ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465979.1| Oryza sativa (japonica cultivar-group), mRNA 194 2e-46
2dbj|AK103390.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
3gb|AY109525.1| Zea mays CL5474_1 mRNA sequence 137 5e-29
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7ref|NM_113578.3| Arabidopsis thaliana unknown protein AT3G26670 ... 60 9e-06
8ref|NM_202638.1| Arabidopsis thaliana unknown protein AT3G26670 ... 60 9e-06
9ref|NM_180303.1| Arabidopsis thaliana unknown protein AT3G26670 ... 60 9e-06
10gb|AY093129.1| Arabidopsis thaliana unknown protein (At3g26670) ... 60 9e-06
11gb|BT006587.1| Arabidopsis thaliana At3g26670 mRNA, complete cds 60 9e-06
12emb|BX824813.1|CNS0A6OZ Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
13emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence 50 0.009
14emb|X56114.1|ATTAR10 A.thaliana target DNA 10 50 0.009
15dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.009
16emb|BX649279.7| Zebrafish DNA sequence from clone CH211-212D10 i... 46 0.14
17gb|AC123072.4| Mus musculus BAC clone RP23-87D8 from chromosome ... 42 2.1
18ref|XM_863035.1| PREDICTED: Canis familiaris similar to DNA mism... 42 2.1
19ref|XM_537511.2| PREDICTED: Canis familiaris similar to DNA mism... 42 2.1
20ref|XM_863029.1| PREDICTED: Canis familiaris similar to DNA mism... 42 2.1
21ref|XM_863026.1| PREDICTED: Canis familiaris similar to DNA mism... 42 2.1
22emb|AL109934.22|HSDJ81L22 Human DNA sequence from clone RP1-81L2... 42 2.1
23emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19... 42 2.1
24ref|XM_577460.1| PREDICTED: Rattus norvegicus similar to Ski pro... 42 2.1
25ref|NM_178804.2| Mus musculus slit homolog 2 (Drosophila) (Slit2... 40 8.5
26gb|BC059267.1| Mus musculus slit homolog 2 (Drosophila), mRNA (c... 40 8.5
27gb|AC133212.2| Mus musculus chromosome UNK clone RP23-45E17, com... 40 8.5
28emb|AL591667.7| Human DNA sequence from clone RP11-389N9 on chro... 40 8.5
29emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L... 40 8.5
30gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence 40 8.5
31emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4,... 40 8.5
32gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 40 8.5
33dbj|AK220505.1| Mus musculus mRNA for mKIAA4141 protein 40 8.5
34ref|XM_925841.1| PREDICTED: Homo sapiens similar to TBP-associat... 40 8.5
35gb|AC015943.7| Homo sapiens chromosome 17, clone RP11-581B19, co... 40 8.5
36gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50... 40 8.5
37gb|S75476.1| PGK1=phosphoglycerate kinase 1 {3' nuclease-sensiti... 40 8.5
38gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50... 40 8.5
39gb|AF144628.1|AF144628 Mus musculus SLIT2 (Slit2) mRNA, complete... 40 8.5
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
42gb|AC068943.4| Homo sapiens BAC clone RP11-769M2 from 2, complet... 40 8.5
43gb|AC110770.4| Homo sapiens BAC clone RP11-159P15 from 2, comple... 40 8.5
44gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, com... 40 8.5
45gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, co... 40 8.5
46dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.5
47dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.5
48dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
49gb|AC153883.6| Mus musculus 10 BAC RP23-368G20 (Roswell Park Can... 40 8.5
50gb|AC153368.5| Mus musculus 10 BAC RP23-269H21 (Roswell Park Can... 40 8.5
51gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33... 40 8.5
52gb|AF074960.1|AF074960 Mus musculus neurogenic extracellular sli... 40 8.5
53gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, r... 40 8.5
54emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, comple... 40 8.5
55emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 m... 40 8.5
56emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4,... 40 8.5
57emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on ch... 40 8.5 
>ref|XM_465979.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1892

