| Clone Name | baal21g10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 303 bits (153), Expect = 1e-79 Identities = 172/176 (97%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 584 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccccggtggtctgtggtt 640 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 700 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggccg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggccg 756
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 256 bits (129), Expect = 2e-65 Identities = 166/176 (94%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 540 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccccggtggtctgtggtt 596 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||| Sbjct: 597 tgacccactcggctacggcaacggctcgccagagaagcttaaggagctgcgcaccaagga 656 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggccg 188 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 657 gatcaagaatggccgcctcgccatgctcgccgtcatgggcgcgtggttccaggccg 712
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 554 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 610 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 611 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 670 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 671 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 724
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 555 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 611 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 612 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 671 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 672 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 725
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 557 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 613 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 614 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 673 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 674 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 727
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 560 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 616 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 617 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 676 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 677 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 730
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 560 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 616 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 617 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 676 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 677 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 730
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 561 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 617 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 618 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 677 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 678 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 731
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 561 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 617 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 618 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 677 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 678 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 731
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 564 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 620 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 621 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 680 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 681 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 734
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 575 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 631 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 632 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 691 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 692 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 745
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 561 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 617 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 618 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 677 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 678 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 731
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 561 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 617 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 618 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 677 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 678 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 731
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 591 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 647 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 648 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 707 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 708 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 761
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 557 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 613 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 614 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 673 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 674 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 727
