>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Plus

                                                                            
Query: 54       tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
                |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 13206021 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 13206080

                                                                            
Query: 114      ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
                 || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 13206081 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 13206140

                                        
Query: 174      tagtgaactcccggagcaatcaga 197
                ||||||| || |||||||||||||
Sbjct: 13206141 tagtgaagtcgcggagcaatcaga 13206164

>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
             from chromosome 3, complete sequence
          Length = 151173

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Minus

                                                                         
Query: 54    tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
             |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 20617 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 20558

                                                                         
Query: 114   ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
              || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 20557 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 20498

                                     
Query: 174   tagtgaactcccggagcaatcaga 197
             ||||||| || |||||||||||||
Sbjct: 20497 tagtgaagtcgcggagcaatcaga 20474

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Plus

                                                                            
Query: 54       tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
                |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 13202796 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 13202855

                                                                            
Query: 114      ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
                 || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 13202856 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 13202915

                                        
Query: 174      tagtgaactcccggagcaatcaga 197
                ||||||| || |||||||||||||
Sbjct: 13202916 tagtgaagtcgcggagcaatcaga 13202939

>dbj|AK119231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E03, full
            insert sequence
          Length = 2028

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Plus

                                                                        
Query: 54   tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
            |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 1556 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 1615

                                                                        
Query: 114  ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
             || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 1616 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 1675

                                    
Query: 174  tagtgaactcccggagcaatcaga 197
            ||||||| || |||||||||||||
Sbjct: 1676 tagtgaagtcgcggagcaatcaga 1699

>dbj|AK105418.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A10, full
            insert sequence
          Length = 2054

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Plus

                                                                        
Query: 54   tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
            |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 1556 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 1615

                                                                        
Query: 114  ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
             || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 1616 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 1675

                                    
Query: 174  tagtgaactcccggagcaatcaga 197
            ||||||| || |||||||||||||
Sbjct: 1676 tagtgaagtcgcggagcaatcaga 1699

>dbj|AK103394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127M16, full
            insert sequence
          Length = 2045

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Plus

                                                                        
Query: 54   tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
            |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 1558 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 1617

                                                                        
Query: 114  ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
             || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 1618 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 1677

                                    
Query: 174  tagtgaactcccggagcaatcaga 197
            ||||||| || |||||||||||||
Sbjct: 1678 tagtgaagtcgcggagcaatcaga 1701

>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
              from chromosome 3, complete sequence
          Length = 149539

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 115/144 (79%)
 Strand = Plus / Minus

                                                                          
Query: 54     tgaggaagtggtcagcagtgaccggactgctgcggccattaaagccattgcaggaattat 113
              |||||||| ||| ||||||||| | |||||||| ||||| ||||| || || ||||| ||
Sbjct: 113820 tgaggaaggggtgagcagtgacagaactgctgccgccatgaaagcgatagcgggaataat 113761

                                                                          
Query: 114    ttcttcacagcaaactatgaatatcccctgccagaaggaatttggcaggaatggtgaaga 173
               || ||||||||    |||||| | || ||||| |||||||||||    | |  ||||||
Sbjct: 113760 ctcatcacagcagcagatgaatgttccttgccaaaaggaatttggtgtaactaatgaaga 113701

                                      
Query: 174    tagtgaactcccggagcaatcaga 197
              ||||||| || |||||||||||||
Sbjct: 113700 tagtgaagtcgcggagcaatcaga 113677

>emb|AL139101.13| Human DNA sequence from clone RP3-414L4 on chromosome 6 Contains the 3'
             end of the TIAM2 gene for T-cell lymphoma invasion and
             metastasis 2 (SIF and Tiam 1-like exchange factor (STEF)),
             the CLDN20 gene for claudin 20, the TFB1M gene for
             transcription factor B1, mitochondrial (CGI-75 protein
             homolog of yeast mitochondrial transcription factor BCGI75
             (mtTFB, CGI-75)), the 5' end of a novel gene and two CpG
             islands, complete sequence
          Length = 116256

