| Clone Name | baal20p18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001032032.1| Drosophila melanogaster held out wings CG10293-RC, transcript variant C (how), mRNA Length = 4030 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gactgatagattttgcatgtg 96 ||||||||||||||||||||| Sbjct: 3623 gactgatagattttgcatgtg 3603
>gb|AC007114.8| Homo sapiens chromosome 17, clone RP11-166P13, complete sequence Length = 148781 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 tatctggttatttttcagatt 175 ||||||||||||||||||||| Sbjct: 112397 tatctggttatttttcagatt 112377
>gb|AC008144.5|AC008144 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR04F21, complete sequence Length = 171226 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gactgatagattttgcatgtg 96 ||||||||||||||||||||| Sbjct: 66825 gactgatagattttgcatgtg 66845
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 42.1 bits (21), Expect = 0.68 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 103 agtcgagatgatgagttggtgtgtgtacactaa 135 ||||||||||||||||||| || |||||||||| Sbjct: 1802 agtcgagatgatgagttggcgt-tgtacactaa 1833
>gb|AE003737.3| Drosophila melanogaster chromosome 3R, section 75 of 118 of the complete sequence Length = 178251 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gactgatagattttgcatgtg 96 ||||||||||||||||||||| Sbjct: 119559 gactgatagattttgcatgtg 119539
>gb|AF005849.1|AF005849 Drosophila melanogaster anon1F4 pseudogene, partial sequence Length = 2329 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gactgatagattttgcatgtg 96 ||||||||||||||||||||| Sbjct: 1922 gactgatagattttgcatgtg 1902
>ref|NM_128200.3| Arabidopsis thaliana RCY1; cyclin-dependent protein kinase regulator AT2G26430 (RCY1) mRNA, complete cds Length = 1583 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1291 ttcagataaatcaaggcatcattcttct 1318
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cttcattgctgatggatgct 54 |||||||||||||||||||| Sbjct: 112152 cttcattgctgatggatgct 112171
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ggatgctgctgtgctgcatg 67 |||||||||||||||||||| Sbjct: 34667 ggatgctgctgtgctgcatg 34686
>gb|AY150419.1| Arabidopsis thaliana putative cyclin (At2g26430) mRNA, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1173 ttcagataaatcaaggcatcattcttct 1200
>gb|AY091085.1| Arabidopsis thaliana putative cyclin (At2g26430) mRNA, complete cds Length = 1537 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1287 ttcagataaatcaaggcatcattcttct 1314
>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15, complete sequence Length = 211127 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgatggatgctgctgtgctg 63 |||||||||||||||||||| Sbjct: 84393 tgatggatgctgctgtgctg 84374
>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15, complete sequence Length = 164638 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgatggatgctgctgtgctg 63 |||||||||||||||||||| Sbjct: 139690 tgatggatgctgctgtgctg 139671
>gb|AF249734.1| Arabidopsis thaliana ania-6a type cyclin (RCY1) mRNA, complete cds Length = 1433 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1186 ttcagataaatcaaggcatcattcttct 1213
>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgatggatgctgctgtgctg 63 |||||||||||||||||||| Sbjct: 30960 tgatggatgctgctgtgctg 30941
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gatgagttggtgtgtgtaca 131 |||||||||||||||||||| Sbjct: 133576 gatgagttggtgtgtgtaca 133595
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 29176 ttcagataaatcaaggcatcattcttct 29149
>ref|XM_686371.1| PREDICTED: Danio rerio similar to endothelial cell adhesion molecule (LOC563007), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tgatggatgctgctgtgctg 63 |||||||||||||||||||| Sbjct: 204 tgatggatgctgctgtgctg 223
>gb|AC156618.5| Mus musculus chromosome 3, clone RP24-372J15, complete sequence Length = 171545 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tgctgctgtgctgcatgtct 70 |||||||||||||||||||| Sbjct: 22992 tgctgctgtgctgcatgtct 23011
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 atggatgctgctgtgctgca 65 |||||||||||||||||||| Sbjct: 18990768 atggatgctgctgtgctgca 18990787
>emb|BX819076.1|CNS0A9W0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1286 ttcagataaatcaaggcatcattcttct 1313
>gb|AC114311.3| Homo sapiens chromosome 5 clone RP11-2N5, complete sequence Length = 96123 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ttatttttcagattaatcaa 181 |||||||||||||||||||| Sbjct: 50396 ttatttttcagattaatcaa 50377
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gtgtgtgtacactaaaaaga 140 |||||||||||||||||||| Sbjct: 75303 gtgtgtgtacactaaaaaga 75284
>gb|AY086218.1| Arabidopsis thaliana clone 22595 mRNA, complete sequence Length = 1583 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 ttcagattaatcaaggcatctttcttct 195 ||||||| |||||||||||| ||||||| Sbjct: 1291 ttcagataaatcaaggcatcattcttct 1318
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 atggatgctgctgtgctgca 65 |||||||||||||||||||| Sbjct: 83438 atggatgctgctgtgctgca 83457
>gb|AC010582.6|AC010582 Homo sapiens chromosome 14 clone CTD-2547F10, complete sequence Length = 191549 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tcaaggcatctttcttcttc 197 |||||||||||||||||||| Sbjct: 102526 tcaaggcatctttcttcttc 102507
>gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ggatgctgctgtgctgcatg 67 |||||||||||||||||||| Sbjct: 130632 ggatgctgctgtgctgcatg 130651
>emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 in linkage group 9, complete sequence Length = 211682 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 ctgatggatgctgctgtgctgcat 66 ||||||||||||| |||||||||| Sbjct: 25039 ctgatggatgctgatgtgctgcat 25016
>emb|AL136040.5|CNS01DVV Human chromosome 14 DNA sequence BAC C-2506P8 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 199420 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcaaggcatctttcttcttc 197 |||||||||||||||||||| Sbjct: 97512 tcaaggcatctttcttcttc 97531
>gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, complete sequence Length = 182940 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tgctgctgtgctgcatgtct 70 |||||||||||||||||||| Sbjct: 165625 tgctgctgtgctgcatgtct 165644
>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3, complete sequence Length = 174887 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgatggatgctgctgtgctg 63 |||||||||||||||||||| Sbjct: 83631 tgatggatgctgctgtgctg 83612
>gb|AF005850.1|AF005850 Drosophila yakuba anon1F4 pseudogene, partial sequence Length = 1611 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 actgatagattttgcatgtg 96 |||||||||||||||||||| Sbjct: 1137 actgatagattttgcatgtg 1118
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020, complete sequence Length = 80920 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tatctggttatttttcagat 174 |||||||||||||||||||| Sbjct: 66808 tatctggttatttttcagat 66789
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cttcattgctgatggatgct 54 |||||||||||||||||||| Sbjct: 83785 cttcattgctgatggatgct 83804 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,153,560 Number of Sequences: 3902068 Number of extensions: 2153560 Number of successful extensions: 160825 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 160683 Number of HSP's gapped (non-prelim): 143 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)