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 560 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 616 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 617 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 676 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 677 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 730
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 554 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 610 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 611 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 670 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 671 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 724
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 555 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 611 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 612 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 671 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 672 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 725
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 220 bits (111), Expect = 1e-54 Identities = 160/174 (91%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggtaccccggtggtctgtggtt 72 |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| Sbjct: 564 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggtaccctggtggtctgtggtt 620 Query: 73 tgacccgctcggctacggcaccggctcgcccgagaagctcaaggagctgcgcaccaagga 132 |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 621 tgacccgctcggctggggcaccggctcgccggagaagatcaaggagctgcgcaccaagga 680 Query: 133 gatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggttccaggc 186 |||||||||||| || || |||||||||||||||||||| || ||||||||||| Sbjct: 681 gatcaagaacgggcggctcgccatgctcgccgtcatgggagcttggttccaggc 734
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 210 bits (106), Expect = 1e-51 Identities = 139/150 (92%) Strand = Plus / Plus Query: 39 gcaccgacgtcgggtaccccggtggtctgtggtttgacccgctcggctacggcaccggct 98 ||||||||||||||||||| ||||| || ||||||||||||||||||| ||| |||||| Sbjct: 730 gcaccgacgtcgggtaccctggtggcctctggtttgacccgctcggctggggctccggct 789 Query: 99 cgcccgagaagctcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgc 158 |||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 790 cgccggagaagatcaaggagctgcgcaccaaggagatcaagaacggacgcctcgccatgc 849 Query: 159 tcgccgtcatgggcgcgtggttccaggccg 188 |||||||||||||||| ||||||||||||| Sbjct: 850 tcgccgtcatgggcgcctggttccaggccg 879
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 190 bits (96), Expect = 1e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 51 ggtaccccggtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaagc 110 ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 23305103 ggtaccctggtggtctgtggtttgacccgctcggctggggcaccggctcgccggagaaga 23305162 Query: 111 tcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgg 170 |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 23305163 tcaaggagctgcgcaccaaggagatcaagaacgggcggctcgccatgctcgccgtcatgg 23305222 Query: 171 gcgcgtggttccaggc 186 | || ||||||||||| Sbjct: 23305223 gagcttggttccaggc 23305238 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 22434707 caaggagatcaagaatggccgcctcgccatg 22434737 Score = 38.2 bits (19), Expect = 9.3 Identities = 38/42 (90%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggta 54 |||||||||||||||| |||||| |||||||||||||||| Sbjct: 23304959 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggta 23304997
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 190 bits (96), Expect = 1e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 51 ggtaccccggtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaagc 110 ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 60361 ggtaccctggtggtctgtggtttgacccgctcggctggggcaccggctcgccggagaaga 60420 Query: 111 tcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgg 170 |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 60421 tcaaggagctgcgcaccaaggagatcaagaacgggcggctcgccatgctcgccgtcatgg 60480 Query: 171 gcgcgtggttccaggc 186 | || ||||||||||| Sbjct: 60481 gagcttggttccaggc 60496 Score = 38.2 bits (19), Expect = 9.3 Identities = 38/42 (90%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggta 54 |||||||||||||||| |||||| |||||||||||||||| Sbjct: 60217 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggta 60255
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 190 bits (96), Expect = 1e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 51 ggtaccccggtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaagc 110 ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 886 ggtaccctggtggtctgtggtttgacccgctcggctggggcaccggctcgccggagaaga 945 Query: 111 tcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgg 170 |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 946 tcaaggagctgcgcaccaaggagatcaagaacgggcggctcgccatgctcgccgtcatgg 1005 Query: 171 gcgcgtggttccaggc 186 | || ||||||||||| Sbjct: 1006 gagcttggttccaggc 1021 Score = 38.2 bits (19), Expect = 9.3 Identities = 38/42 (90%), Gaps = 3/42 (7%) Strand = Plus / Plus Query: 13 cttccccaacaacaaggctcaccantgcaccgacgtcgggta 54 |||||||||||||||| |||||| |||||||||||||||| Sbjct: 742 cttccccaacaacaag-ctcaccg--gcaccgacgtcgggta 780
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 141 bits (71), Expect = 9e-31 Identities = 113/127 (88%) Strand = Plus / Plus Query: 60 gtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaagctcaaggagc 119 ||||| ||||||| ||||||||||||| ||||||| ||| || |||||| ||||||||| Sbjct: 578 gtggtttgtggttagacccgctcggctggggcaccgtctccccggagaagatcaaggagc 637 Query: 120 tgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtggt 179 ||||||||||||||||||||||||| || | |||||||||||||||||||| || |||| Sbjct: 638 tgcgcaccaaggagatcaagaacgggcgggtcgccatgctcgccgtcatgggagcttggt 697 Query: 180 tccaggc 186 ||||||| Sbjct: 698 tccaggc 704