 Score =  194 bits (98), Expect = 2e-46
 Identities = 211/248 (85%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 135 gactcatggccgactggattataggagcgttgatcaatatcgtgggtagtgttgccataa 194
           ||||||||| ||||||| ||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 349 gactcatgggcgactgggttataggagcactgatcaacattgtggggagtgttgccataa 408

                                                                       
Query: 195 attttggtactaaccttctcaaattgggccatgatcagagagaaaagttgtactcaagta 254
           | |||||||| |||||||| ||||||||||||||||||||||| ||| | |   |||  |
Sbjct: 409 actttggtaccaaccttctgaaattgggccatgatcagagagagaagctttcgacaacca 468

                                                                       
Query: 255 a---caatcaagtcgatggcaaatttgtcccaaaatcagttatgtatttccagacttgga 311
           |   |||||||| | ||| ||||||||| || || ||||||||| |||| || |||||||
Sbjct: 469 acaacaatcaaggcaatgacaaatttgttccgaagtcagttatgcattttcaaacttgga 528

                                                                       
Query: 312 gaataggtatactctttttcgctgtggggaactgcctaaacttcatgtccttcgcatatg 371
           ||||||| ||||| || || |||| ||| |||||||| ||||||||||||||||||||||
Sbjct: 529 gaataggcatactgttctttgctgcgggaaactgcctcaacttcatgtccttcgcatatg 588

                   
Query: 372 ccgcacag 379
           ||||||||
Sbjct: 589 ccgcacag 596



 Score =  137 bits (69), Expect = 5e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                        
Query: 453  ggagtggagagacaattctttcagataatgcaaaagatactagcacacattggcgaacac 512
            |||||||||| || ||  |||| |||| ||| ||| ||||| || |||||||||| ||| 
Sbjct: 859  ggagtggagaaactatcatttcggatagtgcgaaacatactggctcacattggcggacat 918

                                                                        
Query: 513  tgctgcccttttcttacgctatcgtatctggtgccattgggtcttgctccgtcttgtttg 572
            || |||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||
Sbjct: 919  tgttgccattttcttatgctattgtatctggtgctattggatcttgttctgtcttatttg 978

                                                             
Query: 573  cgaaatcattgtctaacatgctgaggctgaccatgagcagcagatacca 621
            | ||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 979  caaaatcattgtcaaacatgctgaggctaacaatgagcagcagatacca 1027



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 381 gtcatggttgccacaacttttattgtctttggcaatgtcttcttggtttccttcggcaat 440
           |||||||| || ||||| |||||||| ||||||||| ||||| | |||||||| || |||
Sbjct: 684 gtcatggtagcaacaacatttattgtatttggcaatatcttcctagtttcctttggtaat 743

                      
Query: 441 catcaatctcc 451
           |||||||||||
Sbjct: 744 catcaatctcc 754
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>dbj|AK103390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127K21, full
           insert sequence
          Length = 1892

 Score =  186 bits (94), Expect = 6e-44
 Identities = 210/248 (84%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 135 gactcatggccgactggattataggagcgttgatcaatatcgtgggtagtgttgccataa 194
           ||||||||| ||||||| ||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 349 gactcatgggcgactgggttataggagcactgatcaacattgtggggagtgttgccataa 408

                                                                       
Query: 195 attttggtactaaccttctcaaattgggccatgatcagagagaaaagttgtactcaagta 254
           | |||||||| |||||||| ||||||||||||||||||||||| ||| | |   |||  |
Sbjct: 409 actttggtaccaaccttctgaaattgggccatgatcagagagagaagctttcgacaacca 468

                                                                       
Query: 255 a---caatcaagtcgatggcaaatttgtcccaaaatcagttatgtatttccagacttgga 311
           |   |||||||| | ||| ||||||||| |  || ||||||||| |||| || |||||||
Sbjct: 469 acaacaatcaaggcaatgacaaatttgttcagaagtcagttatgcattttcaaacttgga 528

