| Clone Name | baal20p19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473946.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 157 bits (79), Expect = 2e-35 Identities = 124/139 (89%) Strand = Plus / Plus Query: 91 atggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaac 150 |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 1 atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaac 60 Query: 151 cgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagt 210 || || ||||| |||||| |||||||||||||||||| |||||||| |||| | ||| Sbjct: 61 cgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctgaaagaagt 120 Query: 211 gatattcctgacattgaca 229 |||||||||||||| |||| Sbjct: 121 gatattcctgacatcgaca 139
>dbj|AK121268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105G11, full insert sequence Length = 777 Score = 157 bits (79), Expect = 2e-35 Identities = 124/139 (89%) Strand = Plus / Plus Query: 91 atggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaac 150 |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 243 atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaac 302 Query: 151 cgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagt 210 || || ||||| |||||| |||||||||||||||||| |||||||| |||| | ||| Sbjct: 303 cgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctgaaagaagt 362 Query: 211 gatattcctgacattgaca 229 |||||||||||||| |||| Sbjct: 363 gatattcctgacatcgaca 381
>ref|XM_480477.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 143 bits (72), Expect = 3e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 149 |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 104 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 163 Query: 150 ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 209 |||||| || |||||||| | || ||||||||||| || ||||||||||||| || ||| Sbjct: 164 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 223 Query: 210 tgatattcctgacattgaca 229 ||| |||||||||||||||| Sbjct: 224 tgacattcctgacattgaca 243
>ref|XM_507153.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0056O06.5 mRNA Length = 729 Score = 143 bits (72), Expect = 3e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 149 |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 125 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 184 Query: 150 ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 209 |||||| || |||||||| | || ||||||||||| || ||||||||||||| || ||| Sbjct: 185 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 244 Query: 210 tgatattcctgacattgaca 229 ||| |||||||||||||||| Sbjct: 245 tgacattcctgacattgaca 264
>dbj|AK121169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P16, full insert sequence Length = 729 Score = 143 bits (72), Expect = 3e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 149 |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 125 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 184 Query: 150 ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 209 |||||| || |||||||| | || ||||||||||| || ||||||||||||| || ||| Sbjct: 185 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 244 Query: 210 tgatattcctgacattgaca 229 ||| |||||||||||||||| Sbjct: 245 tgacattcctgacattgaca 264
>dbj|AK062573.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G05, full insert sequence Length = 711 Score = 143 bits (72), Expect = 3e-31 Identities = 123/140 (87%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaa 149 |||||| | |||||||||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 104 gatggcgaggagctcgttcaagctggagcacccactcgaaaggaggcaggctgaggccaa 163 Query: 150 ccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagag 209 |||||| || |||||||| | || ||||||||||| || ||||||||||||| || ||| Sbjct: 164 ccgcatcagggagaagtatcccgatagaattcctgtcattgttgagaaggctgagaggag 223 Query: 210 tgatattcctgacattgaca 229 ||| |||||||||||||||| Sbjct: 224 tgacattcctgacattgaca 243
>gb|AY109516.1| Zea mays CL5703_1 mRNA sequence Length = 1046 Score = 119 bits (60), Expect = 4e-24 Identities = 112/131 (85%) Strand = Plus / Plus Query: 99 gagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggctaaccgcataag 158 ||||||||||||||||||||| | |||| ||||||| | |||||||| || || || Sbjct: 149 gagctcgttcaagctggagcannnnnttgagaagaggcagtctgaggctaatcggatcag 208 Query: 159 agagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatattcc 218 |||||||||| ||||||||||||| ||||| ||||||||||||| || |||||| ||||| Sbjct: 209 agagaagtaccctgacagaattccagtgattgttgagaaggctgagaggagtgacattcc 268 Query: 219 tgacattgaca 229 |||||| |||| Sbjct: 269 tgacatcgaca 279