>dbj|AB122116.1| Chlamydomonas reinhardtii LhcI-3 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1830 Score = 73.8 bits (37), Expect = 2e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 113 aaggagctgcgcaccaaggagatcaagaacggccgcctggccatg 157 |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1227 aaggagctgcagaccaaggagatcaagaacggccgcctggccatg 1271
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 69.9 bits (35), Expect = 3e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 118 gctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtg 177 ||||||||||||||||||||||||||| || || |||||||||||| || | ||| || Sbjct: 305 gctgcgcaccaaggagatcaagaacgggcggctcgccatgctcgccttcgtcggcttctg 364 Query: 178 gttccaggccg 188 ||||||||||| Sbjct: 365 gttccaggccg 375 Score = 38.2 bits (19), Expect = 9.3 Identities = 28/31 (90%) Strand = Plus / Plus Query: 42 ccgacgtcgggtaccccggtggtctgtggtt 72 ||||||| ||||||||||| || |||||||| Sbjct: 229 ccgacgtggggtaccccggcgggctgtggtt 259
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 69.9 bits (35), Expect = 3e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 125 accaaggagatcaagaacggccgcctggccatgct 159 ||||||||||||||||||||||||||||||||||| Sbjct: 660 accaaggagatcaagaacggccgcctggccatgct 694
>emb|X58516.1|PSLHAB1 P.silvestris mRNA for type II chlorophyll a/b binding protein of LHC I Length = 904 Score = 67.9 bits (34), Expect = 1e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 50 gggtaccccggtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaag 109 |||||||| ||||| ||||||||||||| || |||| ||| | ||||| || ||||| Sbjct: 653 gggtaccctggtgggttgtggtttgaccctcttggctggggctctggctctcctgagaaa 712 Query: 110 ctcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatg 169 ||||||||||| | |||||||| |||||||| || || |||||||| | || |||||| Sbjct: 713 atcaaggagctgaggaccaaggaaatcaagaatggacgattggccatgttggctgtcatg 772 Query: 170 ggcgcgtggttcca 183 || || |||||||| Sbjct: 773 ggagcttggttcca 786
>emb|AJ271124.1|PAB271124 Picea abies mRNA for putative chlorophyll A-B binding protein, (pPA0001 gene) Length = 1004 Score = 67.9 bits (34), Expect = 1e-08 Identities = 109/134 (81%) Strand = Plus / Plus Query: 50 gggtaccccggtggtctgtggtttgacccgctcggctacggcaccggctcgcccgagaag 109 |||||||| ||||| |||||||||||||| || |||| ||| | ||||| || ||||| Sbjct: 645 gggtaccctggtgggctgtggtttgaccctcttggctggggctctggctctcctgagaaa 704 Query: 110 ctcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatg 169 |||||||| || | |||||||| |||||||| || || |||||||| | || |||||| Sbjct: 705 atcaaggagttgaggaccaaggaaatcaagaatggacgattggccatgttggctgtcatg 764 Query: 170 ggcgcgtggttcca 183 || || |||||||| Sbjct: 765 ggagcttggttcca 778
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 6e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 118 gctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtg 177 ||||||||||||||||||||||||||| | || |||||||||||| || |||| || Sbjct: 16234576 gctgcgcaccaaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 16234635 Query: 178 gttccaggccg 188 ||||||||||| Sbjct: 16234636 gttccaggccg 16234646 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 10793618 aaggagatcaagaacggccgcctcgccatg 10793647 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 ||||||||||||||||| |||||||| Sbjct: 7133571 aaggagatcaagaacggtcgcctggc 7133596
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 61.9 bits (31), Expect = 6e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 118 gctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtg 177 ||||||||||||||||||||||||||| | || |||||||||||| || |||| || Sbjct: 51092 gctgcgcaccaaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 51151 Query: 178 gttccaggccg 188 ||||||||||| Sbjct: 51152 gttccaggccg 51162
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 61.9 bits (31), Expect = 6e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 118 gctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtg 177 ||||||||||||||||||||||||||| | || |||||||||||| || |||| || Sbjct: 139177 gctgcgcaccaaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 139236 Query: 178 gttccaggccg 188 ||||||||||| Sbjct: 139237 gttccaggccg 139247
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 61.9 bits (31), Expect = 6e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||||||||||| Sbjct: 745 caaggagatcaagaacggccgcctggccatg 775
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 61.9 bits (31), Expect = 6e-07 Identities = 61/71 (85%) Strand = Plus / Plus Query: 118 gctgcgcaccaaggagatcaagaacggccgcctggccatgctcgccgtcatgggcgcgtg 177 ||||||||||||||||||||||||||| | || |||||||||||| || |||| || Sbjct: 699 gctgcgcaccaaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 758 Query: 178 gttccaggccg 188 ||||||||||| Sbjct: 759 gttccaggccg 769
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 61.9 bits (31), Expect = 6e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||||||||||| Sbjct: 642 caaggagatcaagaacggccgcctggccatg 672
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 630 aaggagatcaagaacggccgcctggccatg 659
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 682 aaggagatcaagaacggccgcctggccatg 711
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 572 aaggagatcaagaacggccgcctggccatg 601
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 1338 aaggagatcaagaacggccgcctggccatg 1367
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 627 aaggagatcaagaacggccgcctggccatg 656
