ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 Score = 1199 bits (605), Expect = 0.0 Identities = 607/608 (99%) Strand = Plus / Plus Query: 1 ggccgcgtcgggctcgccaagtccacccgccgcgacgtcgccgtccaggccaaggggtcc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 ggccgcgtcgggctcgccaagtccacccgccgcgacgtcgccgtccaggccaaggggtcc 93 Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 153 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 213 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 273 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 333 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 393 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 453 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 454 agcctcccgccccacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgcc 513 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 573 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 633 Query: 601 cacctggc 608 |||||||| Sbjct: 634 cacctggc 641
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 620 bits (313), Expect = e-174 Identities = 498/560 (88%) Strand = Plus / Plus Query: 47 aggccaaggggtcctggctccccggcctccagtcccctgcctacctcgacggcagtctgg 106 ||||||||||| |||||||||||||||| || || |||||||| ||||||| || Sbjct: 205 aggccaagggggagtggctccccggcctcccttctcccacctacctcaacggcagcttgc 264 Query: 107 cgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctgcggtggt 166 | || || || || || |||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 265 caggcgataacgggttcgacccgttgggtctggcggaggacccggagaacctgcggtggt 324 Query: 167 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatgctga 226 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 325 tcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgc 384 Query: 227 tcccggaggtgctgaccaaggcggggctgctgaacgcgcccgagtggtacgacgccggca 286 | || ||||||||||| ||| ||| || | ||||||| |||||||||||||||||| Sbjct: 385 tgcctgaggtgctgacgaagatcgggttgatcgacgcgccgcagtggtacgacgccggca 444 Query: 287 aggagacctacttcgcctcctcctccacgctcttcgtcatcgagttcatcctcttccact 346 ||| ||||||||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 445 aggccacctacttcgcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccact 504 Query: 347 acgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggacccca 406 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 505 acgtggagatccggcggtggcaggacatcaagaaccctggctgcgtcaaccaggacccca 564 Query: 407 tcttcaagagctacagcctcccgccccacgagtgcggctaccccggcancgtcttcaacc 466 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 565 tcttcaagagctacagcctcccgccgcacgagtgcggctaccccggcagcgtcttcaacc 624 Query: 467 ccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagactgg 526 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 625 ccctcaacttcgagcccaccctcgaggccaaggagaaggagctcgccaacgggaggctgg 684 Query: 527 ccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcg 586 | |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 685 cgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcg 744 Query: 587 agaacctgcagcagcacctg 606 | ||||||| |||||||||| Sbjct: 745 acaacctgctgcagcacctg 764
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 210 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 269 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 329 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 330 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 389 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 390 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 449 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 450 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 509 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 510 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 569 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 570 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 629 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 630 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 689 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 690 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 749 Query: 601 cacctg 606 |||||| Sbjct: 750 cacctg 755
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 601 cacctg 606 |||||| Sbjct: 754 cacctg 759
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 601 cacctg 606 |||||| Sbjct: 754 cacctg 759
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1178 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 211 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 270 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 330 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 331 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 390 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 391 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 450 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 451 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 510 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 511 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 570 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 571 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 630 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 631 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 690 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 691 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 750 Query: 601 cacctg 606 |||||| Sbjct: 751 cacctg 756
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1188 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 210 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 269 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 329 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 330 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 389 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 390 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 449 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 450 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 509 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 510 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 569 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 570 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 629 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 630 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 689 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 690 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 749 Query: 601 cacctg 606 |||||| Sbjct: 750 cacctg 755
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1191 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 213 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 272 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 273 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 332 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 333 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 392 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 393 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 452 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 453 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 512 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 513 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 572 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 573 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 632 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 633 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 692 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 693 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 752 Query: 601 cacctg 606 |||||| Sbjct: 753 cacctg 758
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 601 cacctg 606 |||||| Sbjct: 754 cacctg 759