>gb|AY103879.1| Zea mays PCO136243 mRNA sequence Length = 908 Score = 113 bits (57), Expect = 2e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 89 cgatggccaagagctcgttcaagctggagcacccgctcgagaggaggcaggcggaggcta 148 ||||||| | |||||||||||||||||||||||| |||| |||||||| || ||||||| Sbjct: 266 cgatggcgaggagctcgttcaagctggagcaccccttcgaaaggaggcaagctgaggcta 325 Query: 149 accgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaaga 208 ||||||| || ||||||||| | || ||||||||||| || ||||||||||| | || || Sbjct: 326 accgcatcagggagaagtaccccgatagaattcctgtcattgttgagaaggccgagagga 385 Query: 209 gtgatattcctgacattgaca 229 |||| || || ||||| |||| Sbjct: 386 gtgacatcccagacatcgaca 406
>ref|NM_118319.2| Arabidopsis thaliana APG8A AT4G21980 (APG8A) mRNA, complete cds Length = 591 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 130 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 189 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 190 cctgacattgaca 202
>gb|AF492759.1| Arabidopsis thaliana autophagy APG8 (APG8A) mRNA, complete cds Length = 369 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 67 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 126 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 127 cctgacattgaca 139
>gb|BT006522.1| Arabidopsis thaliana At4g21980 gene, complete cds Length = 369 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 67 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 126 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 127 cctgacattgaca 139
>gb|AY085349.1| Arabidopsis thaliana clone 14759 mRNA, complete sequence Length = 732 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 271 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 330 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 331 cctgacattgaca 343
>gb|BT002024.1| Arabidopsis thaliana symbiosis-related like protein (At4g21980) mRNA, complete cds Length = 587 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 129 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 188 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 189 cctgacattgaca 201
>dbj|AB073175.1| Arabidopsis thaliana AtAPG8a mRNA for autophagy 8a, complete cds Length = 635 Score = 81.8 bits (41), Expect = 9e-13 Identities = 65/73 (89%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||||||||||| ||||||||||||| ||||| || ||||||||||| | |||||| || Sbjct: 164 agagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagtgatgtt 223 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 224 cctgacattgaca 236
>gb|BT018485.1| Zea mays clone EL01N0424D10.d mRNA sequence Length = 1475 Score = 71.9 bits (36), Expect = 8e-10 Identities = 84/100 (84%) Strand = Plus / Plus Query: 130 aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgtgatc 189 |||||||| || |||||||||||||| || ||||||||| | || ||||||||||| || Sbjct: 443 aggaggcaagctgaggctaaccgcatcagggagaagtaccccgatagaattcctgtcatt 502 Query: 190 gttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||||||||| | || |||||| || || ||||| |||| Sbjct: 503 gttgagaaggccgagaggagtgacatcccagacatcgaca 542
>ref|XM_478369.1| Oryza sativa (japonica cultivar-group), mRNA Length = 952 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 160 gagaagtactctgacagaattcctgtgatcgttgagaaggctg 202 ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 198 gagaagtactcagacagaattccggtgatcgttgagaaggctg 240
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 127 gagaggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 185 |||||||||||||| ||||||||||| || ||||| |||||| ||||||||||||||| Sbjct: 84893 gagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgt 84835 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 91 atggccaagagctcgttcaagctggagcacccgctcg 127 |||||||||||||||||||||||||| ||| |||||| Sbjct: 85996 atggccaagagctcgttcaagctggaccacacgctcg 85960
>emb|AJ417518.1|OSA417518 Oryza sativa partial mRNA for putative microtubule-associated protein (xd2 gene) Length = 613 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 160 gagaagtactctgacagaattcctgtgatcgttgagaaggctg 202 ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 59 gagaagtactcagacagaattccggtgatcgttgagaaggctg 101