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 629 aaggagatcaagaacggccgcctggccatg 658
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 628 aaggagatcaagaacggccgcctggccatg 657
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 622 aaggagatcaagaacggccgcctggccatg 651
>gb|AF244524.1| Chlamydomonas reinhardtii chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1413 Score = 60.0 bits (30), Expect = 3e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 124 caccaaggagatcaagaacggccgcctggccatg 157 |||||||||| ||||||||||||||||||||||| Sbjct: 493 caccaaggaggtcaagaacggccgcctggccatg 526
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 1319 aaggagatcaagaacggccgcctggccatg 1348
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 1413 aaggagatcaagaacggccgcctggccatg 1442
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 521 aaggagatcaagaacggccgcctggccatg 550
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 614 aaggagatcaagaacggccgcctggccatg 643
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 656 aaggagatcaagaacggccgcctggccatg 685
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 1251 aaggagatcaagaacggccgcctggccatg 1280
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 60.0 bits (30), Expect = 3e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||||||| Sbjct: 1498 aaggagatcaagaacggccgcctggccatg 1527
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 125 accaaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||||||||| |||||| Sbjct: 940 accaaggagatcaagaacggccgcctcgccatg 972
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatgctcgccgtcatgggc 172 |||||| ||||||||||||||||||||||||| ||| || ||||| Sbjct: 1654 aaggaggtcaagaacggccgcctggccatgctggccttcctgggc 1698
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgct 159 |||||||||||||||||||||||| |||||||| Sbjct: 634 caaggagatcaagaacggccgcctcgccatgct 666
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgccgtc 166 |||||||||||||||||||| || |||||||||||| Sbjct: 575 gagatcaagaacggccgccttgctatgctcgccgtc 610
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatgct 159 |||||||||||||||||||| ||||||||||| Sbjct: 2289 aaggagatcaagaacggccgtctggccatgct 2320
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 56.0 bits (28), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgc 162 ||||||||||||||||||||||||||| ||| |||| Sbjct: 830 caaggagatcaagaacggccgcctggctatgttcgc 865
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatgctcgc 162 |||||| ||||||||||||||||||||||| |||| Sbjct: 571 aaggaggtcaagaacggccgcctggccatgatcgc 605
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||| |||||||||||| Sbjct: 810 caaggagatcaagaacggacgcctggccatg 840
>ref|NM_116012.2| Arabidopsis thaliana LHCA2; chlorophyll binding AT3G61470 (LHCA2) mRNA, complete cds Length = 1099 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 677 aagctcaaggagttgaggaccaaggagatcaagaacgg 714
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 634 aaggagatcaagaacggccgcctcgccatg 663
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 622 aaggagatcaagaacggccgcctcgccatg 651
>gb|AY171231.1| Chlamydomonas reinhardtii light-harvesting complex I protein (Lhca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1274 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| ||||||||||||||||||||||| Sbjct: 572 aaggaggtcaagaacggccgcctggccatg 601
>gb|BT012040.1| Arabidopsis thaliana At5g28450 mRNA sequence Length = 306 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 133 aagctcaaggagttgaggaccaaggagatcaagaacgg 170
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 1177 aaggagatcaagaacggccgcctggc 1202
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 700 aaggagatcaagaacggccgcctcgccatg 729
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 40905 aagctcaaggagttgaggaccaaggagatcaagaacgg 40942
>gb|AY065429.1| Arabidopsis thaliana putative Lhca2 protein (At3g61470) mRNA, complete cds Length = 1035 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 668 aagctcaaggagttgaggaccaaggagatcaagaacgg 705
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 637 aaggagatcaagaacggccgcctggc 662
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 14040 aaggagatcaagaacggccgcctcgccatg 14011
>gb|AY072483.1| Arabidopsis thaliana Lhca2 protein (At3g61470; F2A19.70) mRNA, complete cds Length = 900 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 601 aagctcaaggagttgaggaccaaggagatcaagaacgg 638
>gb|AY054670.1| Arabidopsis thaliana Lhca2 protein (At3g61470; F2A19.70) mRNA, complete cds Length = 945 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 641 aagctcaaggagttgaggaccaaggagatcaagaacgg 678
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 30024971 aaggagatcaagaacggccgcctcgccatg 30025000 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 23604165 aaggagatcaagaacggccgcctcgccatg 23604194
>emb|BX822099.1|CNS0A7GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 626 aagctcaaggagttgaggaccaaggagatcaagaacgg 663
>emb|BX823150.1|CNS0A635 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 629 aagctcaaggagttgaggaccaaggagatcaagaacgg 666
>emb|BX822082.1|CNS0A5ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 629 aagctcaaggagttgaggaccaaggagatcaagaacgg 666
>emb|BX822402.1|CNS0A5WB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 902 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 644 aagctcaaggagttgaggaccaaggagatcaagaacgg 681
>emb|BX823776.1|CNS0A5AG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 627 aagctcaaggagttgaggaccaaggagatcaagaacgg 664
>emb|BX823614.1|CNS0A5E1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS57ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 908 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 631 aagctcaaggagttgaggaccaaggagatcaagaacgg 668
