ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20n20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 194 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 253 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 71436 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 71495 Query: 254 gactgcatcgacgactcggcccaccgcctc 283 |||||||||||||||| || ||||||||| Sbjct: 71496 gactgcatcgacgacttcgcgcaccgcctc 71525 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 332 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 391 |||||| |||||||||||||||||||||||||| ||||| |||| ||| | | |||||| Sbjct: 71577 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 71636 Query: 392 atgcgggcgcagcagatcggggagcggcg 420 |||| ||||||||||||||| |||||||| Sbjct: 71637 atgctggcgcagcagatcggcgagcggcg 71665 Score = 40.1 bits (20), Expect = 8.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||| |||||||||| | ||||||||| | ||| |||| ||||| Sbjct: 71353 tccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacct 71404
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 194 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 253 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27018148 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 27018207 Query: 254 gactgcatcgacgactcggcccaccgcctc 283 |||||||||||||||| || ||||||||| Sbjct: 27018208 gactgcatcgacgacttcgcgcaccgcctc 27018237 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||||||| |||||||||||||| || |||||| ||| |||| | Sbjct: 22459338 caagctgggcagcctcctcgcgcaggagtacaccctcatctccggcgtccacgacgacat 22459279 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22459278 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22459236 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 53 aagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctc 112 ||||||||| |||||||||| ||||||||||||||||| |||||| || |||| || Sbjct: 22565456 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22565515 Query: 113 cagtacatcaacgacgagctggccagcatgcagtccttcctc 154 |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22565516 cagtacatcaacgacgagctcgccagcatgcaggccttcctc 22565557 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 1 gatggagctggtggtgggagcttcggaggcgacgatgaagtccgtcatgggcaagctggg 60 ||||||| ||||||| || ||||||||||| || |||||| || || |||||||| |||| Sbjct: 16218438 gatggagttggtggtaggcgcttcggaggccaccatgaaggccctcctgggcaagttggg 16218497 Query: 61 cggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctccagtacat 120 ||||||||||||||||||| | || || |||| ||| ||||||| |||||||||| Sbjct: 16218498 aaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgacatccagtacat 16218557 Query: 121 caacgacgagctggccagcatgcagtccttcctc 154 || ||||||| |||||||||| || |||||||| Sbjct: 16218558 cagcgacgagatggccagcatccacgccttcctc 16218591 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 332 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 391 |||||| |||||||||||||||||||||||||| ||||| |||| ||| | | |||||| Sbjct: 27018289 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 27018348 Query: 392 atgcgggcgcagcagatcggggagcggcg 420 |||| ||||||||||||||| |||||||| Sbjct: 27018349 atgctggcgcagcagatcggcgagcggcg 27018377 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 209 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 |||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 16218640 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 16218699 Query: 269 tcggcccaccgcctcc 284 | |||||||| |||| Sbjct: 16218700 ttcgcccaccgtctcc 16218715 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||| || |||||||||||||| || |||||| || |||| | Sbjct: 22555137 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 22555196 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22555197 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22555239 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 211 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 269 |||||||||| ||||| | |||||| || |||||||||||||||||||||||||||||| Sbjct: 22524315 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 22524257 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 201 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 260 |||||| |||||||||||||||||||||||| ||| || |||| ||| | |||||||||| Sbjct: 27109172 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 27109231 Query: 261 tcgacgact 269 |||| |||| Sbjct: 27109232 tcgatgact 27109240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 27109088 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 27109139 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | ||| Sbjct: 22524470 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 22524411 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 | ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 22524410 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 22524363 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || |||||||||||||||||||| |||||||| Sbjct: 22555280 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 22555338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || ||||||||||||||||||| |||||||| Sbjct: 22459195 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 22459137 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||||||||||||| | ||| ||||||||| Sbjct: 25222729 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 25222681 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 26848613 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 26848562 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 26847825 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 26847876 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 26941577 cctacgacatcgaggactgcatcgac 26941552 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 26824965 cctacgacatcgaggactgcatcgac 26824940 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgact 269 ||||||| |||||||||||||||||||||| Sbjct: 8490511 cctacgatatcgaggactgcatcgacgact 