                                                                       
Query: 312 gaataggtatactctttttcgctgtggggaactgcctaaacttcatgtccttcgcatatg 371
           ||||||| ||||| || || |||| ||| |||||||| ||||||||||||||||||||||
Sbjct: 529 gaataggcatactgttctttgctgcgggaaactgcctcaacttcatgtccttcgcatatg 588

                   
Query: 372 ccgcacag 379
           ||||||||
Sbjct: 589 ccgcacag 596



 Score =  137 bits (69), Expect = 5e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                        
Query: 453  ggagtggagagacaattctttcagataatgcaaaagatactagcacacattggcgaacac 512
            |||||||||| || ||  |||| |||| ||| ||| ||||| || |||||||||| ||| 
Sbjct: 859  ggagtggagaaactatcatttcggatagtgcgaaacatactggctcacattggcggacat 918

                                                                        
Query: 513  tgctgcccttttcttacgctatcgtatctggtgccattgggtcttgctccgtcttgtttg 572
            || |||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||
Sbjct: 919  tgttgccattttcttatgctattgtatctggtgctattggatcttgttctgtcttatttg 978

                                                             
Query: 573  cgaaatcattgtctaacatgctgaggctgaccatgagcagcagatacca 621
            | ||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 979  caaaatcattgtcaaacatgctgaggctaacaatgagcagcagatacca 1027



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 381 gtcatggttgccacaacttttattgtctttggcaatgtcttcttggtttccttcggcaat 440
           |||||||| || ||||| |||||||| ||||||||| ||||| | |||||||| || |||
Sbjct: 684 gtcatggtagcaacaacatttattgtatttggcaatatcttcctagtttcctttggtaat 743

                      
Query: 441 catcaatctcc 451
           |||||||||||
Sbjct: 744 catcaatctcc 754
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>gb|AY109525.1| Zea mays CL5474_1 mRNA sequence
          Length = 1000

 Score =  137 bits (69), Expect = 5e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 495 gcacacattggcgaacactgctgcccttttcttacgctatcgtatctggtgccattgggt 554
           ||||| ||||||||||| || |||| |||||||| ||| | ||||||||||| |||||||
Sbjct: 984 gcacatattggcgaacaatgttgccattttcttatgctgttgtatctggtgctattgggt 925

                                                                       
Query: 555 cttgctccgtcttgtttgcgaaatcattgtctaacatgctgaggctgaccatgagcagca 614
           ||||||| ||||||||||| || ||||||||||||||| |||||||||| |||| |||||
Sbjct: 924 cttgctcagtcttgtttgcaaagtcattgtctaacatgatgaggctgactatgaacagca 865

                
Query: 615 gatac 619
           |||||
Sbjct: 864 gatac 860
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 135      gactcatggccgactggattataggagcgttgatcaatatcgtgggtagtgttgccataa 194
                ||||||||| ||||||| ||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 18850034 gactcatgggcgactgggttataggagcactgatcaacattgtggggagtgttgccataa 18849975

                                                      
Query: 195      attttggtactaaccttctcaaattgggccatgatcag 232
                | |||||||| |||||||| ||||||||||||||||||
Sbjct: 18849974 actttggtaccaaccttctgaaattgggccatgatcag 18849937



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                            
Query: 453      ggagtggagagacaattctttcagataatgcaaaagatactagcacacattggcgaacac 512
                |||||||||| || ||  |||| |||| ||| ||| ||||| || |||||||||| ||| 
Sbjct: 18848019 ggagtggagaaactatcatttcggatagtgcgaaacatactggctcacattggcggacat 18847960

                                                                            
Query: 513      tgctgcccttttcttacgctatcgtatctggtgccattgggtcttgctccgtcttgtttg 572
                || |||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||
Sbjct: 18847959 tgttgccattttcttatgctattgtatctggtgctattggatcttgttctgtcttatttg 18847900

                            
Query: 573      cgaaatcattgt 584
                | ||||||||||
Sbjct: 18847899 caaaatcattgt 18847888



