ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal21e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin 270 2e-69
2gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, co... 44 0.23
3gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, com... 44 0.23
4gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, compl... 44 0.23
5gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, com... 42 0.89
6gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.89
7gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.89
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.89
9emb|AL954814.17| Zebrafish DNA sequence from clone DKEY-79I1 in ... 42 0.89
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.89
11gb|L31356.1|PIGS0352MR Pig microsatellite (S0352) 42 0.89
12gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, com... 40 3.5
13gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
14gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, compl... 40 3.5
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.5
16gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 40 3.5
17gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosom... 40 3.5
18gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosom... 40 3.5
19gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119... 40 3.5
20gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosom... 40 3.5
21emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in ... 40 3.5
22gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosom... 40 3.5
23emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in... 40 3.5
24emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chro... 40 3.5
25emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chr... 40 3.5
26emb|AL683802.5| Mouse DNA sequence from clone RP23-247G3 on chro... 40 3.5
27emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in... 40 3.5
28dbj|AB192510.1| Sus scrofa genomic DNA, chromosome 7, BAC clone:... 40 3.5
29gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
30gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 gen... 40 3.5
31gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosom... 40 3.5
32dbj|AK048500.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 3.5
33gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cance... 40 3.5
34gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7,... 40 3.5
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
39gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 40 3.5
40gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome... 40 3.5
41gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 3.5
42gb|AC149590.5| Mus musculus BAC clone RP23-348L9 from chromosome... 40 3.5
43dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
44emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chr... 40 3.5
45dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
46dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
47gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, comple... 40 3.5
48gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, comp... 40 3.5
49dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 3.5
50gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
51emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chr... 40 3.5
52gb|AC171896.2| Capitella capitata clone JGIBGZA-33J12, complete ... 40 3.5
53gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, comple... 40 3.5
54gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, comple... 40 3.5
55emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on ch... 40 3.5
56emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chr... 40 3.5
57emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chro... 40 3.5
58emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chr... 40 3.5
59emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chr... 40 3.5
60gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 3.5 
>emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin
          Length = 2244

 Score =  270 bits (136), Expect = 2e-69
 Identities = 185/202 (91%), Gaps = 7/202 (3%)
 Strand = Plus / Plus

                                                                        
Query: 62   catgcatgcatggatatcgccagatacaccgatttgtttgtgctcgaatgaattgctcga 121
            |||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2038 catgcatgcacggacattgccagatacaccgaattgtttgtgctcgaatgaattgctcga 2097

                                                                        
Query: 122  tgcatggtttgctccagtaataatgtcttcgaattactacctttttgtaccgtaagatat 181
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2098 tgcatggtttgctcaagtaataatgtcttcgaattactacctttttgtaccgtaagatat 2157

                                                                        
Query: 182  actactgtcgtaatactagcg-------tgtacttaattcaacgtactgaaatgaatcct 234
            ||||||| |||||||||||||       ||||| ||| || |||||||||||||||||||
Sbjct: 2158 actactgccgtaatactagcgtgtaccttgtacgtaactcgacgtactgaaatgaatcct 2217

                                  
Query: 235  gatggctgaggtgtctctctga 256
            ||||||||||| ||||||||||
Sbjct: 2218 gatggctgaggcgtctctctga 2239
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>gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, complete sequence
          Length = 141449

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 57    tcatgcatgcatgcatggatat 78
             ||||||||||||||||||||||
Sbjct: 17896 tcatgcatgcatgcatggatat 17917
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>gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, complete sequence
          Length = 145042

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 57    tcatgcatgcatgcatggatat 78
             ||||||||||||||||||||||
Sbjct: 84976 tcatgcatgcatgcatggatat 84955
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>gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, complete sequence
          Length = 140977

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 57     tcatgcatgcatgcatggatat 78
              ||||||||||||||||||||||
Sbjct: 123078 tcatgcatgcatgcatggatat 123057
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>gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, complete sequence
          Length = 175229