8490482 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||| ||||||||| | ||| ||||||||| Sbjct: 25329375 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 25329327 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 gacatcgaggactgcatcgacga 267 ||||||||||||||||||||||| Sbjct: 23809092 gacatcgaggactgcatcgacga 23809114 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 227 atccgcgacatcacctacgacatcgaggactgcatcgac 265 ||||||||||| ||||||||||||||||| ||||||| Sbjct: 18333130 atccgcgacatgtcctacgacatcgaggacgccatcgac 18333092 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 23814058 cctacgacatcgaggattgcatcgac 23814083 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| | || || | ||||||||||| |||||||| ||||||| Sbjct: 22565601 aggactggatgaagcaggtgcgggaggtggcctacgacatcaaggactgcgtcgacga 22565658 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||| ||||||||||||||| Sbjct: 15213304 cctacgacatggaggactgcatcgac 15213279 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcat 261 |||||||||||||||||||||| Sbjct: 7260325 cctacgacatcgaggactgcat 7260346 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 ||||| |||||||||||||||||||| Sbjct: 6476936 cctaccacatcgaggactgcatcgac 6476961 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ggggagcggcgggagaggtacggggtcaa 438 |||||||||||| |||||||||| ||||| Sbjct: 24839923 ggggagcggcggcagaggtacggcgtcaa 24839951 Score = 40.1 bits (20), Expect = 8.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||| |||||||||| | ||||||||| | ||| |||| ||||| Sbjct: 27018065 tccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacct 27018116 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||| ||||||| ||||||||||| Sbjct: 19683446 cctacgacgtcgaggattgcatcgacga 19683473 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 tacgacatcgaggactgcatcgacgact 269 |||||||| ||||| ||||||||||||| Sbjct: 7992044 tacgacattgaggattgcatcgacgact 7992071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 catcgaggactgcatcgacg 266 |||||||||||||||||||| Sbjct: 6467681 catcgaggactgcatcgacg 6467662
>dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H03, full insert sequence Length = 2323 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 194 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 253 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 519 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 578 Query: 254 gactgcatcgacgactcggcccaccgcctc 283 |||||||||||||||| || ||||||||| Sbjct: 579 gactgcatcgacgacttcgcgcaccgcctc 608 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 332 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 391 |||||| |||||||||||||||||||||||||| ||||| |||| ||| | | |||||| Sbjct: 660 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 719 Query: 392 atgcgggcgcagcagatcggggagcggcg 420 |||| ||||||||||||||| |||||||| Sbjct: 720 atgctggcgcagcagatcggcgagcggcg 748 Score = 40.1 bits (20), Expect = 8.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||| |||||||||| | ||||||||| | ||| |||| ||||| Sbjct: 436 tccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacct 487
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 194 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 253 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27345201 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 27345260 Query: 254 gactgcatcgacgactcggcccaccgcctc 283 |||||||||||||||| || ||||||||| Sbjct: 27345261 gactgcatcgacgacttcgcgcaccgcctc 27345290 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||||||| |||||||||||||| || |||||| ||| |||| | Sbjct: 22769249 caagctgggcagcctcctcgcgcaggagtacaccctcatctccggcgtccacgacgacat 22769190 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22769189 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22769147 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 53 aagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctc 112 ||||||||| |||||||||| ||||||||||||||||| |||||| || |||| || Sbjct: 22875367 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22875426 Query: 113 cagtacatcaacgacgagctggccagcatgcagtccttcctc 154 |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22875427 cagtacatcaacgacgagctcgccagcatgcaggccttcctc 22875468 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 1 gatggagctggtggtgggagcttcggaggcgacgatgaagtccgtcatgggcaagctggg 60 ||||||| ||||||| || ||||||||||| || |||||| || || |||||||| |||| Sbjct: 16308420 gatggagttggtggtaggcgcttcggaggccaccatgaaggccctcctgggcaagttggg 16308479 Query: 61 cggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctccagtacat 120 ||||||||||||||||||| | || || |||| ||| ||||||| |||||||||| Sbjct: 16308480 aaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgacatccagtacat 16308539 Query: 121 caacgacgagctggccagcatgcagtccttcctc 154 || ||||||| |||||||||| || |||||||| Sbjct: 16308540 cagcgacgagatggccagcatccacgccttcctc 16308573 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 332 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 391 |||||| |||||||||||||||||||||||||| ||||| |||| ||| | | |||||| Sbjct: 27345342 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 27345401 Query: 392 atgcgggcgcagcagatcggggagcggcg 420 |||| ||||||||||||||| |||||||| Sbjct: 27345402 atgctggcgcagcagatcggcgagcggcg 27345430 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 209 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 |||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 16308622 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 16308681 Query: 269 tcggcccaccgcctcc 284 | |||||||| |||| Sbjct: 16308682 ttcgcccaccgtctcc 16308697 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||| || |||||||||||||| || |||||| || |||| | Sbjct: 22865048 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 22865107 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 22865108 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22865150 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 