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                 
Query: 332      gctgtggggaactgcctaaacttcatgtccttcgcatatgccgcacagg 380
                |||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 18849344 gctgcgggaaactgcctcaacttcatgtccttcgcatatgccgcacagg 18849296



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                            
Query: 381      gtcatggttgccacaacttttattgtctttggcaatgtcttcttggtttccttcggcaat 440
                |||||||| || ||||| |||||||| ||||||||| ||||| | |||||||| || |||
Sbjct: 18848742 gtcatggtagcaacaacatttattgtatttggcaatatcttcctagtttcctttggtaat 18848683

                           
Query: 441      catcaatctcc 451
                |||||||||||
Sbjct: 18848682 catcaatctcc 18848672



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                            
Query: 254      aacaatcaagtcgatggcaaatttgtcccaaaatcagttatgtatttccagacttggaga 313
                |||||||||| | ||| ||||||||| || || ||||||||| |||| || |||||||||
Sbjct: 18849517 aacaatcaaggcaatgacaaatttgttccgaagtcagttatgcattttcaaacttggaga 18849458

                       
Query: 314      ataggta 320
                |||||||
Sbjct: 18849457 ataggta 18849451



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 587      aacatgctgaggctgaccatgagcagcagatacca 621
                |||||||||||||| || |||||||||||||||||
Sbjct: 18847776 aacatgctgaggctaacaatgagcagcagatacca 18847742
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>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa257A21
          Length = 34833

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                         
Query: 135   gactcatggccgactggattataggagcgttgatcaatatcgtgggtagtgttgccataa 194
             ||||||||| ||||||| ||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 34276 gactcatgggcgactgggttataggagcactgatcaacattgtggggagtgttgccataa 34217

                                                   
Query: 195   attttggtactaaccttctcaaattgggccatgatcag 232
             | |||||||| |||||||| ||||||||||||||||||
Sbjct: 34216 actttggtaccaaccttctgaaattgggccatgatcag 34179



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                         
Query: 453   ggagtggagagacaattctttcagataatgcaaaagatactagcacacattggcgaacac 512
             |||||||||| || ||  |||| |||| ||| ||| ||||| || |||||||||| ||| 
Sbjct: 32261 ggagtggagaaactatcatttcggatagtgcgaaacatactggctcacattggcggacat 32202

                                                                         
Query: 513   tgctgcccttttcttacgctatcgtatctggtgccattgggtcttgctccgtcttgtttg 572
             || |||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||
Sbjct: 32201 tgttgccattttcttatgctattgtatctggtgctattggatcttgttctgtcttatttg 32142

                         
Query: 573   cgaaatcattgt 584
             | ||||||||||
Sbjct: 32141 caaaatcattgt 32130



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 332   gctgtggggaactgcctaaacttcatgtccttcgcatatgccgcacagg 380
             |||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 33586 gctgcgggaaactgcctcaacttcatgtccttcgcatatgccgcacagg 33538



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 381   gtcatggttgccacaacttttattgtctttggcaatgtcttcttggtttccttcggcaat 440
             |||||||| || ||||| |||||||| ||||||||| ||||| | |||||||| || |||
Sbjct: 32984 gtcatggtagcaacaacatttattgtatttggcaatatcttcctagtttcctttggtaat 32925

                        
Query: 441   catcaatctcc 451
             |||||||||||
Sbjct: 32924 catcaatctcc 32914



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 254   aacaatcaagtcgatggcaaatttgtcccaaaatcagttatgtatttccagacttggaga 313
             |||||||||| | ||| ||||||||| || || ||||||||| |||| || |||||||||
Sbjct: 33759 aacaatcaaggcaatgacaaatttgttccgaagtcagttatgcattttcaaacttggaga 33700

                    
Query: 314   ataggta 320
             |||||||
Sbjct: 33699 ataggta 33693



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 587   aacatgctgaggctgaccatgagcagcagatacca 621
             |||||||||||||| || |||||||||||||||||
Sbjct: 32018 aacatgctgaggctaacaatgagcagcagatacca 31984
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>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461D06
          Length = 112895

