| Clone Name | baal21d12 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 95.1 bits (235), Expect = 4e-20 Identities = 46/61 (75%), Positives = 49/61 (80%) Frame = +3 Query: 27 SRTFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIE 206 + TFGIPIPEWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVT EKATSL IE Sbjct: 768 AETFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLSSASVDDAAVIE 827 Query: 207 E 209 E Sbjct: 828 E 828
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 94.7 bits (234), Expect = 6e-20 Identities = 46/61 (75%), Positives = 49/61 (80%) Frame = +3 Query: 27 SRTFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIE 206 + TFGIPI EWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVTDEKATSL IE Sbjct: 768 AETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLSSASVDDAAVIE 827 Query: 207 E 209 E Sbjct: 828 E 828
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 63.5 bits (153), Expect = 1e-10 Identities = 30/61 (49%), Positives = 42/61 (68%) Frame = +3 Query: 27 SRTFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIE 206 + +FG+ IPEWAK +KL A+ V+++ VP F+PKQGV IVTDEKA++L IE Sbjct: 771 AESFGVAIPEWAKDTSKL-ADVVNKIAVPTFEPKQGVNIVTDEKASNLSSTSVDDVAVIE 829 Query: 207 E 209 + Sbjct: 830 D 830
>PMD1_SCHPO (P36619) Leptomycin B resistance protein pmd1| Length = 1362 Score = 29.3 bits (64), Expect = 2.9 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -2 Query: 151 SVTILTPCFGWKSGTITLSTA 89 SVTIL+ GWK G +TLST+ Sbjct: 928 SVTILSLATGWKLGLVTLSTS 948
>VP23_SHV21 (Q01008) Probable capsid protein VP23 (Gene 26 protein)| Length = 304 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 157 FSSVTILTPCFGWKSGTITLSTASADSLFGVLAHSGMG---IPKVLL 26 FS++T++ P FG + T+TL + D +F + S + I K+LL Sbjct: 108 FSNLTVIPPVFGRQQATVTLESNGFDLVFPSVVPSDLAQAIIGKLLL 154
>SYI_HALSA (Q9HN97) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1070 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 15 NIEGSRTFGIPIPEWAKTPNKLSAEAVDRVIV 110 N+ R +GIP+P W TP S +A D ++V Sbjct: 457 NVSRQRYWGIPVPIW--TPEDWSGDAEDVLVV 486
>YFJD_BACSU (O31555) Hypothetical lipoprotein yfjD precursor| Length = 185 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 42 IPIPEWAKTPNKLSAEAVDRVIVP 113 I IP W PN L EAV+R I+P Sbjct: 130 IRIPTWNIIPNPLFFEAVERYILP 153
>FUMC_RICPR (Q9ZCQ4) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 461 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 36 FGIPIPEWAKTPNKLSAEAVDRVIVPD 116 +GI + E AK N LS E D+++VP+ Sbjct: 431 YGITLKEAAKKLNFLSEEEFDKIVVPE 457 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,959,937 Number of Sequences: 219361 Number of extensions: 518510 Number of successful extensions: 1755 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1738 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1754 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)