211 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 269 |||||||||| ||||| | |||||| || |||||||||||||||||||||||||||||| Sbjct: 22834226 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 22834168 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 201 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 260 |||||| |||||||||||||||||||||||| ||| || |||| ||| | |||||||||| Sbjct: 27436225 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 27436284 Query: 261 tcgacgact 269 |||| |||| Sbjct: 27436285 tcgatgact 27436293 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 27436141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 27436192 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | ||| Sbjct: 22834381 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 22834322 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 | ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 22834321 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 22834274 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || |||||||||||||||||||| |||||||| Sbjct: 22865191 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 22865249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || ||||||||||||||||||| |||||||| Sbjct: 22769106 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 22769048 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||||||||||||| | ||| ||||||||| Sbjct: 25541387 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 25541339 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 27175666 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 27175615 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 27174878 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 27174929 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 27268630 cctacgacatcgaggactgcatcgac 27268605 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 27152133 cctacgacatcgaggactgcatcgac 27152108 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgact 269 ||||||| |||||||||||||||||||||| Sbjct: 8561274 cctacgatatcgaggactgcatcgacgact 8561245 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||| ||||||||| | ||| ||||||||| Sbjct: 25648045 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 25647997 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 gacatcgaggactgcatcgacga 267 ||||||||||||||||||||||| Sbjct: 24120761 gacatcgaggactgcatcgacga 24120783 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 227 atccgcgacatcacctacgacatcgaggactgcatcgac 265 ||||||||||| ||||||||||||||||| ||||||| Sbjct: 18492531 atccgcgacatgtcctacgacatcgaggacgccatcgac 18492493 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 24125727 cctacgacatcgaggattgcatcgac 24125752 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| | || || | ||||||||||| |||||||| ||||||| Sbjct: 22875512 aggactggatgaagcaggtgcgggaggtggcctacgacatcaaggactgcgtcgacga 22875569 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||| ||||||||||||||| Sbjct: 15294803 cctacgacatggaggactgcatcgac 15294778 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcat 261 |||||||||||||||||||||| Sbjct: 7330411 cctacgacatcgaggactgcat 7330432 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 ||||| |||||||||||||||||||| Sbjct: 6543403 cctaccacatcgaggactgcatcgac 6543428 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ggggagcggcgggagaggtacggggtcaa 438 |||||||||||| |||||||||| ||||| Sbjct: 25151593 ggggagcggcggcagaggtacggcgtcaa 25151621 Score = 40.1 bits (20), Expect = 8.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||| |||||||||| | ||||||||| | ||| |||| ||||| Sbjct: 27345118 tccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacct 27345169 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||| ||||||| ||||||||||| Sbjct: 19969303 cctacgacgtcgaggattgcatcgacga 19969330 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 tacgacatcgaggactgcatcgacgact 269 |||||||| ||||| ||||||||||||| Sbjct: 8062131 tacgacattgaggattgcatcgacgact 8062158 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 catcgaggactgcatcgacg 266 |||||||||||||||||||| Sbjct: 6534148 catcgaggactgcatcgacg 6534129
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||||||| |||||||||||||| || |||||| ||| |||| | Sbjct: 16483 caagctgggcagcctcctcgcgcaggagtacaccctcatctccggcgtccacgacgacat 16424 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 16423 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 16381 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 53 aagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctc 112 ||||||||| |||||||||| ||||||||||||||||| |||||| || |||| || Sbjct: 122601 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 122660 Query: 113 cagtacatcaacgacgagctggccagcatgcagtccttcctc 154 |||||||||||||||||||| |||||||||||| |||||||| Sbjct: 122661 cagtacatcaacgacgagctcgccagcatgcaggccttcctc 122702 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||| || |||||||||||||| || |||||| || |||| | Sbjct: 112282 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 112341 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 112342 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 112384 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 211 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 269 |||||||||| ||||| | |||||| || |||||||||||||||||||||||||||||| Sbjct: 81460 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 81402 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | ||| Sbjct: 81615 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 81556 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 | ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 81555 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 81508 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || |||||||||||||||||||| |||||||| Sbjct: 112425 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 112483 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || ||||||||||||||||||| |||||||| Sbjct: 16340 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 16282 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| | || || | ||||||||||| |||||||| ||||||| Sbjct: 122746 aggactggatgaagcaggtgcgggaggtggcctacgacatcaaggactgcgtcgacga 122803