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     cccatcatgcatgcatgcatg 73
              |||||||||||||||||||||
Sbjct: 101244 cccatcatgcatgcatgcatg 101224
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>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    tcatgcatgcatgcatggata 77
             |||||||||||||||||||||
Sbjct: 45808 tcatgcatgcatgcatggata 45828
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>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    tcatgcatgcatgcatggata 77
             |||||||||||||||||||||
Sbjct: 45808 tcatgcatgcatgcatggata 45828
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 57       tcatgcatgcatgcatggata 77
                |||||||||||||||||||||
Sbjct: 21043493 tcatgcatgcatgcatggata 21043513
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>emb|AL954814.17| Zebrafish DNA sequence from clone DKEY-79I1 in linkage group 14,
             complete sequence
          Length = 175477

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    catgcatgcatgcatggatat 78
             |||||||||||||||||||||
Sbjct: 84122 catgcatgcatgcatggatat 84102
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 57       tcatgcatgcatgcatggata 77
                |||||||||||||||||||||
Sbjct: 21353734 tcatgcatgcatgcatggata 21353754
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>gb|L31356.1|PIGS0352MR Pig microsatellite (S0352)
          Length = 530

 Score = 42.1 bits (21), Expect = 0.89
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  tcatattatctcccatcatgc 62
           |||||||||||||||||||||
Sbjct: 321 tcatattatctcccatcatgc 341
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>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence
          Length = 181980

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 96738 catgcatgcatgcatggata 96719
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>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ccatcatgcatgcatgcatg 73
              ||||||||||||||||||||
Sbjct: 139624 ccatcatgcatgcatgcatg 139643
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>gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, complete sequence
          Length = 179251

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 175174 catgcatgcatgcatggata 175193



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 175126 catgcatgcatgcatggata 175145
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 55       catcatgcatgcatgcatgg 74
                ||||||||||||||||||||
Sbjct: 31504099 catcatgcatgcatgcatgg 31504118



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       ccatcatgcatgcatgcatg 73
                ||||||||||||||||||||
Sbjct: 15910793 ccatcatgcatgcatgcatg 15910774



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 58       catgcatgcatgcatggata 77
                ||||||||||||||||||||
Sbjct: 13291200 catgcatgcatgcatggata 13291181
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    catcatgcatgcatgcatgg 74
             ||||||||||||||||||||
Sbjct: 88497 catcatgcatgcatgcatgg 88478
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>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete
             sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 90174 catgcatgcatgcatggata 90155
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>gb|AC132272.3| Mus musculus BAC clone RP24-339P23 from chromosome 16, complete
             sequence
          Length = 147166

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atgcatgcatgcatggatat 78
             ||||||||||||||||||||
Sbjct: 50888 atgcatgcatgcatggatat 50869
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>gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119A19, complete sequence
          Length = 197456

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 33290 catgcatgcatgcatggata 33271
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>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence
          Length = 204940

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     atgcatgcatgcatggatat 78
              ||||||||||||||||||||
Sbjct: 191162 atgcatgcatgcatggatat 191143
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>emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in linkage group 5, complete
              sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 149993 catgcatgcatgcatggata 149974
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>gb|AC159199.3| Mus musculus BAC clone RP23-401H23 from chromosome 16, complete
             sequence
          Length = 218059

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atgcatgcatgcatggatat 78
             ||||||||||||||||||||
Sbjct: 25045 atgcatgcatgcatggatat 25026
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>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11,
             complete sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    catcatgcatgcatgcatgg 74
             ||||||||||||||||||||
Sbjct: 48708 catcatgcatgcatgcatgg 48689
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>emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chromosome 11 Contains the
             5' end of a novel pseudogene (similar to hypothetical
             protein TR:Q8C517), 3 novel pseudogenes (similar to
             hypothetical protein TR:Q8C517) and the 5' end of the
             Col1a1 gene for pro-collagen type I alpha 1, complete
             sequence
          Length = 133405