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 211 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 270 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 271 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 330 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 331 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 390 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 391 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 450 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 451 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 510 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 511 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 570 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 571 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 630 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 631 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 690 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 691 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 750 Query: 601 cacctg 606 |||||| Sbjct: 751 cacctg 756
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 617 bits (311), Expect = e-173 Identities = 487/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 214 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 273 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 274 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 333 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 334 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 393 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 394 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 453 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 454 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 513 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 514 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 573 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 574 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 633 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 634 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 693 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 694 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 753 Query: 601 cacctg 606 |||||| Sbjct: 754 cacctg 759
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 609 bits (307), Expect = e-171 Identities = 486/546 (89%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 212 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 271 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 272 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcgggg 331 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 332 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 391 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 392 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 451 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 452 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 511 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 512 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 571 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 572 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 631 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 632 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 691 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 692 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 751 Query: 601 cacctg 606 |||||| Sbjct: 752 cacctg 757
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 597 bits (301), Expect = e-167 Identities = 430/472 (91%), Gaps = 1/472 (0%) Strand = Plus / Minus Query: 136 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 195 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 439 Query: 196 tgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctg 255 |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||| || Sbjct: 438 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgacgaagatcgggttg 379 Query: 256 ctgaacgcgcccgagtggtacgacgccggcaaggagacctacttcgcctcctcctccacg 315 | ||||||| ||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 378 atcgacgcgccgcagtggtacgacgccggcaaggccacctacttcgcgtcgtcgtcgacg 319 Query: 316 ctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatc 375 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 318 ctgttcgtcatcgagttcatcctgttccactacgtggagatccggcggtggcaggacatc 259 Query: 376 aagaacccgggctccgtcaaccaggaccccatcttcaagagctacagcctcccgccccac 435 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 258 aagaaccctggctgcgtcaaccaggaccccatcttcaagagctacagcctcccgccgcac 199 Query: 436 gagtgcggctaccccggcancgtcttcaaccccctcaacttcgcccccaccctcgagaac 495 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 198 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgagcccaccctcgaggcc 139 Query: 496 aaggagaaggagctcgccaac-gggagactggccatgctggcgttcctggggttcctggt 554 ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| Sbjct: 138 aaggagaaggagctcgccaacagggaggctggcgatgctggcgttcttggggttcctggt 79 Query: 555 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacctg 606 ||||||||||||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 78 gcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcagcacctg 27
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 593 bits (299), Expect = e-166 Identities = 484/546 (88%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 215 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 274 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 275 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 334 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 335 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 394 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 395 acgaagatcgggttgatcgacgcgccacagtggtacgacaccggcaaggccacctacttc 454 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| ||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 455 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcccgttccactacgtggagatccgg 514 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 |||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 515 cggtggcaggacatcaaggaccctggctgcgtcaaccaggaccccatcttcaagagctac 574 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 575 agcctcccgccgcacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 634 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 635 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 694 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 695 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 754 Query: 601 cacctg 606 |||||| Sbjct: 755 cacctg 760
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 587 bits (296), Expect = e-164 Identities = 486/547 (88%), Gaps = 2/547 (0%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 190 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 249 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 250 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 309 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 310 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 369 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 370 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 429 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || || ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 430 gcgtcgtcgtcgacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgg 489 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 490 cggtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 549 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaa-ccccctcaacttcgc 479 ||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 550 agcctcccgccgcacgagtgcggcta-cccggcagcgtcttcaacccccctcaacttcga 608 Query: 480 ccccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgtt 539 |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 609 gcccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgtt 668 Query: 540 cctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagca 599 | |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||| Sbjct: 669 cttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgca 728 Query: 600 gcacctg 606 ||||||| Sbjct: 729 gcacctg 735