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 127 gagaggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 185 |||||||||||||| ||||||||||| || ||||| |||||| ||||||||||||||| Sbjct: 31751623 gagaggaggcaggctgaggctaaccgtatcagagaaaagtacagtgacagaattcctgt 31751565 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 91 atggccaagagctcgttcaagctggagcacccgctcg 127 |||||||||||||||||||||||||| ||| |||||| Sbjct: 31752726 atggccaagagctcgttcaagctggaccacacgctcg 31752690
>dbj|AK059939.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-E03, full insert sequence Length = 953 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 160 gagaagtactctgacagaattcctgtgatcgttgagaaggctg 202 ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 198 gagaagtactcagacagaattccggtgatcgttgagaaggctg 240
>gb|DQ269983.1| Oryza sativa (indica cultivar-group) autophagy 8 (APG8) mRNA, complete cds Length = 360 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 160 gagaagtactctgacagaattcctgtgatcgttgagaaggctg 202 ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 70 gagaagtactcagacagaattccggtgatcgttgagaaggctg 112
>gb|DQ078759.1| Saccharum officinarum microtubule associated protein 1A/1B light chain 3 mRNA, partial cds Length = 303 Score = 65.9 bits (33), Expect = 5e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 145 gctaaccgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctggg 204 ||||||||||| || ||||||||| |||| ||||| ||||| || ||||||||||| | | Sbjct: 1 gctaaccgcatcagggagaagtaccctgatagaatccctgtcattgttgagaaggccgag 60 Query: 205 aagagtgatattcctgacattgaca 229 | |||||| || || |||||||||| Sbjct: 61 aggagtgacatcccagacattgaca 85
>ref|NM_179064.2| Arabidopsis thaliana microtubule binding AT4G16520 transcript variant AT4G16520.2 mRNA, complete cds Length = 892 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 396 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 454
>ref|NM_117751.2| Arabidopsis thaliana microtubule binding AT4G16520 transcript variant AT4G16520.1 mRNA, complete cds Length = 688 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 192 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 250
>gb|AF542187.1| Triticum aestivum autophagy mRNA, complete cds Length = 574 Score = 61.9 bits (31), Expect = 8e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 160 gagaagtactctgacagaattcctgtgatcgttgagaaggctg 202 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 137 gagaagtatgctgacagaattccggtgatcgttgagaaggctg 179
>gb|AY091667.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, complete cds Length = 366 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 67 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 125
>gb|AY070464.1| Arabidopsis thaliana AT4g16520/dl4285c mRNA, complete cds Length = 608 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 163 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 221
>emb|BX826371.1|CNS0A2HK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 506 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 31 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 89
>gb|AY085763.1| Arabidopsis thaliana clone 17851 mRNA, complete sequence Length = 666 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 192 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 250
>dbj|AB073180.1| Arabidopsis thaliana AtAPG8f mRNA for autophagy 8f, complete cds Length = 447 Score = 61.9 bits (31), Expect = 8e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||| Sbjct: 148 agagagaagtatcctgataggattccggtgattgttgagaaggctgagaagagtgatat 206
>gb|AY311346.1| Gossypium hirsutum microtubule-associated protein 1 light chain 3 mRNA, complete cds Length = 542 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 151 cgcataagagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagt 210 ||||| || |||||||| | |||||| ||||||| ||||| |||||||||| | |||| Sbjct: 91 cgcatcagggagaagtatccagacagagttcctgttatcgtggagaaggctgaaaggagt 150 Query: 211 gatattcctgacattga 227 || |||||||||||||| Sbjct: 151 gacattcctgacattga 167
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 190 gttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||||||||||| || |||||| |||||||||||||||| Sbjct: 5359052 gttgagaaggctgagaggagtgacattcctgacattgaca 5359091 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcg 127 |||||| | |||||||||||||||||||||||| |||| Sbjct: 5358356 gatggcgaggagctcgttcaagctggagcacccactcg 5358393 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Plus Query: 130 aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 185 ||||||||||| ||||| |||||||| || |||||||| | || ||||||||||| Sbjct: 5358897 aggaggcaggctgaggccaaccgcatcagggagaagtatcccgatagaattcctgt 5358952