>emb|BX822984.1|CNS0A4P7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 304 aagctcaaggagttgaggaccaaggagatcaagaacgg 341
>emb|BX842122.1|CNS09YDD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 977 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 630 aagctcaaggagttgaggaccaaggagatcaagaacgg 667
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 610 aaggagatcaagaacggccgcctggc 635
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||| ||||||||| Sbjct: 623 aaggagatcaagaacggccgtctggccatg 652
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| |||||||||||| Sbjct: 567 aaggagatcaagaacgggcgcctggccatg 596
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 20961 aaggagatcaagaacggccgcctcgccatg 20990
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 17341 aaggagatcaagaacggccgcctcgccatg 17370
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 66864 aaggagatcaagaacggccgcctcgccatg 66893
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 130236 aaggagatcaagaacggccgcctcgccatg 130265
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 2557 aaggagatcaagaacggccgcctcgccatg 2586
>gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, complete sequence Length = 37184 Score = 52.0 bits (26), Expect = 6e-04 Identities = 71/86 (82%) Strand = Plus / Plus Query: 98 tcgcccgagaagctcaaggagctgcgcaccaaggagatcaagaacggccgcctggccatg 157 ||||| || ||||||||||| || | ||||||||||||||||| || | || || ||| Sbjct: 36488 tcgcctgaaaagctcaaggaactcaggaccaaggagatcaagaatggaagacttgcaatg 36547 Query: 158 ctcgccgtcatgggcgcgtggttcca 183 || ||||||||||| || |||||||| Sbjct: 36548 cttgccgtcatgggtgcctggttcca 36573
>dbj|AB122120.1| Chlamydomonas reinhardtii LhcI-7 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2261 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| ||||||||||||||||||||||| Sbjct: 1594 aaggaggtcaagaacggccgcctggccatg 1623
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctgg 152 |||||||||||||||||||||||||| Sbjct: 1919 caaggagatcaagaacggccgcctgg 1944
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 693 aaggagatcaagaacggccgcctcgccatg 722
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 692 aaggagatcaagaacggccgcctcgccatg 721
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 1122 aaggagatcaagaacggccgcctcgccatg 1151
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 639 aaggagatcaagaacggccgccttgccatg 668
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 655 aaggagatcaagaacggccgccttgccatg 684
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 686 aaggagatcaagaacggccgcctcgccatg 715
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 691 aaggagatcaagaacggccgcctcgccatg 720
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 693 aaggagatcaagaacggccgcctcgccatg 722
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 715 aaggagatcaagaacggccgcctcgccatg 744
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 715 aaggagatcaagaacggccgcctcgccatg 744
>gb|BT002070.1| Arabidopsis thaliana Lhca2 protein (At3g61470) mRNA, complete cds Length = 991 Score = 52.0 bits (26), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||||||||||||| Sbjct: 641 aagctcaaggagttgaggaccaaggagatcaagaacgg 678
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 717 aaggagatcaagaacggccgcctcgccatg 746
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 222 aaggagatcaagaacggccgcctcgccatg 251
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 691 aaggagatcaagaacggccgcctcgccatg 720
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 691 aaggagatcaagaacggccgcctcgccatg 720
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 717 aaggagatcaagaacggccgcctcgccatg 746
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 130 ggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||||||||| |||||| ||||| Sbjct: 6826 ggagatcaagaacggccgccttgccatgatcgcc 6793 Score = 52.0 bits (26), Expect = 6e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 130 ggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||||||||| |||||| ||||| Sbjct: 1201 ggagatcaagaacggccgccttgccatgatcgcc 1234 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 |||||||||||||||||||| |||||| ||||| Sbjct: 9090 gagatcaagaacggccgcctcgccatgatcgcc 9122
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| |||||| Sbjct: 676 aaggagatcaagaacggccgcctcgccatg 705
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| ||||||||||||||||||||||| Sbjct: 707 aaggagctcaagaacggccgcctggccatg 736
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||| ||||||||| Sbjct: 207 aaggagatcaagaacggccggctggccatg 236
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 52.0 bits (26), Expect = 6e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| |||||||||||| Sbjct: 1031 aaggagatcaagaacggacgcctggccatg 1060
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 1658 aaggagatcaagaacggccgcctggc 1683
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 626 aaggagatcaagaacggccgcctggc 651
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 52.0 bits (26), Expect = 6e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 |||||||||||||||||||||||||| Sbjct: 1307 aaggagatcaagaacggccgcctggc 1332
>emb|AJ821811.1| Guillardia theta partial mRNA for light harvesting protein 5 (lhc5 gene) Length = 678 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 |||||||||||||||||||| |||||| ||||| Sbjct: 577 gagatcaagaacggccgccttgccatgatcgcc 609
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 |||||||||||||||||||| |||||| ||||| Sbjct: 513 gagatcaagaacggccgcctcgccatgatcgcc 545