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 561 bits (283), Expect = e-157 Identities = 480/546 (87%) Strand = Plus / Plus Query: 61 tggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatggt 120 |||||||||||||||| || || |||||||| ||||||| || | || || || || Sbjct: 177 tggctccccggcctcccttctcccacctacctcaacggcagcttgccaggcgataacggg 236 Query: 121 tttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcggag 180 || |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 237 ttcgacccgttgggtctggcggaggacccggagaacctgcggtggttcgtgcaggcggag 296 Query: 181 ctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgctg 240 ||||||||||||||||||||||||||||||||||| ||||||||| | || ||||||||| Sbjct: 297 ctggtgaacgggcggtgggcgatgctgggggtggccgggatgctgctgcctgaggtgctg 356 Query: 241 accaaggcggggctgctgaacgcgcccgagtggtacgacgccggcaaggagacctacttc 300 || ||| ||| || | ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 357 acgaagatcgggttgatcgacgcgccgcagtggtacgacgccggcaaggccacctacttc 416 Query: 301 gcctcctcctccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccgg 360 || || || |||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 417 gcgtcgtcgaacacgctgttcgtcatcgagttcatcctgttccactacgtggagatccgc 476 Query: 361 cggtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctac 420 | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 477 cagtggcaggacatcaagaaccctggctgcgtcaaccaggaccccatcttcaagagctac 536 Query: 421 agcctcccgccccacgagtgcggctaccccggcancgtcttcaaccccctcaacttcgcc 480 || ||||| | ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 537 agactccccagcgacgagtgcggctaccccggcagcgtcttcaaccccctcaacttcgag 596 Query: 481 cccaccctcgagaacaaggagaaggagctcgccaacgggagactggccatgctggcgttc 540 |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 597 cccaccctcgaggccaaggagaaggagctcgccaacgggaggctggcgatgctggcgttc 656 Query: 541 ctggggttcctggtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcag 600 |||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||| Sbjct: 657 ttggggttcctggtgcagcacaacgtgacgcagaaggggcccttcgacaacctgctgcag 716 Query: 601 cacctg 606 |||||| Sbjct: 717 cacctg 722
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 939 nt] Length = 939 Score = 529 bits (267), Expect = e-147 Identities = 317/327 (96%), Gaps = 5/327 (1%) Strand = Plus / Plus Query: 1 ggccgcgtcgggctcgccaag-tccacccgccgcgacgtcgccgtccaggccaaggggtc 59 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 45 ggccgcgtcgggctcgccaaggtccacccgccgcgacgtcgccgtccaggccaaggggtc 104 Query: 60 ctggctccccggcctccagtcccctgcctacctcgacggcagtctggcgggtgacaatgg 119 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 105 ctggctccccggcctccagtcccctgcctacctagacggcagtctggagggtgacaatgg 164 Query: 120 ttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcgga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 ttttgacccgctggcgctggcggaggacccggaggacctgcggtggttcgtgcaggcgga 224 Query: 180 gctggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 cgtggtgaacgggcggtgggcgatgctgggggtggcggggatgctgatcccggaggtgct 284 Query: 240 gaccaaggcggggctgctgaacgcgcccgagtgg-tacgac-gcc-ggcaaggagaccta 296 |||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| Sbjct: 285 gaccaaggcggggctgatgaacgcgcccgagtggttacgactgccaggcaaggagaccta 344 Query: 297 cttcgcctcctcctccac-gctcttcg 322 |||||||||||||||||| |||||||| Sbjct: 345 cttcgcctcctcctccactgctcttcg 371 Score = 466 bits (235), Expect = e-128 Identities = 257/264 (97%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 345 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ctacgtcgagatccggcggtggcaggacatcaagaacccgggctccgtcaaccaggaccc 449 Query: 405 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcancgtcttcaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 450 catcttcaagagctacagcctcccgccccacgagtgcggctaccccggcagagtcttcaa 509 Query: 465 ccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacgggagact 524 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 510 ccccctcaacttcgccc---ccctcgagaacaaggagaaggagctcgccaacgggagact 566 Query: 525 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaaggggccgtt 584 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 567 ggccatgctggcgttcctggggttcctggtgcagcacaacgtgcacgggaaggggccgtt 626 Query: 585 cgagaacctgcagcagcacctggc 608 |||||||||||||||||||||||| Sbjct: 627 cgagaacctgcagcagcacctggc 650
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 507 bits (256), Expect = e-140 Identities = 351/383 (91%) Strand = Plus / Minus Query: 136 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 195 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21165033 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 21164974 Query: 196 tgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctg 255 |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||| || Sbjct: 21164973 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgacgaagatcgggttg 21164914 Query: 256 ctgaacgcgcccgagtggtacgacgccggcaaggagacctacttcgcctcctcctccacg 315 | ||||||| ||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 21164913 atcgacgcgccgcagtggtacgacgccggcaaggccacctacttcgcgtcgtcgtcgacg 21164854 Query: 316 ctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatc 375 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 21164853 ctgttcgtcatcgagttcatcctgttccactacgtggagatccggcggtggcaggacatc 21164794 Query: 376 aagaacccgggctccgtcaaccaggaccccatcttcaagagctacagcctcccgccccac 435 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 21164793 aagaaccctggctgcgtcaaccaggaccccatcttcaagagctacagcctcccgccgcac 21164734 Query: 436 gagtgcggctaccccggcancgtcttcaaccccctcaacttcgcccccaccctcgagaac 495 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 21164733 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgagcccaccctcgaggcc 21164674 Query: 496 aaggagaaggagctcgccaacgg 518 ||||||||||||||||||||||| Sbjct: 21164673 aaggagaaggagctcgccaacgg 21164651 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 517 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 576 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 21164559 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 21164500 Query: 577 gggccgttcgagaacctgcagcagcacctg 606 ||||| ||||| ||||||| |||||||||| Sbjct: 21164499 gggcccttcgacaacctgctgcagcacctg 21164470
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 507 bits (256), Expect = e-140 Identities = 351/383 (91%) Strand = Plus / Minus Query: 136 ctggcggaggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 195 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136243 ctggcggaggacccggagaacctgcggtggttcgtgcaggcggagctggtgaacgggcgg 136184 Query: 196 tgggcgatgctgggggtggcggggatgctgatcccggaggtgctgaccaaggcggggctg 255 |||||||||||||||||||| ||||||||| | || ||||||||||| ||| ||| || Sbjct: 136183 tgggcgatgctgggggtggccgggatgctgctgcctgaggtgctgacgaagatcgggttg 136124 Query: 256 ctgaacgcgcccgagtggtacgacgccggcaaggagacctacttcgcctcctcctccacg 315 | ||||||| ||||||||||||||||||||| ||||||||||| || || || ||| Sbjct: 136123 atcgacgcgccgcagtggtacgacgccggcaaggccacctacttcgcgtcgtcgtcgacg 136064 Query: 316 ctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatc 375 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 136063 ctgttcgtcatcgagttcatcctgttccactacgtggagatccggcggtggcaggacatc 136004 Query: 376 aagaacccgggctccgtcaaccaggaccccatcttcaagagctacagcctcccgccccac 435 |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136003 aagaaccctggctgcgtcaaccaggaccccatcttcaagagctacagcctcccgccgcac 135944 Query: 436 gagtgcggctaccccggcancgtcttcaaccccctcaacttcgcccccaccctcgagaac 495 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | Sbjct: 135943 gagtgcggctaccccggcagcgtcttcaaccccctcaacttcgagcccaccctcgaggcc 135884 Query: 496 aaggagaaggagctcgccaacgg 518 ||||||||||||||||||||||| Sbjct: 135883 aaggagaaggagctcgccaacgg 135861 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 517 gggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaag 576 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 135769 gggaggctggcgatgctggcgttcttggggttcctggtgcagcacaacgtgacgcagaag 135710 Query: 577 gggccgttcgagaacctgcagcagcacctg 606 ||||| ||||| ||||||| |||||||||| Sbjct: 135709 gggcccttcgacaacctgctgcagcacctg 135680