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 1 gatggagctggtggtgggagcttcggaggcgacgatgaagtccgtcatgggcaagctggg 60 ||||||| ||||||| || ||||||||||| || |||||| || || |||||||| |||| Sbjct: 83649 gatggagttggtggtaggcgcttcggaggccaccatgaaggccctcctgggcaagttggg 83708 Query: 61 cggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctccagtacat 120 ||||||||||||||||||| | || || |||| ||| ||||||| |||||||||| Sbjct: 83709 aaacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgacatccagtacat 83768 Query: 121 caacgacgagctggccagcatgcagtccttcctc 154 || ||||||| |||||||||| || |||||||| Sbjct: 83769 cagcgacgagatggccagcatccacgccttcctc 83802 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 209 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 |||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 83851 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 83910 Query: 269 tcggcccaccgcctcc 284 | |||||||| |||| Sbjct: 83911 ttcgcccaccgtctcc 83926
>dbj|AK064142.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B04, full insert sequence Length = 2789 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 209 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 |||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||| Sbjct: 329 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 388 Query: 269 tcggcccaccgcctcc 284 | |||||||| |||| Sbjct: 389 ttcgcccaccgtctcc 404
>dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020O22, full insert sequence Length = 3275 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 52 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 111 |||||||||| |||||| || |||||||||||||| || |||||| || |||| | Sbjct: 113 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 172 Query: 112 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 154 ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 173 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 215 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 268 ||||||||||||||||| | ||||| || |||||||||||||||||||| |||||||| Sbjct: 256 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 314
>dbj|AK119331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-B07, full insert sequence Length = 3124 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 211 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 269 |||||||||| ||||| | |||||| || |||||||||||||||||||||||||||||| Sbjct: 311 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | ||| Sbjct: 156 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 215 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 | ||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 216 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 263
>gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0047M04, complete sequence Length = 109523 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 201 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 260 |||||| |||||||||||||||||||||||| ||| || |||| ||| | |||||||||| Sbjct: 60225 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 60284 Query: 261 tcgacgact 269 |||| |||| Sbjct: 60285 tcgatgact 60293 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 60141 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 60192
>dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D06, full insert sequence Length = 2265 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 201 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 260 |||||| |||||||||||||||||||||||| ||| || |||| ||| | |||||||||| Sbjct: 214 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 273 Query: 261 tcgacgact 269 |||| |||| Sbjct: 274 tcgatgact 282 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 130 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 181
>dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065D18, full insert sequence Length = 3778 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 201 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 260 |||||| |||||||||||||||||||||||| ||| || |||| ||| | |||||||||| Sbjct: 583 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 642 Query: 261 tcgacgact 269 |||| |||| Sbjct: 643 tcgatgact 651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 111 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 162 ||||||||||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct: 499 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 550
>ref|NM_194733.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OSJNBb0004A06.5), mRNA Length = 1023 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||||||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 47 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 106 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 153 || |||||||||||| |||||||| ||||||||| || ||||||| Sbjct: 107 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 152 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 208 gaaggactggatgaagcagatccgcgacat 237 |||| ||||||||||||||||||||||||| Sbjct: 189 gaagcactggatgaagcagatccgcgacat 218
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||||||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 1934630 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 1934571 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 153 || |||||||||||| |||||||| ||||||||| || ||||||| Sbjct: 1934570 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 208 gaaggactggatgaagcagatccgcgacat 237 |||| ||||||||||||||||||||||||| Sbjct: 1934488 gaagcactggatgaagcagatccgcgacat 1934459
>gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0004A06, complete sequence Length = 153510 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||||||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 25359 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 25300 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 153 || |||||||||||| |||||||| ||||||||| || ||||||| Sbjct: 25299 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 25254 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 208 gaaggactggatgaagcagatccgcgacat 237 |||| ||||||||||||||||||||||||| Sbjct: 25217 gaagcactggatgaagcagatccgcgacat 25188
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||||||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 1934630 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 1934571 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 153 || |||||||||||| |||||||| ||||||||| || ||||||| Sbjct: 1934570 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 208 gaaggactggatgaagcagatccgcgacat 237 |||| ||||||||||||||||||||||||| Sbjct: 1934488 gaagcactggatgaagcagatccgcgacat 1934459 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 11143117 cctacgacatcgaggactacatcgacga 11143090 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||| ||| ||||||||||| ||||||||||||||| Sbjct: 18735675 tggatgaagcagctccacgagctcacctacgactcggaggactgcatcgac 18735625
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgactcggcccaccgcctccacggc 289 |||||||||||||||||||||||||| ||| | ||||||||||| |||| Sbjct: 3245029 cctacgacatcgaggactgcatcgacctctccgtccaccgcctccgcggc 3244980 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgactcggcccaccgcctcca 285 |||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 3237848 cctacgacatcgaggactgcatcgacctctccgtccaccgcctcca 3237803 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacg 266 ||||||||||||| || | || ||| |||||||| ||||||||||||||||| Sbjct: 2983069 ctggatgaagcaggtcagggagatcgcctacgacgccgaggactgcatcgacg 2983017 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 96 gcgtcaacggcgacctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 ||||| ||||||| | ||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 2983184 gcgtccacggcgaggtgcagtacatcaaggacgagctggagagcatgaacgccttcctcc 2983125 Query: 156 g 156 | Sbjct: 2983124 g 2983124
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgactcggcccaccgcctccacggc 289 |||||||||||||||||||||||||| ||| | ||||||||||| |||| Sbjct: 32392 cctacgacatcgaggactgcatcgacctctccgtccaccgcctccgcggc 32343 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgactcggcccaccgcctcca 285 |||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 25211 cctacgacatcgaggactgcatcgacctctccgtccaccgcctcca 25166
>dbj|AK102733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106B03, full insert sequence Length = 3114 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacgactcggcccaccgcctccacggc 289 |||||||||||||||||||||||||| ||| | ||||||||||| |||| Sbjct: 277 cctacgacatcgaggactgcatcgacctctccgtccaccgcctccgcggc 326
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 48 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 107 |||||||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 1934581 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 1934522 Query: 108 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 153 || |||||||||||| |||||||| ||||||||| || ||||||| Sbjct: 1934521 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934476 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 208 gaaggactggatgaagcagatccgcgacat 237 |||| ||||||||||||||||||||||||| Sbjct: 1934439 gaagcactggatgaagcagatccgcgacat 1934410 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 11149557 cctacgacatcgaggactacatcgacga 11149530 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||| ||| ||||||||||| ||||||||||||||| Sbjct: 18746528 tggatgaagcagctccacgagctcacctacgactcggaggactgcatcgac 18746478
>gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0313E01, complete sequence Length = 149215 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||||||||||||| | ||| ||||||||| Sbjct: 97999 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 97951
>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0051D10, complete sequence Length = 140272 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||||||||||||| | ||| ||||||||| Sbjct: 123013 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 123061 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||| ||||||||| | ||| ||||||||| Sbjct: 16367 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 16415
>dbj|AK119392.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-C12, full insert sequence Length = 3213 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||||||||||||| | ||| ||||||||| Sbjct: 349 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 397
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 98081 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 98030 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||| || | ||||| || |||||||||||||||||||||||||| Sbjct: 97293 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 97344 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 120826 cctacgacatcgaggactgcatcgac 120851 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 4329 cctacgacatcgaggactgcatcgac 4354
>ref|NM_183904.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2478 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 228 tccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||| || ||||||||||||||||||| |||||| Sbjct: 212 tccgcgacctcgcctacgacatcgaggactggatcgac 249
>gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062D09, complete sequence Length = 160244 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacgact 269 ||||||| |||||||||||||||||||||| Sbjct: 109060 cctacgatatcgaggactgcatcgacgact 109089
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 129529 cctacgacatcgaggactgcatcgac 129504
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 126931 cctacgacatcgaggactgcatcgac 126906