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                         
Query: 135   gactcatggccgactggattataggagcgttgatcaatatcgtgggtagtgttgccataa 194
             ||||||||| ||||||| ||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 13567 gactcatgggcgactgggttataggagcactgatcaacattgtggggagtgttgccataa 13508

                                                   
Query: 195   attttggtactaaccttctcaaattgggccatgatcag 232
             | |||||||| |||||||| ||||||||||||||||||
Sbjct: 13507 actttggtaccaaccttctgaaattgggccatgatcag 13470



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                         
Query: 453   ggagtggagagacaattctttcagataatgcaaaagatactagcacacattggcgaacac 512
             |||||||||| || ||  |||| |||| ||| ||| ||||| || |||||||||| ||| 
Sbjct: 11552 ggagtggagaaactatcatttcggatagtgcgaaacatactggctcacattggcggacat 11493

                                                                         
Query: 513   tgctgcccttttcttacgctatcgtatctggtgccattgggtcttgctccgtcttgtttg 572
             || |||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||||
Sbjct: 11492 tgttgccattttcttatgctattgtatctggtgctattggatcttgttctgtcttatttg 11433

                         
Query: 573   cgaaatcattgt 584
             | ||||||||||
Sbjct: 11432 caaaatcattgt 11421



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 332   gctgtggggaactgcctaaacttcatgtccttcgcatatgccgcacagg 380
             |||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 12877 gctgcgggaaactgcctcaacttcatgtccttcgcatatgccgcacagg 12829



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 381   gtcatggttgccacaacttttattgtctttggcaatgtcttcttggtttccttcggcaat 440
             |||||||| || ||||| |||||||| ||||||||| ||||| | |||||||| || |||
Sbjct: 12275 gtcatggtagcaacaacatttattgtatttggcaatatcttcctagtttcctttggtaat 12216

                        
Query: 441   catcaatctcc 451
             |||||||||||
Sbjct: 12215 catcaatctcc 12205



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 254   aacaatcaagtcgatggcaaatttgtcccaaaatcagttatgtatttccagacttggaga 313
             |||||||||| | ||| ||||||||| || || ||||||||| |||| || |||||||||
Sbjct: 13050 aacaatcaaggcaatgacaaatttgttccgaagtcagttatgcattttcaaacttggaga 12991

                    
Query: 314   ataggta 320
             |||||||
Sbjct: 12990 ataggta 12984



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 587   aacatgctgaggctgaccatgagcagcagatacca 621
             |||||||||||||| || |||||||||||||||||
Sbjct: 11309 aacatgctgaggctaacaatgagcagcagatacca 11275
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>ref|NM_113578.3| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
           AT3G26670.1 mRNA, complete cds
          Length = 1794

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 261 agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 318
to top
>ref|NM_202638.1| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
           AT3G26670.3 mRNA, complete cds
          Length = 1851

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 318 agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 375
to top
>ref|NM_180303.1| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
           AT3G26670.2 mRNA, complete cds
          Length = 1953

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 420 agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 477
to top
>gb|AY093129.1| Arabidopsis thaliana unknown protein (At3g26670) mRNA, complete cds
          Length = 1791

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 261 agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 318
to top
>gb|BT006587.1| Arabidopsis thaliana At3g26670 mRNA, complete cds
          Length = 1326

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 43  agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 100
to top
>emb|BX824813.1|CNS0A6OZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1788

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 182 agtgttgccataaattttggtactaaccttctcaaattgggccatgatcagagagaaa 239
           |||||||| || |||||||| || ||||||||||||||||| ||| || |||||||||
Sbjct: 318 agtgttgctattaattttggcacaaaccttctcaaattgggacataatgagagagaaa 375
to top
>emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence
          Length = 81493

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 182   agtgttgccataaattttggtactaaccttctcaaattggg 222
             |||||||| || |||||||| || |||||||||||||||||
Sbjct: 52707 agtgttgctattaattttggcacaaaccttctcaaattggg 52667
to top
>emb|X56114.1|ATTAR10 A.thaliana target DNA 10
          Length = 552

