagt 36425633 Query: 317 ggcctcatggctatctacgatacgctgtttagcca 351 | || ||||| ||||| || ||| | |||||||| Sbjct: 36425634 gtgctgatggcgatctatgacacgttatttagcca 36425668 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 143 caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 202 ||||||||| |||| ||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 36425380 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgctgtt 36425439 Query: 203 ggcgtcgggaggcagaggctcaagtaccggaagct 237 || || ||||||||||||||||||||||||||||| Sbjct: 36425440 ggtgttgggaggcagaggctcaagtaccggaagct 36425474 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 513 aggattcatccggtatattctgggataacgacagtttggcgacgctgttggcaaaagaac 572 |||||||||| || ||||||||||||||||| |||||||| | ||||| || |||||| Sbjct: 36426041 aggattcatctggcatattctgggataacgatagtttggccagactgttagcgcaagaac 36426100 Query: 573 tggacgctgatcttcttatcatgcttagtgatgtggagggactctatag 621 | | |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 36426101 ttaaagctgatctccttatcatgctcagtgatgtggaggggctctatag 36426149 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 72 aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 131 ||||||||||||||||||| || |||| ||||||||| | || |||||||||||||| | Sbjct: 36425210 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 36425269 Query: 132 ctct 135 |||| Sbjct: 36425270 ctct 36425273 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 20 aacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgtcgtcaaggt 75 |||| ||||||||||||| ||||||||| |||||| ||||||||| || ||||||| Sbjct: 36424489 aacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcatcatcaaggt 36424544
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 353 cttgatgtgacatcgtctcagcttcttgtcaccgatcgcgatttccgggatccaagtttt 412 ||||| || ||||| |||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 77596 cttgacgtaacatcatctcagcttcttgttacggatcgtgattttatggatccaagtttt 77655 Query: 413 gggcaccagcttcgtgagactgtcgtctctctgttagatcttaaagtgataccagtgttt 472 ||| ||||||| || |||||||| |||||||||||||| || || |||||||| ||| Sbjct: 77656 gggaaccagctccgcgagactgttaattctctgttagatctcaaggttataccagtattt 77715 Query: 473 aatgagaacgatgctatcagtacgaggag 501 |||||||| || || |||||||| ||||| Sbjct: 77716 aatgagaatgacgccatcagtaccaggag 77744 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 257 gatctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagt 316 |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 77413 gatctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagt 77472 Query: 317 ggcctcatggctatctacgatacgctgtttagcca 351 | || ||||| ||||| || ||| | |||||||| Sbjct: 77473 gtgctgatggcgatctatgacacgttatttagcca 77507 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 143 caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 202 ||||||||| |||| ||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 77219 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacctctggtgctgtt 77278 Query: 203 ggcgtcgggaggcagaggctcaagtaccggaagct 237 || || ||||||||||||||||||||||||||||| Sbjct: 77279 ggtgttgggaggcagaggctcaagtaccggaagct 77313 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 513 aggattcatccggtatattctgggataacgacagtttggcgacgctgttggcaaaagaac 572 |||||||||| || ||||||||||||||||| |||||||| | ||||| || |||||| Sbjct: 77880 aggattcatctggcatattctgggataacgatagtttggccagactgttagcgcaagaac 77939 Query: 573 tggacgctgatcttcttatcatgcttagtgatgtggagggactctatag 621 | | |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 77940 ttaaagctgatctccttatcatgctcagtgatgtggaggggctctatag 77988 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 72 aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 131 ||||||||||||||||||| || |||| ||||||||| | || |||||||||||||| | Sbjct: 77049 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 77108 Query: 132 ctct 135 |||| Sbjct: 77109 ctct 77112 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 20 aacagcgactccacccgctgcttcgtcagggacgtcaagcgcatcgtcgtcaaggt 75 |||| ||||||||||||| ||||||||| |||||| ||||||||| || ||||||| Sbjct: 76328 aacaccgactccacccgcggcttcgtcaaggacgtgaagcgcatcatcatcaaggt 76383