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 56.0 bits (28), Expect = 5e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 190 gttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||||||||||| || |||||| |||||||||||||||| Sbjct: 28863 gttgagaaggctgagaggagtgacattcctgacattgaca 28902 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 90 gatggccaagagctcgttcaagctggagcacccgctcg 127 |||||| | |||||||||||||||||||||||| |||| Sbjct: 28167 gatggcgaggagctcgttcaagctggagcacccactcg 28204 Score = 48.1 bits (24), Expect = 0.012 Identities = 48/56 (85%) Strand = Plus / Plus Query: 130 aggaggcaggcggaggctaaccgcataagagagaagtactctgacagaattcctgt 185 ||||||||||| ||||| |||||||| || |||||||| | || ||||||||||| Sbjct: 28708 aggaggcaggctgaggccaaccgcatcagggagaagtatcccgatagaattcctgt 28763
>emb|BX824754.1|CNS0A5JQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 50.1 bits (25), Expect = 0.003 Identities = 61/73 (83%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||||| || ||||| || |||||| | | ||| |||||||| Sbjct: 133 agagagaagtattctgacagaatcccggtgattgtggagaagtcagagaaaagtgatatc 192 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 193 ccaaacattgaca 205
>ref|XM_567139.1| Cryptococcus neoformans var. neoformans JEC21 microtubule binding protein (CNA07930) partial mRNA Length = 767 Score = 48.1 bits (24), Expect = 0.012 Identities = 39/44 (88%) Strand = Plus / Plus Query: 172 gacagaattcctgtgatcgttgagaaggctgggaagagtgatat 215 ||||| ||||| |||||| ||||||||||| |||||||||||| Sbjct: 203 gacaggattcccgtgatctgtgagaaggctgagaagagtgatat 246
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6 Length = 213788 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 184 gtgatcgttgagaaggctgggaagagtgatat 215 ||||| ||||||||||||| |||||||||||| Sbjct: 71898 gtgattgttgagaaggctgagaagagtgatat 71867
>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44 Length = 198735 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Minus Query: 184 gtgatcgttgagaaggctgggaagagtgatat 215 ||||| ||||||||||||| |||||||||||| Sbjct: 49826 gtgattgttgagaaggctgagaagagtgatat 49795
>gb|AY104735.1| Zea mays PCO136400 mRNA sequence Length = 740 Score = 48.1 bits (24), Expect = 0.012 Identities = 30/32 (93%) Strand = Plus / Plus Query: 172 gacagaattcctgtgatcgttgagaaggctgg 203 ||||||||||||||||| |||||||| ||||| Sbjct: 259 gacagaattcctgtgattgttgagaaagctgg 290
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gtgatcgttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||| || ||||||||||| | |||||| ||||||||||||||| Sbjct: 84320 gtgattgtggagaaggctggacaaagtgatgttcctgacattgaca 84365 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcc 182 |||||||||||| ||||||||||||| Sbjct: 84215 agagagaagtaccctgacagaattcc 84240
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project) Length = 103270 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gtgatcgttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||| || ||||||||||| | |||||| ||||||||||||||| Sbjct: 30001 gtgattgtggagaaggctggacaaagtgatgttcctgacattgaca 30046 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcc 182 |||||||||||| ||||||||||||| Sbjct: 29896 agagagaagtaccctgacagaattcc 29921
>emb|AL021890.1|ATT8O5 Arabidopsis thaliana DNA chromosome 4, BAC clone T8O5 (ESSAII project) Length = 83029 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Plus Query: 184 gtgatcgttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||| || ||||||||||| | |||||| ||||||||||||||| Sbjct: 82831 gtgattgtggagaaggctggacaaagtgatgttcctgacattgaca 82876 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcc 182 |||||||||||| ||||||||||||| Sbjct: 82726 agagagaagtaccctgacagaattcc 82751
>gb|AF016284.1|AF016284 Arabidopsis thaliana 5'-adenylylsulfate reductase (APR3) gene, complete cds Length = 2945 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Minus Query: 184 gtgatcgttgagaaggctgggaagagtgatattcctgacattgaca 229 ||||| || ||||||||||| | |||||| ||||||||||||||| Sbjct: 2860 gtgattgtggagaaggctggacaaagtgatgttcctgacattgaca 2815