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tgcatgcatgcatggatatc 79
             ||||||||||||||||||||
Sbjct: 54785 tgcatgcatgcatggatatc 54804
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>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     tgcatgcatgcatggatatc 79
              ||||||||||||||||||||
Sbjct: 203171 tgcatgcatgcatggatatc 203190
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>emb|AL683802.5| Mouse DNA sequence from clone RP23-247G3 on chromosome 11 Contains a
            novel pseudogene (similar to hypothetical protein
            TR:Q8C517) and the 3' end of a novel pseudogene (similar
            to hypothetical protein TR:Q8C517), complete sequence
          Length = 32978

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   tgcatgcatgcatggatatc 79
            ||||||||||||||||||||
Sbjct: 1909 tgcatgcatgcatggatatc 1928
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>emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in linkage group 5,
              complete sequence
          Length = 206722

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 184467 catgcatgcatgcatggata 184486
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>dbj|AB192510.1| Sus scrofa genomic DNA, chromosome 7, BAC clone: L111D05, complete
             sequence
          Length = 150159

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tcatattatctcccatcatg 61
             ||||||||||||||||||||
Sbjct: 74137 tcatattatctcccatcatg 74118
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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
              complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 169540 catgcatgcatgcatggata 169521
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>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
             sequence
          Length = 117157

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 67431 catgcatgcatgcatggata 67450
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>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence
          Length = 202301

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ccatcatgcatgcatgcatg 73
             ||||||||||||||||||||
Sbjct: 36537 ccatcatgcatgcatgcatg 36518
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>dbj|AK048500.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130066J20 product:interleukin 10
            receptor, beta, full insert sequence
          Length = 4506

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   atgcatgcatgcatggatat 78
            ||||||||||||||||||||
Sbjct: 3345 atgcatgcatgcatggatat 3326
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>gb|AC158658.4| Mus musculus 6 BAC RP23-400L4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197909

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ccatcatgcatgcatgcatg 73
              ||||||||||||||||||||
Sbjct: 195118 ccatcatgcatgcatgcatg 195137
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>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 77418 catgcatgcatgcatggata 77399



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 77188 catgcatgcatgcatggata 77169
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 58       catgcatgcatgcatggata 77
                ||||||||||||||||||||
Sbjct: 16290651 catgcatgcatgcatggata 16290632
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 199      agcgtgtacttaattcaacg 218
                ||||||||||||||||||||
Sbjct: 25685287 agcgtgtacttaattcaacg 25685306



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      catgcatgcatgcatggata 77
               ||||||||||||||||||||
Sbjct: 7747996 catgcatgcatgcatggata 7747977
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 58       catgcatgcatgcatggata 77
                ||||||||||||||||||||
Sbjct: 19328014 catgcatgcatgcatggata 19328033
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 55       catcatgcatgcatgcatgg 74
                ||||||||||||||||||||
Sbjct: 31594615 catcatgcatgcatgcatgg 31594634



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       ccatcatgcatgcatgcatg 73
                ||||||||||||||||||||
Sbjct: 15905327 ccatcatgcatgcatgcatg 15905308



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 58       catgcatgcatgcatggata 77
                ||||||||||||||||||||
Sbjct: 13287975 catgcatgcatgcatggata 13287956
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ccatcatgcatgcatgcatg 73
             ||||||||||||||||||||
Sbjct: 33181 ccatcatgcatgcatgcatg 33162
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>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete sequence
          Length = 229269

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tcatgcatgcatgcatggat 76
              ||||||||||||||||||||
Sbjct: 217445 tcatgcatgcatgcatggat 217426
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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tcatgcatgcatgcatggat 76
             ||||||||||||||||||||
Sbjct: 33439 tcatgcatgcatgcatggat 33420
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>gb|AC149590.5| Mus musculus BAC clone RP23-348L9 from chromosome 5, complete sequence
          Length = 196662