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 50.1 bits (25), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||||||| | || |||||||||||| Sbjct: 828 caaggagatcaagaacggcaggctcgccatgctcgcc 864
>gb|AY847687.1| Dunaliella salina chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 653 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatgctcgccgtcatgggc 172 |||||| | ||||||||||||||||||||||| ||| || ||||| Sbjct: 511 aaggagctgaagaacggccgcctggccatgcttgccttcctgggc 555
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatgct 159 |||||| | ||||||||||||||||||||||| Sbjct: 3715 aaggaggtgaagaacggccgcctggccatgct 3746 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| ||||||||||||| ||||||||| Sbjct: 6971 aaggaggtcaagaacggccggctggccatg 7000 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| | ||||||||||||||||||||| Sbjct: 4871 aaggagctgaagaacggccgcctggccatg 4900 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| | ||||||||||||||||||||| Sbjct: 1428 aaggagctgaagaacggccgcctggccatg 1457 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| ||||||||||||| ||||||||| Sbjct: 187 aaggaggtcaagaacggccggctggccatg 216
>gb|AF517869.1| Griffithsia japonica isolate Gj446 light-harvest protein mRNA, partial cds Length = 758 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Plus Query: 130 ggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||||||| Sbjct: 492 ggagatcaagaacggacgcctggccatg 519
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 46.1 bits (23), Expect = 0.038 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 tcaagaacggccgcctggccatg 157 ||||||||||||||||||||||| Sbjct: 954525 tcaagaacggccgcctggccatg 954547 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 ctggccatgctcgccgtcatg 169 ||||||||||||||||||||| Sbjct: 2323429 ctggccatgctcgccgtcatg 2323449
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 670 caaggagatcaagaatggccgcctcgccatg 700
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 694 caaggagatcaagaatggccgcctcgccatg 724
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 694 caaggagatcaagaatggccgcctcgccatg 724
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 696 caaggagatcaagaatggccgcctcgccatg 726
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 701 caaggagatcaagaatggccgcctcgccatg 731
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 734 caaggagatcaagaatggccgcctcgccatg 764
>gb|AF110787.1|AF110787 Volvox carteri f. nagariensis clone G12 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 46.1 bits (23), Expect = 0.038 Identities = 26/27 (96%) Strand = Plus / Plus Query: 124 caccaaggagatcaagaacggccgcct 150 |||||||||| |||||||||||||||| Sbjct: 485 caccaaggaggtcaagaacggccgcct 511
>gb|AY088983.1| Arabidopsis thaliana clone 123159 mRNA, complete sequence Length = 1021 Score = 46.1 bits (23), Expect = 0.038 Identities = 32/35 (91%) Strand = Plus / Plus Query: 110 ctcaaggagctgcgcaccaaggagatcaagaacgg 144 ||||||||| || | |||||||||||||||||||| Sbjct: 679 ctcaaggagttgaggaccaaggagatcaagaacgg 713
>gb|AF134120.1| Arabidopsis thaliana Lhca2 protein (Lhca2) mRNA, complete cds Length = 960 Score = 46.1 bits (23), Expect = 0.038 Identities = 32/35 (91%) Strand = Plus / Plus Query: 110 ctcaaggagctgcgcaccaaggagatcaagaacgg 144 ||||||||| || | |||||||||||||||||||| Sbjct: 642 ctcaaggagttgaggaccaaggagatcaagaacgg 676
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 95774 caaggagatcaagaatggccgcctcgccatg 95804
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>emb|X95326.1|CRRNA818 C.reinhardtii mRNA for LI818r-3 protein Length = 1542 Score = 46.1 bits (23), Expect = 0.038 Identities = 35/39 (89%) Strand = Plus / Plus Query: 125 accaaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| | || |||||||||||||||||| ||||| Sbjct: 612 accaaggagctgaacaacggccgcctggccatgatcgcc 650
>emb|X95307.1|CRDNA818 C.reinhardtii LI818r-1 gene Length = 1019 Score = 46.1 bits (23), Expect = 0.038 Identities = 35/39 (89%) Strand = Plus / Plus Query: 125 accaaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| | || |||||||||||||||||| ||||| Sbjct: 822 accaaggagctgaacaacggccgcctggccatgatcgcc 860
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 670 caaggagatcaagaatggccgcctcgccatg 700
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 694 caaggagatcaagaatggccgcctcgccatg 724
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 694 caaggagatcaagaatggccgcctcgccatg 724
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 695 caaggagatcaagaatggccgcctcgccatg 725
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 701 caaggagatcaagaatggccgcctcgccatg 731
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 46.1 bits (23), Expect = 0.038 Identities = 29/31 (93%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatg 157 ||||||||||||||| |||||||| |||||| Sbjct: 699 caaggagatcaagaatggccgcctcgccatg 729
>emb|X12860.1|EGLHCI35 Euglena gracilis mRNA fragment for LHCI protein LH35 Length = 1124 Score = 46.1 bits (23), Expect = 0.038 Identities = 26/27 (96%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||||||||| Sbjct: 853 gagatcaagaacggccgactggccatg 879
>ref|NM_122728.1| Arabidopsis thaliana chlorophyll binding AT5G28450 mRNA, complete cds Length = 522 Score = 44.1 bits (22), Expect = 0.15 Identities = 31/34 (91%) Strand = Plus / Plus Query: 111 tcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||| || | |||||||||||||||||||| Sbjct: 353 tcaaggagttgaggaccaaggagatcaagaacgg 386
>gb|AY954736.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca5 gene, complete cds; nuclear gene for chloroplast product Length = 957 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgc 148 |||||||||||||||||||||| Sbjct: 789 caaggagatcaagaacggccgc 810