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 157 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 216 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 16234223 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 16234282 Query: 217 gggatgctgatcccggaggtgctg 240 ||||| ||| |||||||||||||| Sbjct: 16234283 gggatcctggtcccggaggtgctg 16234306
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 157 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 216 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 50739 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 50798 Query: 217 gggatgctgatcccggaggtgctg 240 ||||| ||| |||||||||||||| Sbjct: 50799 gggatcctggtcccggaggtgctg 50822
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 157 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 216 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 138824 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 138883 Query: 217 gggatgctgatcccggaggtgctg 240 ||||| ||| |||||||||||||| Sbjct: 138884 gggatcctggtcccggaggtgctg 138907
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 157 ctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcg 216 ||||||||||||| ||||||||||||| || || | |||||||||||||||| ||||||| Sbjct: 346 ctgcggtggttcgcgcaggcggagctgatgcacagccggtgggcgatgctggcggtggcg 405 Query: 217 gggatgctgatcccggaggtgctg 240 ||||| ||| |||||||||||||| Sbjct: 406 gggatcctggtcccggaggtgctg 429
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) Length = 1013 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 163 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 222 |||| ||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 269 tggtacgtccaggcggagctagtgaacgggaggtgggcgatgctgggcgtggcggggatg 328 Query: 223 ctgatcccggaggtgctgacca 244 || |||||||| ||||| |||| Sbjct: 329 cttatcccggaagtgctaacca 350 Score = 67.9 bits (34), Expect = 4e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 458 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 517 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 564 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 623 Query: 518 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 577 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 624 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 683 Query: 578 ggccgttcga 587 | |||||||| Sbjct: 684 gcccgttcga 693
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein of light-harvesting complex of photosystem I) (partial) Length = 968 Score = 91.7 bits (46), Expect = 3e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 163 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 222 |||| ||| ||||||||||| ||||||||| | |||||||||||||| |||||||||||| Sbjct: 246 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 305 Query: 223 ctgatcccggaggtgctgacca 244 || |||||||| ||||| |||| Sbjct: 306 cttatcccggaagtgctaacca 327 Score = 67.9 bits (34), Expect = 4e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 458 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 517 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| | Sbjct: 541 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaatg 600 Query: 518 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 577 ||||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 601 ggagattggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 660 Query: 578 ggccgttcga 587 | |||||||| Sbjct: 661 gcccgttcga 670
>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein Length = 726 Score = 85.7 bits (43), Expect = 2e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 310 tccacgctcttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcag 369 ||||| || ||||| |||||||||||| | |||||||||||||||||| | ||||||| Sbjct: 262 tccaccctgttcgtgatcgagttcatcttgttccactacgtcgagatcagaaggtggcaa 321 Query: 370 gacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctacagc 423 |||||||||||||| || || ||||| | |||||||||||||| ||||||| Sbjct: 322 gacatcaagaacccaggaagtgttaaccaagnccccatcttcaagaactacagc 375
>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein type 4 Length = 819 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 163 tggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcggggatg 222 |||| ||| ||||||||||| ||||||||| | |||||||||||||| |||||||||||| Sbjct: 277 tggtacgtccaggcggagctagtgaacgggagatgggcgatgctgggcgtggcggggatg 336 Query: 223 ctgatcccggaggtgctgacca 244 | |||||||| ||||| |||| Sbjct: 337 cntatcccggaagtgctaacca 358 Score = 52.0 bits (26), Expect = 0.002 Identities = 104/130 (80%) Strand = Plus / Plus Query: 458 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaacg 517 |||||||||| ||||||||| |||| || | ||| ||||||||||||||| ||||| | Sbjct: 572 tcttcaacccgctcaacttctccccatccatggaggccaaggagaaggagcttgccaatg 631 Query: 518 ggagactggccatgctggcgttcctggggttcctggtgcagcacaacgtgaccgggaagg 577 |||| |||| ||| | || |||||||| || | ||||| ||||| || || || |||| Sbjct: 632 ggaggttggcaatgttagcattcctgggatttgtagtgcaacacaatgtaacaggaaagg 691 Query: 578 ggccgttcga 587 | |||||||| Sbjct: 692 gcccgttcga 701
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 290 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 349 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 350 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 392
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 291 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 350 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 351 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 393
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 293 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 352 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 353 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 395
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 356 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 398
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 356 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 398
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 300 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 359 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 360 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 23304695 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 23304754 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 23304755 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 23304797 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 22389326 cgacgtcgccgtccaggcca 22389307 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 cgccaagtccacccgccgcgacgtcgcc 42 ||||||| || ||||||||||||||||| Sbjct: 7637021 cgccaaggccgcccgccgcgacgtcgcc 7637048
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 59953 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 60012 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 60013 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 60055
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 311 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 370 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 371 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 413
>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene Length = 1393 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 325 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaacccg 384 |||||||||||| | |||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 805 atcgagttcatcttgttccactacgtcgagatcagaaggtggcaagacattaagaaccca 864 Query: 385 ggctccgtcaaccaggaccccatcttcaagagctacagc 423 || |||||||| ||||| |||||||||| ||||||| Sbjct: 865 ggaagtgtcaaccaagaccctatcttcaagaactacagc 903 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 553 gtgcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagcacct 605 ||||||||||| ||||| |||||||| || || || ||||| | ||||||||| Sbjct: 1110 gtgcagcacaatgtgactgggaagggaccttttgacaaccttctgcagcacct 1162