>ref|NM_178967.2| Arabidopsis thaliana microtubule binding AT4G04620 transcript variant AT4G04620.2 mRNA, complete cds Length = 618 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||| ||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || Sbjct: 161 agagcgaaataccctgaaagagttcccgtgattgtggaaaaagctggacagagtgatgtt 220 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 221 cctgacattgaca 233
>ref|NM_116700.1| Arabidopsis thaliana microtubule binding AT4G04620 transcript variant AT4G04620.1 mRNA, complete cds Length = 725 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||| ||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || Sbjct: 256 agagcgaaataccctgaaagagttcccgtgattgtggaaaaagctggacagagtgatgtt 315 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 316 cctgacattgaca 328
>ref|NM_115928.3| Arabidopsis thaliana microtubule binding AT3G60640 mRNA, complete cds Length = 637 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||| | || ||||| || |||||| | | ||| |||||||| Sbjct: 151 agagagaagtattctgacagagtcccggtgattgtggagaagtcagagaaaagtgatatc 210 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 211 ccaaacattgaca 223
>emb|AL672238.1| Human DNA sequence from clone RP11-293G6 on chromosome 1 Contains a NADH dehydrogenase 6 (MTND6) processed pseudogene, a NADH dehydrogenase 5 (MTND5) processed pseudogene, a NADH dehydrogenase 4 (MTND4) processed pseudogene, a NADH dehydrogenase 4L (MTND4L) processed pseudogene, a NADH dehydrogenase 3 (MTND3) processed pseudogene, a cytochrome c oxidase III (MTCO3) processed pseudogene and the 3' end of the GNG4 gene for guanine nucleotide binding protein (G protein), gamma 4, complete sequence Length = 39673 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 agaggaggcaggcggaggcta 148 ||||||||||||||||||||| Sbjct: 13008 agaggaggcaggcggaggcta 13028
>gb|AY062844.1| Arabidopsis thaliana putative protein (At3g60640; T4C21_50) mRNA, complete cds Length = 611 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||| | || ||||| || |||||| | | ||| |||||||| Sbjct: 151 agagagaagtattctgacagagtcccggtgattgtggagaagtcagagaaaagtgatatc 210 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 211 ccaaacattgaca 223
>gb|BT006385.1| Arabidopsis thaliana At4g04620 gene, complete cds Length = 369 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||| ||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || Sbjct: 67 agagcgaaataccctgaaagagttcccgtgattgtggaaaaagctggacagagtgatgtt 126 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 127 cctgacattgaca 139
>emb|BX825202.1|CNS0A53E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 618 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||| | || ||||| || |||||| | | ||| |||||||| Sbjct: 132 agagagaagtattctgacagagtcccggtgattgtggagaagtcagagaaaagtgatatc 191 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 192 ccaaacattgaca 204
>gb|AY084859.1| Arabidopsis thaliana clone 119712 mRNA, complete sequence Length = 725 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||| ||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || Sbjct: 256 agagcgaaataccctgaaagagttcccgtgattgtggaaaaagctggacagagtgatgtt 315 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 316 cctgacattgaca 328
>gb|BT001196.1| Arabidopsis thaliana putative protein (At3g60640) mRNA, complete cds Length = 445 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||| | || ||||| || |||||| | | ||| |||||||| Sbjct: 67 agagagaagtattctgacagagtcccggtgattgtggagaagtcagagaaaagtgatatc 126 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 127 ccaaacattgaca 139
>dbj|AB073181.1| Arabidopsis thaliana AtAPG8g mRNA for autophagy 8g, complete cds Length = 565 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 ||||||||||| ||||||||| | || ||||| || |||||| | | ||| |||||||| Sbjct: 128 agagagaagtattctgacagagtcccggtgattgtggagaagtcagagaaaagtgatatc 187 Query: 217 cctgacattgaca 229 || ||||||||| Sbjct: 188 ccaaacattgaca 200
>dbj|AB073176.1| Arabidopsis thaliana AtAPG8b mRNA for autophagy 8b, complete cds Length = 455 Score = 42.1 bits (21), Expect = 0.74 Identities = 60/73 (82%) Strand = Plus / Plus Query: 157 agagagaagtactctgacagaattcctgtgatcgttgagaaggctgggaagagtgatatt 216 |||| ||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || Sbjct: 124 agagcgaaataccctgaaagagttcccgtgattgtggaaaaagctggacagagtgatgtt 183 Query: 217 cctgacattgaca 229 ||||||||||||| Sbjct: 184 cctgacattgaca 196