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcga 264 |||||||||||||||||||||||||| Sbjct: 7602033 acctacgacatcgaggactgcatcga 7602058 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 22919783 ctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgc 22919738 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ctacgacatcgaggactgcat 261 ||||||||||||||||||||| Sbjct: 16640065 ctacgacatcgaggactgcat 16640045
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||||||||||||| Sbjct: 23441395 cctacgacatcgaggactgcatcgac 23441370
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 228 tccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||| || ||||||||||||||||||| |||||| Sbjct: 13127453 tccgcgacctcgcctacgacatcgaggactggatcgac 13127416 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 35723062 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 35723112 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cctcgccgcgacgtcgccgc 372 |||||||||||||||||||| Sbjct: 18672048 cctcgccgcgacgtcgccgc 18672029
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 228 tccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||| || ||||||||||||||||||| |||||| Sbjct: 103174 tccgcgacctcgcctacgacatcgaggactggatcgac 103137
>dbj|AK070856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064J22, full insert sequence Length = 3237 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcga 264 |||||||||||||||||||||||||| Sbjct: 420 acctacgacatcgaggactgcatcga 445
>dbj|AK068195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146B15, full insert sequence Length = 2761 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 228 tccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||| || ||||||||||||||||||| |||||| Sbjct: 369 tccgcgacctcgcctacgacatcgaggactggatcgac 406
>dbj|AK066086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B16, full insert sequence Length = 2644 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacgact 269 ||||||| |||||||||||||||||||||| Sbjct: 1752 cctacgatatcgaggactgcatcgacgact 1723
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcga 264 |||||||||||||||||||||||||| Sbjct: 7601912 acctacgacatcgaggactgcatcga 7601937 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 22847974 ctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgc 22847929 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ctacgacatcgaggactgcat 261 ||||||||||||||||||||| Sbjct: 16593298 ctacgacatcgaggactgcat 16593278
>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113215 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcga 264 |||||||||||||||||||||||||| Sbjct: 90100 acctacgacatcgaggactgcatcga 90125
>ref|NM_185593.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2970 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacg 266 ||||||||||||| || | || ||| |||||||| ||||||||||||||||| Sbjct: 213 ctggatgaagcaggtcagggagatcgcctacgacgccgaggactgcatcgacg 265 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 96 gcgtcaacggcgacctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 ||||| ||||||| | ||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 98 gcgtccacggcgaggtgcagtacatcaaggacgagctggagagcatgaacgccttcctcc 157 Query: 156 g 156 | Sbjct: 158 g 158
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||| ||||||||| | ||| ||||||||| Sbjct: 56388 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 56340
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacg 266 ||||||||||||| || | || ||| |||||||| ||||||||||||||||| Sbjct: 143215 ctggatgaagcaggtcagggagatcgcctacgacgccgaggactgcatcgacg 143163 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 96 gcgtcaacggcgacctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 ||||| ||||||| | ||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 143330 gcgtccacggcgaggtgcagtacatcaaggacgagctggagagcatgaacgccttcctcc 143271 Query: 156 g 156 | Sbjct: 143270 g 143270
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacg 266 ||||||||||||| || | || ||| |||||||| ||||||||||||||||| Sbjct: 71018 ctggatgaagcaggtcagggagatcgcctacgacgccgaggactgcatcgacg 70966 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 96 gcgtcaacggcgacctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 155 ||||| ||||||| | ||||||||||| |||||||||| |||||| | ||||||||| Sbjct: 71133 gcgtccacggcgaggtgcagtacatcaaggacgagctggagagcatgaacgccttcctcc 71074 Query: 156 g 156 | Sbjct: 71073 g 71073
>dbj|AK119407.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F02, full insert sequence Length = 2795 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 262 ||||||||||||| |||||||| ||||||||| | ||| ||||||||| Sbjct: 332 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 380
>ref|NM_196108.1| Oryza sativa (japonica cultivar-group) putative disease resistance protein (OJ1003C07.3), mRNA Length = 2694 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 245 cctacgacatcgaggactacatcgacga 272
>gb|AY327045.1| Oryza sativa (japonica cultivar-group) disease-resistant protein DS3 mRNA, complete cds Length = 2913 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 336 cctacgacatcgaggactacatcgacga 363
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 15940 cctacgacatcgaggactacatcgacga 15967
>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1208D02 from chromosome 10, complete sequence Length = 120132 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 11237 cctacgacatcgaggactacatcgacga 11210
>dbj|AK100740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118D09, full insert sequence Length = 4244 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||||||||||||| ||||||||| Sbjct: 433 cctacgacatcgaggactacatcgacga 460
>ref|XM_480601.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2808 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 241 acctatgacatcgaggactgcatcgatgact 271
>ref|XM_480600.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3143 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 469 acctatgacatcgaggactgcatcgatgact 499