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 297 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 356 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 357 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 399
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 327 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 386 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 387 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 429
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 293 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 352 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 353 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 395
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 296 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 355 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 356 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 398
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 290 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 349 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 350 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 392
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 291 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 350 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 351 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 393
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 478 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 537 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 538 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 580
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 144 ggacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgat 203 |||||||||| | |||||||| ||||||||||||||||||| || | ||||||||||| Sbjct: 300 ggacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgat 359 Query: 204 gctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 |||||| | |||||| || | ||||||||| | ||||||||| Sbjct: 360 gctgggcgcggcgggcatcttcatcccggagttcctgaccaag 402
>emb|X84308.1|HVLHCA2 H.vulgare mRNA for photosysteme I antenna protein Length = 1050 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 145 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 204 ||||||||| | |||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 321 gacccggagagcttgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 380 Query: 205 ctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 ||||| | |||||| || | ||||| ||| ||||||||||| Sbjct: 381 ctgggcgcggcgggcatcttcatcccagagctgctgaccaag 422
>gb|AY105356.1| Zea mays PCO075138 mRNA sequence Length = 1317 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 145 gacccggaggacctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatg 204 ||||||||| |||||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 444 gacccggagagcctgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatg 503 Query: 205 ctgggggtggcggggatgctgatcccggaggtgctgaccaag 246 || || | |||||| || | ||||||||| | ||||||||| Sbjct: 504 ctcggcgcggcgggcatcttcatcccggagtttctgaccaag 545
>emb|X79277.1|LTLHAB L.temulentum lhaB mRNA Length = 1026 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 158 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 217 |||||||| ||||||||||||||||||| || | |||||||||||||| || | ||||| Sbjct: 290 tgcggtggaacgtgcaggcggagctggtgcactgccggtgggcgatgcttggagcggcgg 349 Query: 218 ggatgctgatcccggaggtgctgaccaag 246 |||| | ||||||||| | ||||||||| Sbjct: 350 ggatcttcatcccggagctcctgaccaag 378
>emb|X57707.1|LECAB12 L.esculentum DNA for Cab12 gene Length = 1493 Score = 61.9 bits (31), Expect = 2e-06 Identities = 100/123 (81%) Strand = Plus / Plus Query: 100 agtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacctg 159 ||||| |||||||||||||||||||| || ||| || |||||||| |||||| || || Sbjct: 608 agtcttgcgggtgacaatggttttgatccattgggactcgcggaggatccggagaacttg 667 Query: 160 cggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgggg 219 | ||||| || ||||| ||||| |||||||| || ||||| ||| |||| || || ||| Sbjct: 668 agatggtttgttcaggctgagctagtgaacggtcgatgggctatgttgggtgttgcaggg 727 Query: 220 atg 222 ||| Sbjct: 728 atg 730
>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4) mRNA, complete cds Length = 1266 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 464 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 523 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 524 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 583 Query: 216 ggggatgct 224 |||||||| Sbjct: 584 tgggatgct 592 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 687 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 746 Query: 379 aaccc 383 ||||| Sbjct: 747 aaccc 751
>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 891 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 204 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 263 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 264 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 323 Query: 216 ggggatgct 224 |||||||| Sbjct: 324 tgggatgct 332 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 427 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 486 Query: 379 aaccc 383 ||||| Sbjct: 487 aaccc 491
>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor homolog (At3g47470) mRNA, complete cds Length = 1055 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 304 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 363 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 364 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 423 Query: 216 ggggatgct 224 |||||||| Sbjct: 424 tgggatgct 432 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 527 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 586 Query: 379 aaccc 383 ||||| Sbjct: 587 aaccc 591
>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 294 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 353 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 354 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 413 Query: 216 ggggatgct 224 |||||||| Sbjct: 414 tgggatgct 422 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 517 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 576 Query: 379 aaccc 383 ||||| Sbjct: 577 aaccc 581
>emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 291 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 350 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 351 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 410 Query: 216 ggggatgct 224 |||||||| Sbjct: 411 tgggatgct 419 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 514 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 573 Query: 379 aaccc 383 ||||| Sbjct: 574 aaccc 578
>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 278 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 337 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 338 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 397 Query: 216 ggggatgct 224 |||||||| Sbjct: 398 tgggatgct 406 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 501 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 560 Query: 379 aaccc 383 ||||| Sbjct: 561 aaccc 565
>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence Length = 1267 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 465 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 524 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 525 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 584 Query: 216 ggggatgct 224 |||||||| Sbjct: 585 tgggatgct 593 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 688 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 747 Query: 379 aaccc 383 ||||| Sbjct: 748 aaccc 752
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 158 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 217 |||||||| |||||||||||| || ||| || | ||||||||||||||||| | ||||| Sbjct: 281 tgcggtggaacgtgcaggcggatcttgtgcactgccggtgggcgatgctgggcgcggcgg 340 Query: 218 ggatgctgatcccggaggtgctgaccaag 246 | || | ||||||||| | ||||||||| Sbjct: 341 gcatcttcatcccggagttcctgaccaag 369