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 182 agtgttgccataaattttggtactaaccttctcaaattggg 222
           |||||||| || |||||||| || |||||||||||||||||
Sbjct: 19  agtgttgctattaattttggcacaaaccttctcaaattggg 59
to top
>dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLJ15
          Length = 43481

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 182   agtgttgccataaattttggtactaaccttctcaaattggg 222
             |||||||| || |||||||| || |||||||||||||||||
Sbjct: 10468 agtgttgctattaattttggcacaaaccttctcaaattggg 10428
to top
>emb|BX649279.7| Zebrafish DNA sequence from clone CH211-212D10 in linkage group 22,
              complete sequence
          Length = 124384

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 397    cttttattgtctttggcaatgtc 419
              |||||||||||||||||||||||
Sbjct: 115651 cttttattgtctttggcaatgtc 115673
to top
>gb|AC123072.4| Mus musculus BAC clone RP23-87D8 from chromosome 1, complete sequence
          Length = 248675

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    gatggcaaatttgtcccaaaa 286
              |||||||||||||||||||||
Sbjct: 180494 gatggcaaatttgtcccaaaa 180514
to top
>ref|XM_863035.1| PREDICTED: Canis familiaris similar to DNA mismatch repair protein
            Mlh3 (MutL protein homolog 3), transcript variant 5
            (LOC480389), mRNA
          Length = 4524

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  gaccatgagcagcagatacca 621
            |||||||||||||||||||||
Sbjct: 4336 gaccatgagcagcagatacca 4356
to top
>ref|XM_537511.2| PREDICTED: Canis familiaris similar to DNA mismatch repair protein
            Mlh3 (MutL protein homolog 3), transcript variant 1
            (LOC480389), mRNA
          Length = 4620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  gaccatgagcagcagatacca 621
            |||||||||||||||||||||
Sbjct: 4432 gaccatgagcagcagatacca 4452
to top
>ref|XM_863029.1| PREDICTED: Canis familiaris similar to DNA mismatch repair protein
            Mlh3 (MutL protein homolog 3), transcript variant 4
            (LOC480389), mRNA
          Length = 4092

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  gaccatgagcagcagatacca 621
            |||||||||||||||||||||
Sbjct: 3904 gaccatgagcagcagatacca 3924
to top
>ref|XM_863026.1| PREDICTED: Canis familiaris similar to DNA mismatch repair protein
            Mlh3 (MutL protein homolog 3), transcript variant 3
            (LOC480389), mRNA
          Length = 4548

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 601  gaccatgagcagcagatacca 621
            |||||||||||||||||||||
Sbjct: 4360 gaccatgagcagcagatacca 4380
to top
>emb|AL109934.22|HSDJ81L22 Human DNA sequence from clone RP1-81L22 on chromosome 6, complete
            sequence
          Length = 95347

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  atttgtcccaaaatcagttat 294
            |||||||||||||||||||||
Sbjct: 7928 atttgtcccaaaatcagttat 7908
to top
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1,
            complete sequence
          Length = 114771

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 600  tgaccatgagcagcagatacc 620
            |||||||||||||||||||||
Sbjct: 9963 tgaccatgagcagcagatacc 9983
to top
>ref|XM_577460.1| PREDICTED: Rattus norvegicus similar to Ski protein (LOC364448),
           mRNA
          Length = 1074

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 589 catgctgaggctgaccatgagcagc 613
           ||||| |||||||||||||||||||
Sbjct: 967 catgcagaggctgaccatgagcagc 991
to top
>ref|NM_178804.2| Mus musculus slit homolog 2 (Drosophila) (Slit2), mRNA
          Length = 6083

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ttttattgtctttggcaatg 417
            ||||||||||||||||||||
Sbjct: 5372 ttttattgtctttggcaatg 5391
to top
>gb|BC059267.1| Mus musculus slit homolog 2 (Drosophila), mRNA (cDNA clone
            IMAGE:6410513), partial cds
          Length = 4125