>dbj|AK064210.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-E10, full insert sequence Length = 2521 Score = 105 bits (53), Expect = 2e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 353 cttgatgtgacatcgtctcagcttcttgtcaccgatcgcgatttccgggatccaagtttt 412 ||||| || ||||| |||||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 1783 cttgacgtaacatcatctcagcttcttgttacggatcgtgattttatggatccaagtttt 1724 Query: 413 gggcaccagcttcgtgagactgtcgtctctctgttagatcttaaagtgataccagtgttt 472 ||| ||||||| || |||||||| |||||||||||||| || || |||||||| ||| Sbjct: 1723 gggaaccagctccgcgagactgttaattctctgttagatctcaaggttataccagtattt 1664 Query: 473 aatgagaacgatgctatcagtacgaggag 501 |||||||| || || |||||||| ||||| Sbjct: 1663 aatgagaatgacgccatcagtaccaggag 1635 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 257 gatctgcagaacccacagttggacctggacgggaaggcctgcgctgccgtcggccagagt 316 |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 1966 gatctgcagaacccacagatggacatggacgggaaggcctgcgctgccgtcggtcagagt 1907 Query: 317 ggcctcatggctatctacgatacgctgtttagcca 351 | || ||||| ||||| || ||| | |||||||| Sbjct: 1906 gtgctgatggcgatctatgacacgttatttagcca 1872 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 513 aggattcatccggtatattctgggataacgacagtttggcgacgctgttggcaaaagaac 572 |||||||||| || ||||||||||||||||| |||||||| | ||||| || |||||| Sbjct: 1499 aggattcatctggcatattctgggataacgatagtttggccagactgttagcgcaagaac 1440 Query: 573 tggacgctgatcttcttatcatgcttagtgatgtggagggactctatag 621 | | |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 1439 ttaaagctgatctccttatcatgctcagtgatgtggaggggctctatag 1391 Score = 95.6 bits (48), Expect = 2e-16 Identities = 93/107 (86%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 143 caggtgaaggagcttaatttccaggggtatgaggtgatcctggtcacctccggcgccgtt 202 ||||||||| |||| ||||| ||||||| |||||||| |||||||||| || || ||| Sbjct: 2158 caggtgaagcagctaaattttgaggggtacgaggtgattctggtcacct--ggtgctgtt 2101 Query: 203 ggcgtcgggaggcagaggctcaagtaccggaagctaatcaacagcag 249 || || ||||||||||||||||||||||||||||| |||||||||| Sbjct: 2100 ggtgttgggaggcagaggctcaagtaccggaagctcgtcaacagcag 2054 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 72 aggtcggcaccgctgttgtcaccgggcagaatggccgactcgccatgggcaggctcggag 131 ||||||||||||||||||| || |||| ||||||||| | || |||||||||||||| | Sbjct: 2328 aggtcggcaccgctgttgtgactgggccgaatggccggttggctatgggcaggctcggtg 2269 Query: 132 ctct 135 |||| Sbjct: 2268 ctct 2265
>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full insert sequence Length = 2767 Score = 95.6 bits (48), Expect = 2e-16 Identities = 135/164 (82%) Strand = Plus / Plus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgaggagagcg 505 |||||||||||||| |||||| | |||||||| || ||||| ||||| || || | || Sbjct: 551 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcagcactagaaaggct 610 Query: 506 ccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctgttggca 565 ||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 611 ccatatgaggattcatctggtatattctgggataatgacagtttagcaggactgttggca 670 Query: 566 aaagaactggacgctgatcttcttatcatgcttagtgatgtgga 609 |||||| | |||||||| ||||| |||| ||||||||||| Sbjct: 671 ctggaactgaaagctgatctccttattctgctcagtgatgtgga 714 Score = 75.8 bits (38), Expect = 2e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 226 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctgga 285 |||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 331 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttaga 390 Query: 286 cgggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtt 345 || ||||| || || || || || |||||||| || |||||| | ||||||| | |||| Sbjct: 391 tggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgtt 450 Query: 346 tagccaacttgatgtgacatcgtctcagcttcttgtcaccga 387 || |||||| ||||| | || ||||| |||||||||||||| Sbjct: 451 taaccaactggatgtctcgtcatctcaacttcttgtcaccga 492
>dbj|AK101985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033078N24, full insert sequence Length = 1821 Score = 95.6 bits (48), Expect = 2e-16 Identities = 135/164 (82%) Strand = Plus / Plus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgaggagagcg 505 |||||||||||||| |||||| | |||||||| || ||||| ||||| || || | || Sbjct: 551 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcagcactagaaaggct 610 Query: 506 ccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctgttggca 565 ||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 611 ccatatgaggattcatctggtatattctgggataatgacagtttagcaggactgttggca 670 Query: 566 