>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding protein (Cab4) mRNA, complete cds Length = 1050 Score = 58.0 bits (29), Expect = 4e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 96 cggcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggagga 155 ||||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| | Sbjct: 274 cggcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaa 333 Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 | || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || Sbjct: 334 cttgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgc 393 Query: 216 ggggatgct 224 |||||||| Sbjct: 394 tgggatgct 402 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 497 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 556 Query: 379 aaccc 383 ||||| Sbjct: 557 aaccc 561
>gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 201 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 244 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 458 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 515 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV chlorophyll binding protein (LHCA4) gene, partial cds; nuclear gene for chloroplast product Length = 521 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 201 gatgctgggggtggcggggatgctgatcccggaggtgctgacca 244 ||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct: 4 gatgctgggcgtggcggggatgcttatcccggaagtgctaacca 47 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 458 tcttcaaccccctcaacttcgcccccaccctcgagaacaaggagaaggagctcgccaa 515 |||||||||| ||||||||| |||| || | ||| ||||||||||||||||||||| Sbjct: 261 tcttcaaccctctcaacttctccccatccatggaggccaaggagaaggagctcgccaa 318
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 54.0 bits (27), Expect = 6e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 98 gcagtctggcgggtgacaatggttttgacccgctggcgctggcggaggacccggaggacc 157 ||||||| || ||||||||||| ||||||||| ||| || || ||||| || ||| || Sbjct: 7689 gcagtcttgccggtgacaatgggtttgacccgttgggtctagcagaggatccagagaact 7630 Query: 158 tgcggtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggcgg 217 || |||||||| ||||| |||||||| ||||| || ||||| ||||| || || || | Sbjct: 7629 tgaaatggttcgtccaggcagagctggtcaacggacgatgggctatgctcggtgtcgctg 7570 Query: 218 ggatgct 224 ||||||| Sbjct: 7569 ggatgct 7563 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 7389 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 7330 Query: 379 aaccc 383 ||||| Sbjct: 7329 aaccc 7325
>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein (cab11 gene) Length = 1062 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 162 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 |||||| ||||| || |||||||||||||| || ||||| ||||| |||||||| Sbjct: 381 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 434 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 495 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 554 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 714 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 773 Query: 555 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagca 602 ||| ||||| ||||| || |||||||| || || ||||| | |||||| Sbjct: 774 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagca 821 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 328 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 383 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 547 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 602
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 256 ctgaacgcgcccgagtggtacgacgccggcaagg 289 ||||||| ||| |||||||||||||||||||||| Sbjct: 835 ctgaacgtgcctgagtggtacgacgccggcaagg 868
>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds Length = 1008 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 162 gtggttcgtgcaggcggagctggtgaacgggcggtgggcgatgctgggggtggc 215 |||||| ||||| || |||||||||||||| || ||||| ||||| |||||||| Sbjct: 297 gtggtttgtgcaagccgagctggtgaacggccgatgggcaatgctaggggtggc 350 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 495 caaggagaaggagctcgccaacgggagactggccatgctggcgttcctggggttcctggt 554 ||||||||||||||| || || |||||| |||| ||| |||| ||| | || ||| | || Sbjct: 630 caaggagaaggagcttgctaatgggagattggcaatgttggcattcttaggattcattgt 689 Query: 555 gcagcacaacgtgaccgggaaggggccgttcgagaacctgcagcagca 602 ||| ||||| ||||| || |||||||| || || ||||| | |||||| Sbjct: 690 gcaacacaatgtgactggaaaggggccttttgataaccttctgcagca 737 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 328 gagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 383 ||||||||| | |||||||| || ||||| || | |||||||||||||||||||| Sbjct: 463 gagttcatcttattccactatgtggagataaggagatggcaggacatcaagaaccc 518
>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA, partial cds; nuclear gene for chloroplast product Length = 476 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 363 gtggcaggacatcaagaacccgggctccgtcaaccaggaccccatcttcaagagctacag 422 ||||||||||||||||||||| || || |||||||| ||||| ||||||| |||||| Sbjct: 1 gtggcaggacatcaagaacccaggaagtgtgaaccaggatcccattttcaagaactacag 60 Query: 423 c 423 | Sbjct: 61 c 61
>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete cds Length = 715 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 319 ttcgtcatcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaag 378 ||||| ||||||||||| | || || ||||| |||||| | |||||||| ||||||||| Sbjct: 144 ttcgtgatcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaag 203 Query: 379 aaccc 383 ||||| Sbjct: 204 aaccc 208
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 cctgcggtggttcgtgcaggcggagctggtgaacgg 191 ||||||||||| ||||||||| ||||||||| |||| Sbjct: 198 cctgcggtggtacgtgcaggctgagctggtgcacgg 233
>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence Length = 405 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 325 atcgagttcatcctcttccactacgtcgagatccggcggtggcaggacatcaagaaccc 383 ||||||||||| | || || ||||| |||||| | |||||||| |||||||||||||| Sbjct: 82 atcgagttcatattgtttcattacgttgagatcagacggtggcaagacatcaagaaccc 140
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 255 gctgaacgcgcccgagtggtacgacgccggcaagg 289 |||||||| ||| |||||||||||||| ||||||| Sbjct: 346 gctgaacgtgccggagtggtacgacgctggcaagg 380
>dbj|AB112468.1| Chlamydomonas reinhardtii iar1 gene for Iar1 InvA related Kinesin, exon 1-23, complete cds Length = 8900 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 142 gaggacccggaggacctgcggtg 164 ||||||||||||||||||||||| Sbjct: 6391 gaggacccggaggacctgcggtg 6413
>ref|XM_747159.1| Aspergillus fumigatus Af293 septin (Afu1g08850) partial mRNA Length = 1041 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 cacgctcttcgtcatcgagttc 333 |||||||||||||||||||||| Sbjct: 682 cacgctcttcgtcatcgagttc 661
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 23 ccacccgccgcgacgtcgccgtccag 48 |||||||||||| ||||||||||||| Sbjct: 301280 ccacccgccgcgtcgtcgccgtccag 301255
>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 508 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 346 tacgtcgagatccggcggtggcaggacatcaagaaccc 383 ||||| |||||| | |||||||| |||||||||||||| Sbjct: 17 tacgttgagatcagacggtggcaagacatcaagaaccc 54
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 aggtgctgaccaaggcggggctgct 257 ||||||||||| ||||||||||||| Sbjct: 600685 aggtgctgaccgaggcggggctgct 600709
>emb|X91393.1|SADNAABAB S.antibioticus abaB gene Length = 1850 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggaggacccggaggacctg 159 ||||||||||||||||||||| Sbjct: 638 gcggaggacccggaggacctg 658
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 gagacctacttcgcctcctcctcca 313 ||||||| ||||||||||||||||| Sbjct: 323434 gagaccttcttcgcctcctcctcca 323410
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 acttcgcctcctcctccacgc 316 ||||||||||||||||||||| Sbjct: 116484 acttcgcctcctcctccacgc 116464
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 acttcgcctcctcctccacgc 316 ||||||||||||||||||||| Sbjct: 15262785 acttcgcctcctcctccacgc 15262765
>ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP00000012777 (LOC408740), mRNA Length = 1629 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 caccctcgagaacaaggagaa 503 ||||||||||||||||||||| Sbjct: 1002 caccctcgagaacaaggagaa 1022