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ttttattgtctttggcaatg 417
            ||||||||||||||||||||
Sbjct: 3399 ttttattgtctttggcaatg 3418
to top
>gb|AC133212.2| Mus musculus chromosome UNK clone RP23-45E17, complete sequence
          Length = 141857

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   ttttattgtctttggcaatg 417
             ||||||||||||||||||||
Sbjct: 41761 ttttattgtctttggcaatg 41780
to top
>emb|AL591667.7| Human DNA sequence from clone RP11-389N9 on chromosome 6, complete
            sequence
          Length = 15019

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   aaaataaacacttccagttg 44
            ||||||||||||||||||||
Sbjct: 9859 aaaataaacacttccagttg 9878
to top
>emb|AL049589.15|HSJ570L12 Human DNA sequence from clone RP4-570L12 on chromosome Xq13.1-21.1
             Contains the PGK1 gene for phosphoglycerate kinase 1, the
             TAF9L gene for TAF9-like RNA polymerase II TATA box
             binding protein (TBP)-associated factor 31kDa, a novel
             pseudogene and a CpG island, complete sequence
          Length = 143508

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   aacttttattgtctttggca 414
             ||||||||||||||||||||
Sbjct: 73351 aacttttattgtctttggca 73370
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>gb|AC101004.6| Mus musculus, clone RP23-79E5, complete sequence
          Length = 220468

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    ttttattgtctttggcaatg 417
              ||||||||||||||||||||
Sbjct: 143764 ttttattgtctttggcaatg 143745
to top
>emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0042I07,
             complete sequence
          Length = 129198

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ataatgcaaaagatactagc 496
             ||||||||||||||||||||
Sbjct: 25800 ataatgcaaaagatactagc 25819
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>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186968

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   tatttccagacttggagaat 315
             ||||||||||||||||||||
Sbjct: 83515 tatttccagacttggagaat 83496
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>dbj|AK220505.1| Mus musculus mRNA for mKIAA4141 protein
          Length = 5762

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ttttattgtctttggcaatg 417
            ||||||||||||||||||||
Sbjct: 5607 ttttattgtctttggcaatg 5626
to top
>ref|XM_925841.1| PREDICTED: Homo sapiens similar to TBP-associated factor 9L
            (LOC653068), mRNA
          Length = 6660

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  aacttttattgtctttggca 414
            ||||||||||||||||||||
Sbjct: 5627 aacttttattgtctttggca 5608
to top
>gb|AC015943.7| Homo sapiens chromosome 17, clone RP11-581B19, complete sequence
          Length = 161958

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   tatctggtgccattgggtct 556
             ||||||||||||||||||||
Sbjct: 64299 tatctggtgccattgggtct 64318
to top
>gb|AC099008.1| Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone
              BACR16G12, complete sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    ttttattgtctttggcaatg 417
              ||||||||||||||||||||
Sbjct: 149135 ttttattgtctttggcaatg 149116
to top
>gb|S75476.1| PGK1=phosphoglycerate kinase 1 {3' nuclease-sensitive region} [human,
            Genomic, 3571 nt]
          Length = 3571

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 395  aacttttattgtctttggca 414
            ||||||||||||||||||||
Sbjct: 1041 aacttttattgtctttggca 1060
to top
>gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
             BACR13P15, complete sequence
          Length = 171222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ttttattgtctttggcaatg 417
             ||||||||||||||||||||
Sbjct: 18100 ttttattgtctttggcaatg 18081
to top
>gb|AF144628.1|AF144628 Mus musculus SLIT2 (Slit2) mRNA, complete cds
          Length = 6083

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ttttattgtctttggcaatg 417
            ||||||||||||||||||||
Sbjct: 5372 ttttattgtctttggcaatg 5391
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 477      ataatgcaaaagatactagc 496
                ||||||||||||||||||||
Sbjct: 17935521 ataatgcaaaagatactagc 17935540
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 202      tactaaccttctcaaattgg 221
                ||||||||||||||||||||
Sbjct: 29428756 tactaaccttctcaaattgg 29428737
to top
>gb|AC068943.4| Homo sapiens BAC clone RP11-769M2 from 2, complete sequence
          Length = 72719