aaagaactggacgctgatcttcttatcatgcttagtgatgtgga 609 |||||| | |||||||| ||||| |||| ||||||||||| Sbjct: 671 ctggaactgaaagctgatctccttattctgctcagtgatgtgga 714 Score = 75.8 bits (38), Expect = 2e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 226 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctgga 285 |||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 331 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttaga 390 Query: 286 cgggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtt 345 || ||||| || || || || || |||||||| || |||||| | ||||||| | |||| Sbjct: 391 tggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgtt 450 Query: 346 tagccaacttgatgtgacatcgtctcagcttcttgtcaccga 387 || |||||| ||||| | || ||||| |||||||||||||| Sbjct: 451 taaccaactggatgtctcgtcatctcaacttcttgtcaccga 492
>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase, complete cds Length = 2549 Score = 95.6 bits (48), Expect = 2e-16 Identities = 135/164 (82%) Strand = Plus / Plus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgaggagagcg 505 |||||||||||||| |||||| | |||||||| || ||||| ||||| || || | || Sbjct: 531 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcagcactagaaaggct 590 Query: 506 ccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctgttggca 565 ||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 591 ccatatgaggattcatctggtatattctgggataatgacagtttagcaggactgttggca 650 Query: 566 aaagaactggacgctgatcttcttatcatgcttagtgatgtgga 609 |||||| | |||||||| ||||| |||| ||||||||||| Sbjct: 651 ctggaactgaaagctgatctccttattctgctcagtgatgtgga 694 Score = 75.8 bits (38), Expect = 2e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 226 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctgga 285 |||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 311 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttaga 370 Query: 286 cgggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtt 345 || ||||| || || || || || |||||||| || |||||| | ||||||| | |||| Sbjct: 371 tggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgtt 430 Query: 346 tagccaacttgatgtgacatcgtctcagcttcttgtcaccga 387 || |||||| ||||| | || ||||| |||||||||||||| Sbjct: 431 taaccaactggatgtctcgtcatctcaacttcttgtcaccga 472
>gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2151 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgaggagagcg 505 |||||||||||||| |||||| | |||||||| || ||||| ||||| || || | || Sbjct: 433 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcagcactagaaaggct 492 Query: 506 ccatacgaggattcatccggtatattctgggataacgacagtttggcgacgctgttggca 565 ||||| ||||||||||| ||||||| ||||||||| |||||||| || ||||||||| Sbjct: 493 ccatatgaggattcatctggtatatcctgggataatgacagtttagcaggactgttggca 552 Query: 566 aaagaactggacgctgatcttcttatcatgcttagtgatgtgga 609 |||||| | |||||||| ||||| |||| ||||||||||| Sbjct: 553 ctggaactgaaagctgatctccttattctgctcagtgatgtgga 596 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Plus Query: 227 taccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctggac 286 ||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 214 taccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttagat 273 Query: 287 gggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgttt 346 || ||||| || || || || || |||||||| || |||||| | ||||||| | ||||| Sbjct: 274 ggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgttt 333 Query: 347 agccaacttgatgtgacatcgtctcagcttcttgtcaccga 387 | |||||| ||||| | || ||||| |||||||||||||| Sbjct: 334 aaccaactggatgtctcgtcatctcaacttcttgtcaccga 374 Score = 46.1 bits (23), Expect = 0.14 Identities = 92/115 (80%) Strand = Plus / Plus Query: 39 gcttcgtcagggacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgtcaccgggc 98 ||||||| |||||||| |||||| || || ||||||| ||||| || |||||| || | | Sbjct: 26 gcttcgtgagggacgtgaagcgcgtcatcatcaaggtgggcactgcagttgtctccagac 85 Query: 99 agaatggccgactcgccatgggcaggctcggagctctctgcgagcaggtgaagga 153 | |||| || | || |||||||| | |||||||| ||||||||||| ||||| Sbjct: 86 aagatggaagattggctttgggcagggttggagctctgtgcgagcaggttaagga 140