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 atgctgggggtggcggggatg 222 ||||||||||||||||||||| Sbjct: 308 atgctgggggtggcggggatg 328
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 atgctgggggtggcggggatg 222 ||||||||||||||||||||| Sbjct: 646 atgctgggggtggcggggatg 666
>gb|AY107739.1| Zea mays PCO089350 mRNA sequence Length = 645 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 420 cagcctcccgccccacgagtgcggc 444 |||||||| |||||||||||||||| Sbjct: 286 cagcctccagccccacgagtgcggc 310
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccacccgccgcgacgtcgccg 43 ||||||||||||||||||||| Sbjct: 688896 ccacccgccgcgacgtcgccg 688916
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 acttcgcctcctcctccacgc 316 ||||||||||||||||||||| Sbjct: 15271026 acttcgcctcctcctccacgc 15271006
>ref|XM_514527.1| PREDICTED: Pan troglodytes ribosome binding protein 1 (LOC458109), mRNA Length = 7485 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 5809 cctcctcctccacgctcttc 5790
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 cgccaagtccacccgccgcgacgtcgcc 42 ||||||| || ||||||||||||||||| Sbjct: 776 cgccaaggccgcccgccgcgacgtcgcc 749
>ref|NM_002206.1| Homo sapiens integrin, alpha 7 (ITGA7), mRNA Length = 4079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 281 aggcggagctgatccacgggcggtgggcgatg 312
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 8374 ggaggacccggaggacctgc 8355
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 caaggagaaggagctcgcca 514 |||||||||||||||||||| Sbjct: 363839 caaggagaaggagctcgcca 363820
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggcggggctgctgaacgcgc 265 |||||||||||||||||||| Sbjct: 3493351 ggcggggctgctgaacgcgc 3493370
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 tcgcctcctcctccacgctc 318 |||||||||||||||||||| Sbjct: 669660 tcgcctcctcctccacgctc 669641
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 79464 gcggtgggcgatgctggggg 79445
>ref|NM_001844.3| Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 1, mRNA Length = 5060 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aggacccggaggacctgcgg 162 |||||||||||||||||||| Sbjct: 1231 aggacccggaggacctgcgg 1212
>ref|NM_033150.1| Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 2, mRNA Length = 4853 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aggacccggaggacctgcgg 162 |||||||||||||||||||| Sbjct: 1024 aggacccggaggacctgcgg 1005
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggcggggctgctgaacgcgc 265 |||||||||||||||||||| Sbjct: 529593 ggcggggctgctgaacgcgc 529612
>gb|BC069957.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone IMAGE:4502830), partial cds Length = 1982 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 836 ggaggacccggaggacctgc 817
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 180 gctggtgaacgggcggtgggcgatgctggggg 211 |||||||| |||||||||||| ||||||||| Sbjct: 1885374 gctggtgagggggcggtgggcggtgctggggg 1885343
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 137552 ggaggacccggaggacctgc 137533
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 21808352 gcggtgggcgatgctggggg 21808371
>ref|XM_548544.2| PREDICTED: Canis familiaris similar to solute carrier family 15, member 4 (LOC491423), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 ggcggagctggtgaacgggcggtg 197 ||||||||||| |||||||||||| Sbjct: 408 ggcggagctggcgaacgggcggtg 385
>ref|XM_980756.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>ref|XM_980302.1| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2459 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>ref|XM_898536.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 2 (Tmem16h), mRNA Length = 7202 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 3838 ggaggacccggaggacctgc 3857
>ref|XM_898544.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 3 (Tmem16h), mRNA Length = 7873 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 4509 ggaggacccggaggacctgc 4528
>ref|XM_889480.2| PREDICTED: Mus musculus transmembrane protein 16H, transcript variant 1 (Tmem16h), mRNA Length = 8182 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 4818 ggaggacccggaggacctgc 4837
>ref|XM_980411.1| PREDICTED: Mus musculus transmembrane protein 16H (Tmem16h), mRNA Length = 6658 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 3294 ggaggacccggaggacctgc 3313
>ref|XM_912953.2| PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 801 ggaggacccggaggacctgc 782
>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete sequence Length = 47325 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 ttcctggggttcctggtgcagcac 561 ||||||||||||||||||| |||| Sbjct: 32848 ttcctggggttcctggtgctgcac 32871
>ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01210) partial mRNA Length = 1432 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 caaggagaaggagctcgcca 514 |||||||||||||||||||| Sbjct: 1077 caaggagaaggagctcgcca 1096
>gb|BC020482.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:3919185) Length = 1638 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 1460 cctcctcctccacgctcttc 1441
>gb|BC000099.2| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:3509994), partial cds Length = 2069 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 1193 cctcctcctccacgctcttc 1174
>gb|BC034701.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone MGC:27873 IMAGE:3494430), complete cds Length = 1918 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 758 ggaggacccggaggacctgc 739
>gb|AY358882.1| Homo sapiens clone DNA55737 ITGA7 (UNQ406) mRNA, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2349 atgctgatcccggaggtgct 2330
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 107961 ggaggacccggaggacctgc 107942
>gb|BC080526.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog), mRNA (cDNA clone IMAGE:4561660) Length = 1951 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 1319 cctcctcctccacgctcttc 1300
>emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chromosome 1p11.1-13.3, complete sequence Length = 100643 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 28397 cctcctcctccacgctcttc 28378
>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the 5' end of the BFSP1 gene for beaded filament structural protein 1 (filensin), the DSTN gene for destrin (actin depolymerizing factor ADF), a ras-like pseudogene, the RRBP1 gene for ribosome binding protein 1 (dog 180 kDa homolog), the 5' end of the C20orf179 gene for chromosome 20 open reading frame 179 and two CpG islands, complete sequence Length = 166001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 67121 cctcctcctccacgctcttc 67140
>ref|NM_204790.1| Gallus gallus alpha 1 (V) collagen (LOC395568), mRNA Length = 5575 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggaggacccggaggacctg 159 |||||||||||||||||||| Sbjct: 3057 cggaggacccggaggacctg 3038
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggcggggctgctgaacgcgc 265 |||||||||||||||||||| Sbjct: 338249 ggcggggctgctgaacgcgc 338268
>gb|BC050280.1| Homo sapiens integrin, alpha 7, mRNA (cDNA clone MGC:33821 IMAGE:5284443), complete cds Length = 4130 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2534 atgctgatcccggaggtgct 2515
>emb|AL833822.1|HSM805097 Homo sapiens mRNA; cDNA DKFZp586A1420 (from clone DKFZp586A1420) Length = 2400 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 2223 cctcctcctccacgctcttc 2204
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 20137 aggcggagctgatccacgggcggtgggcgatg 20106
>gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, complete cds Length = 2781 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 ctggcgttcctggggttcctggtg 555 |||| ||||||||||||||||||| Sbjct: 1089 ctggtgttcctggggttcctggtg 1066
>gb|AC009779.18| Homo sapiens 12 BAC RP11-644F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 42716 atgctgatcccggaggtgct 42697
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tgggggtggcggggatgctg 225 |||||||||||||||||||| Sbjct: 145178 tgggggtggcggggatgctg 145159