>ref|XM_525579.1| PREDICTED: Pan troglodytes heme oxygenase (decyclizing) 1 (LOC470195), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 408 cgctcgagaggaggcaggcg 389
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 tgagaaggctgggaagagtgatat 215 ||||||||||| |||||||||||| Sbjct: 2189371 tgagaaggctgagaagagtgatat 2189348
>gb|AF074021.1| Arabidopsis thaliana BAC F4H6, chromosome IV, complete sequence Length = 103632 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 agagtgatattcctgacattgaca 229 |||||||| ||||||||||||||| Sbjct: 89645 agagtgatgttcctgacattgaca 89622
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ctcgttcaagctggagcacc 121 |||||||||||||||||||| Sbjct: 1852430 ctcgttcaagctggagcacc 1852411
>gb|AY460337.1| Homo sapiens heme oxygenase (decycling) 1 (HMOX1) gene, complete cds Length = 18677 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 3228 cgctcgagaggaggcaggcg 3209
>emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 on chromosome 22, complete sequence Length = 87869 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 38540 cgctcgagaggaggcaggcg 38521
>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13 Length = 200001 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 agagtgatattcctgacattgaca 229 |||||||| ||||||||||||||| Sbjct: 56316 agagtgatgttcctgacattgaca 56293
>emb|CR860175.1| Pongo pygmaeus mRNA; cDNA DKFZp469G141 (from clone DKFZp469G141) Length = 1576 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 27 cgctcgagaggaggcaggcg 8
>emb|CR623301.1| full-length cDNA clone CS0DI029YM22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1558 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 54 cgctcgagaggaggcaggcg 35
>emb|CR603909.1| full-length cDNA clone CS0DI041YF16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1540 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 36 cgctcgagaggaggcaggcg 17
>gb|AE011792.1| Xanthomonas axonopodis pv. citri str. 306, section 170 of 469 of the complete genome Length = 10523 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ctcgttcaagctggagcacc 121 |||||||||||||||||||| Sbjct: 3979 ctcgttcaagctggagcacc 3960
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccgtctccccgccgcctcct 28 |||||||||||||||||||| Sbjct: 13855946 ccgtctccccgccgcctcct 13855965
>ref|XM_393531.2| PREDICTED: Apis mellifera similar to HEAT-like repeat-containing protein (LOC410045), mRNA Length = 2439 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cctcgtccatccgccgaatc 62 |||||||||||||||||||| Sbjct: 2258 cctcgtccatccgccgaatc 2277
>gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95579 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gagaggaggcaggcggaggc 146 |||||||||||||||||||| Sbjct: 39414 gagaggaggcaggcggaggc 39433
>emb|CR456505.1| Homo sapiens HMOX1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.HMOX1.V2) Length = 1071 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 59 cgctcgagaggaggcaggcg 40
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccgtctccccgccgcctcct 28 |||||||||||||||||||| Sbjct: 13810226 ccgtctccccgccgcctcct 13810245
>emb|BX667525.2|CNS09SC3 Oryza sativa chromosome 12, . Partial sequence from PAC P0185F07 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 50021 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccgtctccccgccgcctcct 28 |||||||||||||||||||| Sbjct: 24749 ccgtctccccgccgcctcct 24768
>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region D3S3607-D3S1587, complete sequence Length = 98356 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gagaggaggcaggcggaggc 146 |||||||||||||||||||| Sbjct: 65437 gagaggaggcaggcggaggc 65418
>emb|X14782.2|HSHO5G Human HO-1 gene for heme oxygenase-1, exon 1 Length = 659 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctcgagaggaggcaggcg 141 |||||||||||||||||||| Sbjct: 567 cgctcgagaggaggcaggcg 548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,526,368 Number of Sequences: 3902068 Number of extensions: 1526368 Number of successful extensions: 24366 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24208 Number of HSP's gapped (non-prelim): 157 length of query: 229 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 207 effective length of database: 17,147,199,772 effective search space: 3549470352804 effective search space used: 3549470352804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)