>gb|M92276.1|VIRPYRR Vigna aconitifolia pyrroline-5-carboxylate synthetase associated mRNA sequence Length = 2417 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 237 taatcaacagcagctttgcggatctgcagaacccacagttggacctggacgggaaggcct 296 |||||||||||||||| || || || ||||| || || | || || ||||| ||||||| Sbjct: 263 taatcaacagcagcttcgccgaccttcagaaaccccaactcgaactcgacggcaaggcct 322 Query: 297 gcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtttagccaacttg 356 |||| ||||| || |||| | ||||||||| |||||||||||||||| | || || | Sbjct: 323 gcgccgccgttggacagaacagtctcatggctctctacgatacgctgttcactcagctcg 382 Query: 357 atgtgacatcgtctcagcttcttgt 381 ||||||||||| ||||||||||||| Sbjct: 383 atgtgacatcggctcagcttcttgt 407 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 467 gtgtttaatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggt 526 ||||| |||||||||||||| | ||||| |||| || || || |||||||| || ||| Sbjct: 493 gtgttcaatgagaacgatgccgttagtaccaggaaggctccctatgaggattcttctggt 552 Query: 527 atattctgggataacgacagttt 549 ||||| |||||||| || ||||| Sbjct: 553 atattttgggataatgatagttt 575
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2992 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 444 tgttagatcttaaagtgataccagtgtttaatgagaacgatgctatcagtacgaggagag 503 |||| ||||| ||||| |||| ||||| ||||| || ||||| | ||||| |||| || Sbjct: 616 tgttggatctaaaagttgtacctgtgttaaatgaaaatgatgcagtaagtaccaggaaag 675 Query: 504 cgccatacgaggattcatccggtatattctgggataacgacagttt 549 | || || ||||||||||||||||||||||||||||| || ||||| Sbjct: 676 ccccttatgaggattcatccggtatattctgggataatgatagttt 721 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 49 ggacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgt 90 |||||| |||||| ||||||||||||| || || |||||||| Sbjct: 221 ggacgttaagcgcgtcgtcgtcaaggttggaactgctgttgt 262
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 513 aggattcatccggtatattctgggataacgacagtttggcgacgctgttggcaaaagaac 572 |||||||||| ||||||||||||||||| |||||||| || ||||||||| |||| Sbjct: 77154 aggattcatctggtatattctgggataatgacagtttagcaggactgttggcactggaac 77095 Query: 573 tggacgctgatcttcttatcatgcttagtgatgtgga 609 || | |||||||| ||||| |||| ||||||||||| Sbjct: 77094 tgaaagctgatctccttattctgctcagtgatgtgga 77058 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 226 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctgga 285 |||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 77715 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttaga 77656 Query: 286 cgggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtt 345 || ||||| || || || || || |||||||| || |||||| | ||||||| | |||| Sbjct: 77655 tggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgtt 77596 Query: 346 tagccaa 352 || |||| Sbjct: 77595 taaccaa 77589 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcag 492 |||||||||||||| |||||| | |||||||| || ||||| ||||| Sbjct: 77405 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcag 77359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 513 aggattcatccggtatattctgggataacgacagtttggcgacgctgttggcaaaagaac 572 |||||||||| ||||||||||||||||| |||||||| || ||||||||| |||| Sbjct: 22233889 aggattcatctggtatattctgggataatgacagtttagcaggactgttggcactggaac 22233830 Query: 573 tggacgctgatcttcttatcatgcttagtgatgtgga 609 || | |||||||| ||||| |||| ||||||||||| Sbjct: 22233829 tgaaagctgatctccttattctgctcagtgatgtgga 22233793 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 226 gtaccggaagctaatcaacagcagctttgcggatctgcagaacccacagttggacctgga 285 |||||||||||| |||| ||||||||||| |||||||| || |||||| |||| | || Sbjct: 22234450 gtaccggaagcttgtcaatagcagctttgctgatctgcaaaagccacagatggagttaga 22234391 Query: 286 cgggaaggcctgcgctgccgtcggccagagtggcctcatggctatctacgatacgctgtt 345 || ||||| || || || || || |||||||| || |||||| | ||||||| | |||| Sbjct: 22234390 tggaaaggcttgtgccgctgttggtcagagtggactgatggctctttacgatatgttgtt 22234331 Query: 346 tagccaa 352 || |||| Sbjct: 22234330 taaccaa 22234324 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 446 ttagatcttaaagtgataccagtgtttaatgagaacgatgctatcag 492 |||||||||||||| |||||| | |||||||| || ||||| ||||| Sbjct: 22234140 ttagatcttaaagttataccaatatttaatgaaaatgatgccatcag 22234094
>gb|U60267.1|SLU60267 Solanum lycopersicum delta 1-pyrroline-5-carboxylate synthetase (tomPRO2) mRNA, complete cds Length = 2239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| ||||||||||||||| ||||||| || || ||||| || || || ||||| Sbjct: 503 aatgagaatgatgctatcagtacgcggagagctccttatgaggactcttctggaatattt 562 Query: 533 tgggataacgacagtttggc 552 |||||||| |||||| |||| Sbjct: 563 tgggataatgacagtctggc 582