>ref|NM_004587.1| Homo sapiens ribosome binding protein 1 homolog 180kDa (dog) (RRBP1), mRNA Length = 3106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 2228 cctcctcctccacgctcttc 2209
>dbj|AK093465.1| Homo sapiens cDNA FLJ36146 fis, clone TESTI2025117, highly similar to Homo sapiens ES/130 mRNA Length = 1648 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 793 cctcctcctccacgctcttc 774
>dbj|AK022548.1| Homo sapiens cDNA FLJ12486 fis, clone NT2RM2000566, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 3504 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 1922 atgctgatcccggaggtgct 1903
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 333 aggcggagctgatccacgggcggtgggcgatg 364
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 331 aggcggagctgatccacgggcggtgggcgatg 362
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 337 aggcggagctgatccacgggcggtgggcgatg 368
>dbj|AK149980.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530111L19 product:hypothetical protein, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 778 ggaggacccggaggacctgc 759
>dbj|AK160132.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500034J01 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 1916 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 796 ggaggacccggaggacctgc 777
>dbj|AK149117.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120484N02 product:weakly similar to Proline-rich protein MP-2 precursor [Mus musculus], full insert sequence Length = 1836 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 728 ggaggacccggaggacctgc 709
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 514 aacgggagactggccatgctggcgttcctggggttc 549 |||||| | ||||| |||||||||||| |||||||| Sbjct: 508 aacgggcggctggcgatgctggcgttcgtggggttc 543
>dbj|AK032966.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720482G04 product:hypothetical protein, full insert sequence Length = 1894 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 756 ggaggacccggaggacctgc 737
>dbj|AK006318.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700025A19 product:hypothetical protein, full insert sequence Length = 915 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 782 ggaggacccggaggacctgc 763
>ref|XM_393975.2| PREDICTED: Apis mellifera hypothetical LOC410496 (LOC410496), mRNA Length = 4959 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 cttcgcctcctcctccacgctctt 320 |||| ||||||||||||||||||| Sbjct: 1341 cttctcctcctcctccacgctctt 1318
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 22811362 aggcggagctgatccacgggcggtgggcgatg 22811331
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 8420595 cgacgtcgccgtccaggcca 8420614
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 21801381 gcggtgggcgatgctggggg 21801400
>gb|BC093523.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone MGC:103301 IMAGE:3711509), complete cds Length = 1897 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 741 ggaggacccggaggacctgc 722
>dbj|AB210036.1| Homo sapiens mRNA for ITGA7 variant protein, partial cds, clone: hk04261 Length = 4090 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2508 atgctgatcccggaggtgct 2489
>gb|AF072132.1|AF072132 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 3485 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2318 atgctgatcccggaggtgct 2299
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 50393 cgacgtcgccgtccaggcca 50374
>gb|BC079637.1| Mus musculus RIKEN cDNA 1500034J01 gene, mRNA (cDNA clone IMAGE:5719502) Length = 4517 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaggacccggaggacctgc 160 |||||||||||||||||||| Sbjct: 3365 ggaggacccggaggacctgc 3346
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 385 ggctccgtcaaccaggaccccatcttca 412 |||||||| |||||||||||||||||| Sbjct: 1058 ggctccgtggaccaggaccccatcttca 1085
>dbj|AK057949.1| Homo sapiens cDNA FLJ25220 fis, clone STM00558, highly similar to Homo sapiens integrin alpha-7 mRNA Length = 1965 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 383 atgctgatcccggaggtgct 364
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 acgggcggtgggcgatgctggggg 211 ||||||| |||||||||||||||| Sbjct: 479 acgggcgctgggcgatgctggggg 502
>dbj|AK109697.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F02, full insert sequence Length = 2370 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 1578 cgacgtcgccgtccaggcca 1597
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 517 aggcggagctgatccacgggcggtgggcgatg 486
>gb|AF137273.1|AF137273 Gallus gallus alpha 1 (V) collagen mRNA, complete cds Length = 5575 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggaggacccggaggacctg 159 |||||||||||||||||||| Sbjct: 3057 cggaggacccggaggacctg 3038
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 514 aacgggagactggccatgctggcgttcctggggttc 549 |||||| | ||||| |||||||||||| |||||||| Sbjct: 626 aacgggcggctggcgatgctggcgttcgtggggttc 661
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 343 aggcggagctgatccacgggcggtgggcgatg 374
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 cgccaagtccacccgccgcgacgtcgcc 42 ||||||| || ||||||||||||||||| Sbjct: 776 cgccaaggccgcccgccgcgacgtcgcc 749
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgcgacgtcgccgtccaggcc 51 ||||||| |||||||||||||||| Sbjct: 2461449 cgccgcgtcgtcgccgtccaggcc 2461472
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 351 gcggtgggcgatgctggggg 370
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 344 aggcggagctgatccacgggcggtgggcgatg 375
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 cgccaagtccacccgccgcgacgtcgcc 42 ||||||| || ||||||||||||||||| Sbjct: 142431 cgccaaggccgcccgccgcgacgtcgcc 142458
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 aggcggagctggtgaacgggcggtgggcgatg 204 ||||||||||| | ||||||||||||||||| Sbjct: 335 aggcggagctgatccacgggcggtgggcgatg 366
>emb|AJ228853.1|HSAJ8853 Homo sapiens ITGA7 gene, exon 18 Length = 247 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 100 atgctgatcccggaggtgct 81
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 314 cgctcttcgtcatcgagttcatcc 337 ||||||||||||||||| |||||| Sbjct: 4362320 cgctcttcgtcatcgaggtcatcc 4362343
>gb|AF032108.1|AF032108 Homo sapiens integrin alpha-7 mRNA, complete cds Length = 4079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 atgctgatcccggaggtgct 239 |||||||||||||||||||| Sbjct: 2479 atgctgatcccggaggtgct 2460
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 8420478 cgacgtcgccgtccaggcca 8420497
>gb|AF006751.1|AF006751 Homo sapiens ES/130 mRNA, complete cds Length = 3106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 2228 cctcctcctccacgctcttc 2209
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 cgacgtcgccgtccaggcca 52 |||||||||||||||||||| Sbjct: 27258 cgacgtcgccgtccaggcca 27277
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 340 gcggtgggcgatgctggggg 359
>emb|X16711.1|HSCOL2A1R H.sapiens COL2A1 mRNA for alpha1 (II) collagen Length = 3480 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aggacccggaggacctgcgg 162 |||||||||||||||||||| Sbjct: 867 aggacccggaggacctgcgg 848
>gb|M19529.1|PIGFSA Pig follistatin (FS) gene, complete cds Length = 6247 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 tcgcctcctcctccacgctc 318 |||||||||||||||||||| Sbjct: 2631 tcgcctcctcctccacgctc 2650
>dbj|AB037819.2| Homo sapiens mRNA for KIAA1398 protein, partial cds Length = 5468 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cctcctcctccacgctcttc 321 |||||||||||||||||||| Sbjct: 4191 cctcctcctccacgctcttc 4172
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcggtgggcgatgctggggg 211 |||||||||||||||||||| Sbjct: 332 gcggtgggcgatgctggggg 351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,708,704 Number of Sequences: 3902068 Number of extensions: 4708704 Number of successful extensions: 97771 Number of sequences better than 10.0: 189 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95883 Number of HSP's gapped (non-prelim): 1849 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