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    caaaataaacacttccagtt 43
             ||||||||||||||||||||
Sbjct: 72682 caaaataaacacttccagtt 72701
to top
>gb|AC110770.4| Homo sapiens BAC clone RP11-159P15 from 2, complete sequence
          Length = 81099

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   caaaataaacacttccagtt 43
            ||||||||||||||||||||
Sbjct: 1963 caaaataaacacttccagtt 1982
to top
>gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, complete sequence
          Length = 173058

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 467   attctttcagataatgcaaa 486
             ||||||||||||||||||||
Sbjct: 49904 attctttcagataatgcaaa 49885
to top
>gb|AC016889.28| Homo sapiens chromosome 17, clone RP11-506G7, complete sequence
          Length = 187723

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   caatgtcttcttggtttcct 432
             ||||||||||||||||||||
Sbjct: 66179 caatgtcttcttggtttcct 66160
to top
>dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21
          Length = 78369

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   tgtttgcgaaatcattgtct 586
             ||||||||||||||||||||
Sbjct: 40360 tgtttgcgaaatcattgtct 40379
to top
>dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M13
          Length = 42563

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 567  tgtttgcgaaatcattgtct 586
            ||||||||||||||||||||
Sbjct: 8415 tgtttgcgaaatcattgtct 8396
to top
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   tactaaccttctcaaattgg 221
             ||||||||||||||||||||
Sbjct: 91678 tactaaccttctcaaattgg 91659
to top
>gb|AC153883.6| Mus musculus 10 BAC RP23-368G20 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 181524

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cttgttggaggagtatgcca 104
             ||||||||||||||||||||
Sbjct: 19125 cttgttggaggagtatgcca 19106
to top
>gb|AC153368.5| Mus musculus 10 BAC RP23-269H21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 163268

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     cttgttggaggagtatgcca 104
              ||||||||||||||||||||
Sbjct: 111605 cttgttggaggagtatgcca 111586
to top
>gb|AE003817.3| Drosophila melanogaster chromosome 2R, section 33 of 73 of the complete
              sequence
          Length = 265472

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ttttattgtctttggcaatg 417
              ||||||||||||||||||||
Sbjct: 205086 ttttattgtctttggcaatg 205105
to top
>gb|AF074960.1|AF074960 Mus musculus neurogenic extracellular slit protein (Slit2) mRNA,
            partial cds
          Length = 5121

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  ttttattgtctttggcaatg 417
            ||||||||||||||||||||
Sbjct: 3638 ttttattgtctttggcaatg 3657
to top
>gb|AC005643.1|AC005643 Drosophila melanogaster, chromosome 2R, region 50C5-50C8, P1 clone
             DS02972, complete sequence
          Length = 80389

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ttttattgtctttggcaatg 417
             ||||||||||||||||||||
Sbjct: 39779 ttttattgtctttggcaatg 39760
to top
>emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, complete sequence
          Length = 40664

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   caaaatcagttatgtatttc 301
             ||||||||||||||||||||
Sbjct: 36912 caaaatcagttatgtatttc 36893
to top
>emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 map Xq28, complete
              sequence
          Length = 205943

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    aacttttattgtctttggca 414
              ||||||||||||||||||||
Sbjct: 147162 aacttttattgtctttggca 147181
to top
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04,
              complete sequence
          Length = 164645

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    ataatgcaaaagatactagc 496
              ||||||||||||||||||||
Sbjct: 132276 ataatgcaaaagatactagc 132295
to top
>emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on chromosome 4, complete
             sequence
          Length = 113877

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 479   aatgcaaaagatactagcacacattggc 506
             ||||||||  ||||||||||||||||||
Sbjct: 99780 aatgcaaagaatactagcacacattggc 99753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,787,492
Number of Sequences: 3902068
Number of extensions: 5787492
Number of successful extensions: 110676
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110457
Number of HSP's gapped (non-prelim): 219
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top