>dbj|AB056452.2| Vigna unguiculata VuP5CS mRNA, complete cds Length = 2791 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 ||||| || |||||| | ||||| |||| ||| |||||||||||||| || ||||| ||| Sbjct: 625 aatgaaaatgatgctgttagtactaggaaagcaccatacgaggattcttctggtattttc 684 Query: 533 tgggataacgacagtttggc 552 ||||| || ||||||||||| Sbjct: 685 tgggacaatgacagtttggc 704 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 320 ctcatggctatctacgatacgctgtttagccaacttgatgtgacatcgtctcagcttctt 379 ||||||||| |||| ||||| |||| ||||| ||||||||||| || || || |||||| Sbjct: 472 ctcatggctctctatgataccatgttcagccagcttgatgtgacttcttcccaacttctt 531 Query: 380 gt 381 || Sbjct: 532 gt 533
>emb|X98421.1|MSP5CS1 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-1 Length = 2603 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 476 gagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattctgg 535 |||||||| || ||||||| |||| ||| |||||||||||||| || || ||||| ||| Sbjct: 517 gagaacgacgcagtcagtactaggaaagctccatacgaggattcttctggcatattttgg 576 Query: 536 gataacgacagttt 549 ||||| |||||||| Sbjct: 577 gataatgacagttt 590 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 342 tgtttagccaacttgatgtgacatcgtctcagcttcttgt 381 ||||||| || || ||||||||||| ||||||||||||| Sbjct: 383 tgtttagtcagctggatgtgacatctgctcagcttcttgt 422
>gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxylase synthetase mRNA, complete cds Length = 2181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 460 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtatcttc 519 Query: 533 tgggataacgacagtttggc 552 |||||||||||||| ||||| Sbjct: 520 tgggataacgacagcttggc 539 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
>gb|U92286.1|ADU92286 Actinidia deliciosa pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2378 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 470 tttaatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtata 529 |||||||| || |||||| |||| || |||| ||| ||||| ||||| | || |||||| Sbjct: 465 tttaatgaaaatgatgctgtcagcaccaggaaagctccatatgaggacgcttctggtata 524 Query: 530 ttctgggataacgacagttt 549 ||||||||||| |||||||| Sbjct: 525 ttctgggataatgacagttt 544
>gb|DQ226946.1| Boechera divaricarpa isolate AD-C9 mRNA sequence Length = 578 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 101 aatgagaatgatgctataagcacccgaagagccccatatcaggattcttctggtattttc 42 Query: 533 tgggataacgacag 546 |||||||||||||| Sbjct: 41 tgggataacgacag 28 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 334 tcaatagcagctttgcggatctccagaa 307
>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2148 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 476 gagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattctgg 535 ||||||||||| | ||||| |||| ||| ||||| |||||||| || || ||||| ||| Sbjct: 463 gagaacgatgcagttagtactaggaaagctccatatgaggattcttctggcatattttgg 522 Query: 536 gataacgacagttt 549 ||||| |||||||| Sbjct: 523 gataatgacagttt 536 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 578 gctgatcttcttatcatgcttagtgatgtggagggactctatagt 622 |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 565 gctgatcttcttattttgttgagtgatgtagagggtctctatagt 609 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 342 tgtttagccaacttgatgtgacatcgtctcagcttcttgt 381 ||||||| || || ||||||||||| ||||||||||||| Sbjct: 329 tgtttagtcagctggatgtgacatctgctcagcttcttgt 368
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA, complete cds Length = 2551 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 ||||||||||||||||| || || || ||||| || || |||||||||| || || || Sbjct: 553 aatgagaacgatgctattagcaccagaagagctccttatcaggattcatctggcatcttt 612 Query: 533 tgggataacgacag 546 |||||||||||||| Sbjct: 613 tgggataacgacag 626 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 50 gacgtcaagcgcatcgtcgtcaaggtcggcaccgctgttgt 90 ||||||||||| |||||||| ||||| || || |||||||| Sbjct: 130 gacgtcaagcgtatcgtcgttaaggttggaacagctgttgt 170 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 320 tcaatagcagctttgcggatctccagaa 347
>ref|NM_201912.1| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.2 mRNA, complete cds Length = 2519 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 476 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 535 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 536 tgggataacga 546
>ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.1 mRNA, complete cds Length = 2886 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 840 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 899 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 900 tgggataacga 910 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 607 tcaatagcagctttgcggatcttcagaa 634
>gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxylase synthetase (P5C1) (At2g39800) mRNA, complete cds Length = 2185 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 460 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 519 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 520 tgggataacga 530 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
>emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxylate synthetase Length = 2584 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 558 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 617 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 618 tgggataacga 628 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 325 tcaatagcagctttgcggatcttcagaa 352
>emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxylate synthetase A Length = 2552 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 532 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 591 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 592 tgggataacga 602 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 299 tcaatagcagctttgcggatcttcagaa 326
>gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5-carboxylase synthetase P5C1 (At2g39800) mRNA, complete cds Length = 2600 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 579 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 638 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 639 tgggataacga 649 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 346 tcaatagcagctttgcggatcttcagaa 373
>gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2154 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 460 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 519 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 520 tgggataacga 530 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 227 tcaatagcagctttgcggatcttcagaa 254
>gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2630 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 579 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 638 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 639 tgggataacga 649 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 346 tcaatagcagctttgcggatcttcagaa 373
>dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrroline-5-carboxylate synthase, complete cds Length = 2571 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 473 aatgagaacgatgctatcagtacgaggagagcgccatacgaggattcatccggtatattc 532 |||||||| |||||||| || || | ||||| ||||| ||||||| || ||||| ||| Sbjct: 566 aatgagaatgatgctattagcacccgaagagccccatatcaggattcttctggtattttc 625 Query: 533 tgggataacga 543 ||||||||||| Sbjct: 626 tgggataacga 636 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 tcaacagcagctttgcggatctgcagaa 267 |||| ||||||||||||||||| ||||| Sbjct: 333 tcaatagcagctttgcggatcttcagaa 360
>dbj|AK111149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F01, full insert sequence Length = 2737 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 agcgcatcgtcgtcaaggtcggc 79 ||||||||||||||||||||||| Sbjct: 1381 agcgcatcgtcgtcaaggtcggc 1403
>emb|AL591496.13| Mouse DNA sequence from clone RP23-384C18 on chromosome 11 Contains the 3' end of a novel gene, five novel genes, the Serpinf1 and Serpinf2 genes for serine (or cysteine) proteinase inhibitor, clade F) members 1 and 2, an H+ transporting mitochondrial F0 complex ATP synthase subunit c (subunit 9) isoform 1 (Atp5g1) pseudogene, the Prpf8 gene for pre-mRNA processing factor 8, the gene for the ortholog of human scavenger receptor class F member 1 SCARF1, the 5' end of the gene for novel protein similar to solute carrier family 43 member 1 Slc43a1 and seven CpG islands, complete sequence Length = 205633 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 138406 gcgactccacccgctgcttcgt 138385