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 111   tatttcttcacagcaaactatgaata 136
             |||||||||||||||||||| |||||
Sbjct: 59881 tatttcttcacagcaaactaagaata 59856

>gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
              BACR37K05, complete sequence
          Length = 197597

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 423    accttaagttctagttggattt 444
              ||||||||||||||||||||||
Sbjct: 157185 accttaagttctagttggattt 157206

>gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13 of 118 of the complete
              sequence
          Length = 315844

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 423    accttaagttctagttggattt 444
              ||||||||||||||||||||||
Sbjct: 263604 accttaagttctagttggattt 263625

>gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, complete sequence
          Length = 169739

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 215   gaaaggctagcaatcctgcatgagaaaga 243
             |||||||| | ||||||||||||||||||
Sbjct: 13631 gaaaggcttgaaatcctgcatgagaaaga 13659

>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence
          Length = 253013

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 215   gaaaggctagcaatcctgcatgagaaaga 243
             |||||||| | ||||||||||||||||||
Sbjct: 11548 gaaaggcttgaaatcctgcatgagaaaga 11520

>emb|AL954338.5| Human DNA sequence from clone RP11-111I7 on chromosome 1 Contains part
             of a novel gene (FLJ10986), complete sequence
          Length = 44274

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   ttcacagcaaactatgaatat 137
             |||||||||||||||||||||
Sbjct: 27040 ttcacagcaaactatgaatat 27020

>emb|AL929346.5| Zebrafish DNA sequence from clone DKEY-38P12, complete sequence
          Length = 232537

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 405    aaacatctgtttttgttcacc 425
              |||||||||||||||||||||
Sbjct: 144906 aaacatctgtttttgttcacc 144926

>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence
          Length = 216041

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    tcaaaacatctgtttttgtt 421
              ||||||||||||||||||||
Sbjct: 128567 tcaaaacatctgtttttgtt 128548

>gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qtel, complete sequence
          Length = 78545

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gagagatctggtgaggaagt 62
             ||||||||||||||||||||
Sbjct: 59187 gagagatctggtgaggaagt 59206

>gb|AC112919.5| Homo sapiens X BAC RP11-294J19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 82410

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   gaggaagtggtcagcagtga 74
            ||||||||||||||||||||
Sbjct: 2292 gaggaagtggtcagcagtga 2273

>gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 183437

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gaggaagtggtcagcagtga 74
             ||||||||||||||||||||
Sbjct: 84644 gaggaagtggtcagcagtga 84625

>emb|BX511157.10| Zebrafish DNA sequence from clone DKEY-197M14 in linkage group 5,
             complete sequence
          Length = 159528

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tatcaaaacatctgtttttg 419
             ||||||||||||||||||||
Sbjct: 26515 tatcaaaacatctgtttttg 26534

>emb|AL954308.12| Zebrafish DNA sequence from clone DKEY-13J15 in linkage group 4,
             complete sequence
          Length = 223608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 402   tcaaaacatctgtttttgttcaccttaa 429
             |||||||| || ||||||||||||||||
Sbjct: 83603 tcaaaacagctatttttgttcaccttaa 83576

>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gagagatctggtgaggaagt 62
             ||||||||||||||||||||
Sbjct: 53673 gagagatctggtgaggaagt 53654

>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     gcaatcagaccttctggttg 208
               ||||||||||||||||||||
Sbjct: 3055058 gcaatcagaccttctggttg 3055039

>dbj|AP005713.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB262G12, complete
             sequence
          Length = 126698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gagagatctggtgaggaagt 62
             ||||||||||||||||||||
Sbjct: 73946 gagagatctggtgaggaagt 73927


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,932,867
Number of Sequences: 3902068
Number of extensions: 3932867
Number of successful extensions: 73082
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72983
Number of HSP's gapped (non-prelim): 99
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)