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 40090 aaggagatcaagaacgggcggctggccatg 40119
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Minus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 79136 aaggagctcaagaacggccgcctcgccatg 79107
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 400 aaggagatcaagaacggtcgtctggccatg 429
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 21808680 aaggagctcaagaacggccgcctcgccatg 21808709
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 132 agatcaagaacggccgcctggccatg 157 ||||||||||||||||||| |||||| Sbjct: 1087 agatcaagaacggccgcctcgccatg 1112
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||| |||||||| Sbjct: 654 aaggagatcaagaacgggcgcttggccatg 683
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||| |||||||| Sbjct: 654 aaggagatcaagaacgggcgcttggccatg 683
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||| |||||||| Sbjct: 643 aaggagatcaagaacgggcgcttggccatg 672
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||| |||||||| Sbjct: 654 aaggagatcaagaacgggcgcttggccatg 683
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||| |||||||| Sbjct: 654 aaggagatcaagaacgggcgcttggccatg 683
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 7581004 aaggagatcaagaacgggcggctggccatg 7581033
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 21801709 aaggagctcaagaacggccgcctcgccatg 21801738
>emb|BX823486.1|CNS0A5AK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 620 Score = 44.1 bits (22), Expect = 0.15 Identities = 34/38 (89%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | |||||||||| ||||||||| Sbjct: 345 aagctcaaggagttgaggaccaaggagagcaagaacgg 382
>emb|BX825372.1|CNS0A4Z2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 931 Score = 44.1 bits (22), Expect = 0.15 Identities = 34/38 (89%) Strand = Plus / Plus Query: 107 aagctcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||||||| || | ||||||||| |||||||||| Sbjct: 625 aagctcaaggagttgaggaccaaggagttcaagaacgg 662
>gb|AF262038.1|F21B23 Arabidopsis thaliana BAC F21B23 Length = 71284 Score = 44.1 bits (22), Expect = 0.15 Identities = 31/34 (91%) Strand = Plus / Minus Query: 111 tcaaggagctgcgcaccaaggagatcaagaacgg 144 |||||||| || | |||||||||||||||||||| Sbjct: 55362 tcaaggagttgaggaccaaggagatcaagaacgg 55329
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 ||||||||||||||||| |||||||| Sbjct: 85650 aaggagatcaagaacggtcgcctggc 85675
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 2073 aaggagatcaagaacggacggctggccatg 2102
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 664 aaggagctcaagaacggccgccttgccatg 693
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 1516 aaggagctcaagaacggccgcctcgccatg 1545
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 646 aaggagctcaagaacggccgcctcgccatg 675
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 769 aaggagatcaagaacgggcggctggccatg 798
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 759 aaggagatcaagaacgggcggctggccatg 788
>dbj|AK066997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K09, full insert sequence Length = 1202 Score = 44.1 bits (22), Expect = 0.15 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggc 153 ||||||||||||||||| |||||||| Sbjct: 822 aaggagatcaagaacggtcgcctggc 847
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 679 aaggagctcaagaacggccgcctcgccatg 708
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 312 aaggagctcaagaacggccgccttgccatg 341
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 770 aaggagatcaagaacgggcggctggccatg 799
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 254 aaggagctcaagaacggccgcctcgccatg 283
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||| || |||||| Sbjct: 854 aaggagatcaagaacggccggctcgccatg 883
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||| | ||||||||| Sbjct: 22 aaggagatcaagaacggcaggctggccatg 51
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 414 aaggagctcaagaacggccgcctcgccatg 443
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||| |||||||| |||||| Sbjct: 632 aaggagatcaagaatggccgcctcgccatg 661
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 7651091 aaggagatcaagaacgggcggctggccatg 7651120
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 668 aaggagctcaagaacggccgcctcgccatg 697
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| ||||| |||||| Sbjct: 646 aaggagatcaagaacggtcgccttgccatg 675
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||| || |||||| Sbjct: 712 aaggagatcaagaacggccggctcgccatg 741
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||| |||||||| |||||| Sbjct: 837 aaggagatcaagaatggccgcctcgccatg 866
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 1370 aaggagatcaagaacgggcggctggccatg 1399
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 ||||||||||||||||| || ||||||||| Sbjct: 224 aaggagatcaagaacgggcggctggccatg 253
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||||||||| |||||||| Sbjct: 682 aaggagatcaagaacggccgattggccatg 711
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||| |||||||||||||||| |||||| Sbjct: 660 aaggagctcaagaacggccgcctcgccatg 689
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 44.1 bits (22), Expect = 0.15 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 aaggagatcaagaacggccgcctggccatg 157 |||||||||||||| |||||||| |||||| Sbjct: 672 aaggagatcaagaaaggccgcctcgccatg 701
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 577 caaggagatcaagaatggcaggctcgccatgctcgcc 613
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 708 caaggagatcaagaatggcaggctcgccatgctcgcc 744