>emb|AJ005686.1|VVI5686 Vitis vinifera mRNA for pyrroline-5-carboxylate synthetase (delta 1 type) Length = 2374 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 344 tttagccaacttgatgtgacatcgtctcagcttcttgt 381 |||||||| || ||||||||||| ||||||||||||| Sbjct: 384 tttagccagctggatgtgacatcagctcagcttcttgt 421
>gb|AC002121.1| Genomic sequence from Mouse 11, complete sequence Length = 84056 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 62144 gcgactccacccgctgcttcgt 62165
>ref|NM_138659.1| Mus musculus pre-mRNA processing factor 8 (Prpf8), mRNA Length = 7143 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 2079 gcgactccacccgctgcttcgt 2058
>dbj|AK144232.1| Mus musculus nullipotent stem cell CRL-2070 NE cDNA, RIKEN full-length enriched library, clone:G430136B12 product:pre-mRNA processing factor 8, full insert sequence Length = 3278 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 2113 gcgactccacccgctgcttcgt 2092
>dbj|AK041017.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530061L10 product:splicing factor PRP8-like (S. cerevisiae), full insert sequence Length = 2398 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 2120 gcgactccacccgctgcttcgt 2099
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 59 cgcatcgtcgtcaaggtcggcaccgc 84 ||||||||||||||||||||| |||| Sbjct: 461634 cgcatcgtcgtcaaggtcggctccgc 461659
>gb|AF101424.1|AF101424 Cichorium intybus pyrroline-5-carboxylate synthetase mRNA, partial cds Length = 570 Score = 44.1 bits (22), Expect = 0.54 Identities = 36/41 (87%) Strand = Plus / Plus Query: 506 ccatacgaggattcatccggtatattctgggataacgacag 546 |||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 475 ccatacgangattcttccggaatcttctgggataatgacag 515
>dbj|AB047391.1| Mus musculus Prp8 mRNA for pre-mRNA processing 8 protein, complete cds Length = 7143 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 gcgactccacccgctgcttcgt 45 |||||||||||||||||||||| Sbjct: 2079 gcgactccacccgctgcttcgt 2058
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 atcgtcgtcaaggtcggcacc 82 ||||||||||||||||||||| Sbjct: 1662694 atcgtcgtcaaggtcggcacc 1662714
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 Length = 207355 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 ctttgcggatctgcagaaccc 270 ||||||||||||||||||||| Sbjct: 204758 ctttgcggatctgcagaaccc 204778
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 gtcaagcgcatcgtcgtcaag 73 ||||||||||||||||||||| Sbjct: 907417 gtcaagcgcatcgtcgtcaag 907397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aggtcggcaccgctgttgtc 91 |||||||||||||||||||| Sbjct: 3700574 aggtcggcaccgctgttgtc 3700555
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgcatcgtcgtcaaggtcggc 79 ||||||||||||||||||||| Sbjct: 174987 cgcatcgtcgtcaaggtcggc 175007
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 cgcatcgtcgtcaaggtcggc 79 ||||||||||||||||||||| Sbjct: 285145 cgcatcgtcgtcaaggtcggc 285165
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 gcgcatcgtcgtcaaggtcgg 78 ||||||||||||||||||||| Sbjct: 1175885 gcgcatcgtcgtcaaggtcgg 1175905
>gb|AY986977.1| Xanthomonas campestris pv. pelargonii phage Xp15, complete genome Length = 55770 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 acgtcaagcgcatcgtcgtca 71 ||||||||||||||||||||| Sbjct: 50065 acgtcaagcgcatcgtcgtca 50085
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 gcgcatcgtcgtcaaggtcggcacc 82 ||||||||||| ||||||||||||| Sbjct: 22138 gcgcatcgtcgacaaggtcggcacc 22114
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 173 gaggtgatcctggtcacctccggcgccgt 201 |||||||| |||||| ||||||||||||| Sbjct: 1570608 gaggtgattctggtctcctccggcgccgt 1570636
>ref|XM_586913.2| PREDICTED: Bos taurus similar to Hypothetical UPF0172 protein CG3501 (LOC509858), mRNA Length = 1075 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 849 cttagtgatgtggagggact 868
>gb|AC129189.3| Mus musculus BAC clone RP24-67O22 from chromosome 15, complete sequence Length = 152947 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 atttccaggggtatgaggtg 178 |||||||||||||||||||| Sbjct: 87954 atttccaggggtatgaggtg 87935
>ref|NM_016049.3| Homo sapiens chromosome 14 open reading frame 122 (C14orf122), mRNA Length = 896 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 601 cttagtgatgtggagggact 620