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 124163 catgcatgcatgcatggata 124182
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>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 32787 catgcatgcatgcatggata 32806
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>emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chromosome 2, complete
              sequence
          Length = 222104

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 221026 catgcatgcatgcatggata 221045
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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0700D12
          Length = 145177

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   agcgtgtacttaattcaacg 218
             ||||||||||||||||||||
Sbjct: 63035 agcgtgtacttaattcaacg 63054
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>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1221_H04
          Length = 129387

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 88719 catgcatgcatgcatggata 88700
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>gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, complete sequence
          Length = 153574

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 71114 catgcatgcatgcatggata 71095
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>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence
          Length = 225977

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 189772 catgcatgcatgcatggata 189753
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>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete
             sequence
          Length = 166277

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   tgaatcctgatggctgaggt 246
             ||||||||||||||||||||
Sbjct: 64837 tgaatcctgatggctgaggt 64856
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 58       catgcatgcatgcatggata 77
                ||||||||||||||||||||
Sbjct: 16298893 catgcatgcatgcatggata 16298874
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>emb|AL603787.8| Mouse DNA sequence from clone RP23-169J19 on chromosome 11 Contains the
             3' end of a novel gene, the gene for a novel protein
             similar to nascent polypeptide-associated complex alpha
             polypeptide Naca, the Tbrg4 gene for transforming growth
             factor beta regulated gene 4, the Wap gene for whey acidic
             protein, an ethanol induced 6 (Etohi6) pseudogene, two
             novel genes, the Ramp3 gene for receptor (calcitonin)
             activity modifying protein 3, a lactate dehydrogenase 1 A
             chain (Ldh1) pseudogene, a mitochondrial ribosomal protein
             L36 (Mrpl36) pseudogene, a retinoblastoma binding protein
             5 (Rbbp5) pseudogene, a ribosomal protein L7A (Rpl7a)
             pseudogene and two CpG islands, complete sequence
          Length = 225879

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 67269 catgcatgcatgcatggata 67250
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>gb|AC171896.2| Capitella capitata clone JGIBGZA-33J12, complete sequence
          Length = 31338

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 25834 catgcatgcatgcatggata 25853
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>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence
          Length = 187465

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ccatcatgcatgcatgcatg 73
             ||||||||||||||||||||
Sbjct: 74006 ccatcatgcatgcatgcatg 73987
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>gb|AC150035.3| Mus musculus BAC clone RP23-348A6 from 16, complete sequence
          Length = 188444

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     atgcatgcatgcatggatat 78
              ||||||||||||||||||||
Sbjct: 104460 atgcatgcatgcatggatat 104441
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>emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on chromosome 2, complete
             sequence
          Length = 209013

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 72619 catgcatgcatgcatggata 72638
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>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete
             sequence
          Length = 175570

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atgcatgcatgcatggatat 78
             ||||||||||||||||||||
Sbjct: 30755 atgcatgcatgcatggatat 30736
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>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete
             sequence
          Length = 221903

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atgcatgcatgcatggatat 78
             ||||||||||||||||||||
Sbjct: 30557 atgcatgcatgcatggatat 30538
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>emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chromosome 4, complete
              sequence
          Length = 201741

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     catgcatgcatgcatggata 77
              ||||||||||||||||||||
Sbjct: 180328 catgcatgcatgcatggata 180309
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>emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chromosome 2, complete
             sequence
          Length = 209452

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 91129 catgcatgcatgcatggata 91110
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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catgcatgcatgcatggata 77
             ||||||||||||||||||||
Sbjct: 28641 catgcatgcatgcatggata 28660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,916,954
Number of Sequences: 3902068
Number of extensions: 1916954
Number of successful extensions: 56732
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55896
Number of HSP's gapped (non-prelim): 832
length of query: 271
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 249
effective length of database: 17,147,199,772
effective search space: 4269652743228
effective search space used: 4269652743228
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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