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 717 caaggagatcaagaatggcaggctcgccatgctcgcc 753
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 723 caaggagatcaagaatggcaggctcgccatgctcgcc 759
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 723 caaggagatcaagaatggcaggctcgccatgctcgcc 759
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 613 caaggagatcaagaatggcaggctcgccatgctcgcc 649
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 741 caaggagatcaagaatggcaggctcgccatgctcgcc 777
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 741 caaggagatcaagaatggcaggctcgccatgctcgcc 777
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 744 caaggagatcaagaatggcaggctcgccatgctcgcc 780
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 744 caaggagatcaagaatggcaggctcgccatgctcgcc 780
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 747 caaggagatcaagaatggcaggctcgccatgctcgcc 783
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 764 caaggagatcaagaatggcaggctcgccatgctcgcc 800
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 794 caaggagatcaagaatggcaggctcgccatgctcgcc 830
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 724 caaggagatcaagaatggcaggctcgccatgctcgcc 760
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 664 gagatcaagcacgcccgcctcgccatgctcgcc 696
>gb|AY267624.1| Bigelowiella natans chlorophyll a/b-binding protein II 2 mRNA, complete cds; nuclear gene for plastid product Length = 1147 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccg 147 ||||||||||||||||||||| Sbjct: 877 caaggagatcaagaacggccg 897
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 42.1 bits (21), Expect = 0.59 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 tggccatgctcgccgtcatgggcgc 174 |||||||||||||| |||||||||| Sbjct: 41401 tggccatgctcgccttcatgggcgc 41377
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 19754 gagatcaagcacgcccgcctcgccatgctcgcc 19722
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 716 gagatcaagcacgcccgcctcgccatgctcgcc 748
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 714 gagatcaagcacgcccgcctcgccatgctcgcc 746
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 714 gagatcaagcacgcccgcctcgccatgctcgcc 746
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 714 gagatcaagcacgcccgcctcgccatgctcgcc 746
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 720 gagatcaagcacgcccgcctcgccatgctcgcc 752
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgct 159 |||||||||||||||||| || ||||| ||||| Sbjct: 495 caaggagatcaagaacgggcggctggcgatgct 527
>gb|AF268323.1|AF268323 Guillardia theta light-harvesting complex protein LHCC10 mRNA, partial cds Length = 716 Score = 42.1 bits (21), Expect = 0.59 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 tcaagaacggccgcctggccatgctcgcc 163 |||||||||||||||| |||||| ||||| Sbjct: 527 tcaagaacggccgccttgccatgatcgcc 555
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 22810979 gagatcaagcacgcccgcctcgccatgctcgcc 22810947
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Minus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 5469052 caaggagatcaagaatggcaggctcgccatgctcgcc 5469016
>gb|AY826902.1| Heterocapsa triquetra clone HTLHC6711 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1598 Score = 42.1 bits (21), Expect = 0.59 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 aagaacggccgcctggccatgctcgccgt 165 |||||||| |||||||||||| ||||||| Sbjct: 794 aagaacggtcgcctggccatgatcgccgt 822
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Minus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 122633 caaggagatcaagaatggcaggctcgccatgctcgcc 122597
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Minus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 13787 caaggagatcaagaatggcaggctcgccatgctcgcc 13751
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 724 caaggagatcaagaatggcaggctcgccatgctcgcc 760
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Minus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 134 gagatcaagcacgcccgcctcgccatgctcgcc 102
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 794 caaggagatcaagaatggcaggctcgccatgctcgcc 830
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgct 159 |||||||||||||||||| || ||||| ||||| Sbjct: 613 caaggagatcaagaacgggcggctggcgatgct 645
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 42.1 bits (21), Expect = 0.59 Identities = 30/33 (90%) Strand = Plus / Plus Query: 131 gagatcaagaacggccgcctggccatgctcgcc 163 ||||||||| ||| |||||| |||||||||||| Sbjct: 726 gagatcaagcacgcccgcctcgccatgctcgcc 758
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 708 caaggagatcaagaatggcaggctcgccatgctcgcc 744
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 744 caaggagatcaagaatggcaggctcgccatgctcgcc 780
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 42.1 bits (21), Expect = 0.59 Identities = 33/37 (89%) Strand = Plus / Plus Query: 127 caaggagatcaagaacggccgcctggccatgctcgcc 163 ||||||||||||||| ||| | || |||||||||||| Sbjct: 725 caaggagatcaagaatggcaggctcgccatgctcgcc 761 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,121,181 Number of Sequences: 3902068 Number of extensions: 1121181 Number of successful extensions: 72795 Number of sequences better than 10.0: 333 Number of HSP's better than 10.0 without gapping: 336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71189 Number of HSP's gapped (non-prelim): 1579 length of query: 188 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 166 effective length of database: 17,147,199,772 effective search space: 2846435162152 effective search space used: 2846435162152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)