>ref|XM_537381.2| PREDICTED: Canis familiaris similar to Hypothetical UPF0172 protein CG3501 (LOC480257), mRNA Length = 1019 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 801 cttagtgatgtggagggact 820
>gb|AY368908.1| Homo sapiens CGI-112 protein mRNA, complete cds Length = 753 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 546 cttagtgatgtggagggact 565
>emb|AL929495.21| Zebrafish DNA sequence from clone CH211-136M16 in linkage group 12, complete sequence Length = 157568 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aagctaatcaacagcagctt 252 |||||||||||||||||||| Sbjct: 33293 aagctaatcaacagcagctt 33274
>gb|AC101771.11| Mus musculus chromosome 15, clone RP24-104H19, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 atttccaggggtatgaggtg 178 |||||||||||||||||||| Sbjct: 47604 atttccaggggtatgaggtg 47585
>gb|AC151734.3| Mus musculus BAC clone RP23-22O15 from chromosome 15, complete sequence Length = 229862 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 atttccaggggtatgaggtg 178 |||||||||||||||||||| Sbjct: 204820 atttccaggggtatgaggtg 204801
>gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190723 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tcgggaggcagaggctcaag 226 |||||||||||||||||||| Sbjct: 7070 tcgggaggcagaggctcaag 7089
>gb|AC009597.5|AC009597 Homo sapiens chromosome 8, clone RP11-33E15, complete sequence Length = 169479 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 tgagactgtcgtctctctgttaga 450 ||||||||| |||||||||||||| Sbjct: 161227 tgagactgttgtctctctgttaga 161250
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ctgtcgtctctctgttagat 451 |||||||||||||||||||| Sbjct: 14791851 ctgtcgtctctctgttagat 14791832
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 agcttaatttccaggggtat 172 |||||||||||||||||||| Sbjct: 2254985 agcttaatttccaggggtat 2255004
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atggccgactcgccatgggc 121 |||||||||||||||||||| Sbjct: 331082 atggccgactcgccatgggc 331101
>gb|AC098582.2| Homo sapiens BAC clone RP11-2I7 from 4, complete sequence Length = 103551 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 gctgttggcaaaagaactgg 575 |||||||||||||||||||| Sbjct: 29961 gctgttggcaaaagaactgg 29942
>gb|AY186788.1| Rice stripe virus isolate HZ segment 1 gene, complete sequence Length = 8970 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 ttcttatcatgcttagtgat 604 |||||||||||||||||||| Sbjct: 6959 ttcttatcatgcttagtgat 6940
>gb|AF151870.1|AF151870 Homo sapiens CGI-112 protein mRNA, complete cds Length = 841 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 596 cttagtgatgtggagggact 615
>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0030G18 Length = 167557 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ctgtcgtctctctgttagat 451 |||||||||||||||||||| Sbjct: 83938 ctgtcgtctctctgttagat 83919
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 agcttaatttccaggggtat 172 |||||||||||||||||||| Sbjct: 41934 agcttaatttccaggggtat 41953
>gb|BC002491.2| Homo sapiens chromosome 14 open reading frame 122, mRNA (cDNA clone MGC:720 IMAGE:3051105), complete cds Length = 896 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 cttagtgatgtggagggact 615 |||||||||||||||||||| Sbjct: 601 cttagtgatgtggagggact 620
>dbj|D31879.1|RCSRNAP Rice stripe virus gene for RNA polymerase, complete cds Length = 8970 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 ttcttatcatgcttagtgat 604 |||||||||||||||||||| Sbjct: 6959 ttcttatcatgcttagtgat 6940
>dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11J24, TM0185, complete sequence Length = 121047 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 513 aggattcatccggtatattctgggataacgacagtttggc 552 ||||||| || || |||||||||||||| ||||| ||||| Sbjct: 59743 aggattcttctggaatattctgggataatgacagcttggc 59782
>gb|AC124696.5| Mus musculus BAC clone RP24-173I13 from chromosome 16, complete sequence Length = 187655 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gataccagtgtttaatgaga 479 |||||||||||||||||||| Sbjct: 80081 gataccagtgtttaatgaga 80100 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,179,177 Number of Sequences: 3902068 Number of extensions: 4179177 Number of successful extensions: 114386 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113673 Number of HSP's gapped (non-prelim): 693 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