>ref|XM_477004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2865 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| | ||||| || |||||||| |||||||||||||||| Sbjct: 208 tggatgaagcaggtgcgcgagctcgcctacgacgccgaggactgcatcgac 258
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||| ||| ||||||||||| ||||||||||||||| Sbjct: 31095 tggatgaagcagctccacgagctcacctacgactcggaggactgcatcgac 31045
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 gacatcgaggactgcatcgacga 267 ||||||||||||||||||||||| Sbjct: 145130 gacatcgaggactgcatcgacga 145152
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 227 atccgcgacatcacctacgacatcgaggactgcatcgac 265 ||||||||||| ||||||||||||||||| ||||||| Sbjct: 68495 atccgcgacatgtcctacgacatcgaggacgccatcgac 68457
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 10205388 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 10205438
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||| ||| ||||||||||| ||||||||||||||| Sbjct: 96953 tggatgaagcagctccacgagctcacctacgactcggaggactgcatcgac 96903
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 66801 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 66851
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 357 gccgcgacgtcgccgccaagatctccg 383 ||||| ||||||||||||||||||||| Sbjct: 15072219 gccgctacgtcgccgccaagatctccg 15072245 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| | |||||| || |||||||| ||||||||||| Sbjct: 19866713 tgaagcaggtgcgcgacctcgcctacgacgtcgaggactgc 19866673
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 6131954 acctatgacatcgaggactgcatcgatgact 6131984 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 6121689 acctatgacatcgaggactgcatcgatgact 6121719 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| |||| ||| || |||||||| ||||||||||| Sbjct: 27009925 tgaagcaggtccgtgacgtcgcctacgacgtcgaggactgc 27009965 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| || ||||||| Sbjct: 17373068 cctacgacatcgaggacagcctcgacga 17373041
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| | ||||| || |||||||| |||||||||||||||| Sbjct: 5325831 tggatgaagcaggtgcgcgagctcgcctacgacgccgaggactgcatcgac 5325781 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 15877907 cctacgacatcgaggattgcatcgac 15877882
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 10203489 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 10203539
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 126399 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 126449
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| ||||||| || |||||||| ||||||||||||||| Sbjct: 92766 tggatgaagcagctccgcgagctcgcctacgactcggaggactgcatcgac 92716
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 357 gccgcgacgtcgccgccaagatctccg 383 ||||| ||||||||||||||||||||| Sbjct: 63862 gccgctacgtcgccgccaagatctccg 63888
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| | ||||| || |||||||| |||||||||||||||| Sbjct: 60195 tggatgaagcaggtgcgcgagctcgcctacgacgccgaggactgcatcgac 60145
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 215 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 265 |||||||||||| | ||||| || |||||||| |||||||||||||||| Sbjct: 124594 tggatgaagcaggtgcgcgagctcgcctacgacgccgaggactgcatcgac 124544
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 357 gccgcgacgtcgccgccaagatctccg 383 ||||| ||||||||||||||||||||| Sbjct: 141665 gccgctacgtcgccgccaagatctccg 141691
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 87971 acctatgacatcgaggactgcatcgatgact 88001 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 77706 acctatgacatcgaggactgcatcgatgact 77736
>dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F09, full insert sequence Length = 3143 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 239 acctacgacatcgaggactgcatcgacgact 269 ||||| |||||||||||||||||||| |||| Sbjct: 469 acctatgacatcgaggactgcatcgatgact 499
>dbj|AK068795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169J03, full insert sequence Length = 2516 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 357 gccgcgacgtcgccgccaagatctccg 383 ||||| ||||||||||||||||||||| Sbjct: 457 gccgctacgtcgccgccaagatctccg 483
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcat 261 |||||||||||||||||||||| Sbjct: 102844 cctacgacatcgaggactgcat 102823
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||| ||||||||||||||| Sbjct: 68937 cctacgacatggaggactgcatcgac 68912
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 2873 cctacgacatcgaggattgcatcgac 2898
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 ||||| |||||||||||||||||||| Sbjct: 67294 cctaccacatcgaggactgcatcgac 67269 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 catcgaggactgcatcgacg 266 |||||||||||||||||||| Sbjct: 76549 catcgaggactgcatcgacg 76568
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 9927056 cctacgacatcgaggattgcatcgac 9927031
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 108018 cctacgacatcgaggattgcatcgac 107993
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 117421 cctacgacatcgaggattgcatcgac 117396
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 1749 cctacgacatcgaggattgcatcgac 1724
>dbj|AK111306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-B09, full insert sequence Length = 864 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 ||||| |||||||||||||||||||| Sbjct: 201 cctaccacatcgaggactgcatcgac 226
>dbj|AK101376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036C01, full insert sequence Length = 2352 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 |||||||||||||||| ||||||||| Sbjct: 383 cctacgacatcgaggattgcatcgac 408
>dbj|AK072355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055L12, full insert sequence Length = 4237 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgac 265 ||||| |||||||||||||||||||| Sbjct: 234 cctaccacatcgaggactgcatcgac 259
>gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island putative transposase, hypothetical protein, putative transposase (IS1629), and negrogenic protein (nec1) genes, putative transposase pseudogene, and putative resolvase/invertase gene, complete cds Length = 11000 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 cggcgccggccgagcccagacc 193 |||||||||||||||||||||| Sbjct: 7643 cggcgccggccgagcccagacc 7622
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 29060 ctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgc 29015
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 214 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 37061 ctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgc 37106
>ref|XM_483568.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4458 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| |||| ||| || |||||||| ||||||||||| Sbjct: 206 tgaagcaggtccgtgacgtcgcctacgacgtcgaggactgc 246
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 ggggagcggcgggagaggtacggggtcaa 438 |||||||||||| |||||||||| ||||| Sbjct: 28037 ggggagcggcggcagaggtacggcgtcaa 28065
>ref|XM_546880.2| PREDICTED: Canis familiaris similar to FH1/FH2 domains-containing protein (Formin homolog overexpressed in spleen) (FHOS) (Formin homology 2 domain containing 1) (LOC489760), mRNA Length = 3531 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 cccaccgcctccacggcctgcgctc 297 |||||||||||||| |||||||||| Sbjct: 1752 cccaccgcctccactgcctgcgctc 1776
>ref|XM_845335.1| PREDICTED: Canis familiaris similar to unc-5 homolog B, transcript variant 1 (LOC479239), mRNA Length = 3277 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccgtcggcgccggccgagccc 188 ||||||||||||||||||||| Sbjct: 459 ccgtcggcgccggccgagccc 479
>ref|XM_856306.1| PREDICTED: Canis familiaris similar to unc-5 homolog B, transcript variant 5 (LOC479239), mRNA Length = 3244 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccgtcggcgccggccgagccc 188 ||||||||||||||||||||| Sbjct: 459 ccgtcggcgccggccgagccc 479
>ref|XM_856278.1| PREDICTED: Canis familiaris similar to unc-5 homolog B, transcript variant 4 (LOC479239), mRNA Length = 3301 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccgtcggcgccggccgagccc 188 ||||||||||||||||||||| Sbjct: 459 ccgtcggcgccggccgagccc 479
>ref|XM_856250.1| PREDICTED: Canis familiaris similar to unc-5 homolog B, transcript variant 3 (LOC479239), mRNA Length = 3301 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccgtcggcgccggccgagccc 188 ||||||||||||||||||||| Sbjct: 459 ccgtcggcgccggccgagccc 479
>ref|XM_856222.1| PREDICTED: Canis familiaris similar to unc-5 homolog B, transcript variant 2 (LOC479239), mRNA Length = 3352 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccgtcggcgccggccgagccc 188 ||||||||||||||||||||| Sbjct: 459 ccgtcggcgccggccgagccc 479
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| |||| ||| || |||||||| ||||||||||| Sbjct: 111325 tgaagcaggtccgtgacgtcgcctacgacgtcgaggactgc 111365
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| | |||||| || |||||||| ||||||||||| Sbjct: 91153 tgaagcaggtgcgcgacctcgcctacgacgtcgaggactgc 91113
>dbj|AK119460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E09, full insert sequence Length = 3382 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| | |||||| || |||||||| ||||||||||| Sbjct: 230 tgaagcaggtgcgcgacctcgcctacgacgtcgaggactgc 270
>dbj|AK101496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043F22, full insert sequence Length = 4339 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ctacgacatcgaggactgcat 261 ||||||||||||||||||||| Sbjct: 1197 ctacgacatcgaggactgcat 1217
>dbj|AK100778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120F15, full insert sequence Length = 4121 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 tgaagcagatccgcgacatcacctacgacatcgaggactgc 259 |||||||| | |||||| || |||||||| ||||||||||| Sbjct: 226 tgaagcaggtgcgcgacctcgcctacgacgtcgaggactgc 266
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 ggacctcaccgccgtcggcgccggc 181 ||||||||||||||||||| ||||| Sbjct: 77557 ggacctcaccgccgtcggcaccggc 77581
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ctacgacatcgaggactgcat 261 ||||||||||||||||||||| Sbjct: 30701 ctacgacatcgaggactgcat 30721
>ref|XM_482041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| || ||||||| Sbjct: 899 cctacgacatcgaggacagcctcgacga 926
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 tacgacatcgaggactgcatcgacgact 269 |||||||| ||||| ||||||||||||| Sbjct: 5904 tacgacattgaggattgcatcgacgact 5877
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 tacgacatcgaggactgcatcgacgact 269 |||||||| ||||| ||||||||||||| Sbjct: 72920 tacgacattgaggattgcatcgacgact 72947
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||| ||||||| ||||||||||| Sbjct: 39025 cctacgacgtcgaggattgcatcgacga 39052
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 cctacgacatcgaggactgcatcgacga 267 |||||||| ||||||| ||||||||||| Sbjct: 88941 cctacgacgtcgaggattgcatcgacga 88968
>ref|XM_656778.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4266.2), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgacatcacctacgacatcg 251 |||||||||||||||||||| Sbjct: 2868 cgacatcacctacgacatcg 2887
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 ggtgggggtggaggaccaca 575 |||||||||||||||||||| Sbjct: 54310 ggtgggggtggaggaccaca 54329
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 catgggcaagctgggcggcc 65 |||||||||||||||||||| Sbjct: 1122826 catgggcaagctgggcggcc 1122845
>ref|XM_970708.1| PREDICTED: Tribolium castaneum hypothetical protein LOC655733, transcript variant 2 (LOC655733), mRNA Length = 878 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tcatgggcaagctgggcggc 64 |||||||||||||||||||| Sbjct: 372 tcatgggcaagctgggcggc 353
>ref|XM_970649.1| PREDICTED: Tribolium castaneum hypothetical protein LOC655733, transcript variant 1 (LOC655733), mRNA Length = 765 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tcatgggcaagctgggcggc 64 |||||||||||||||||||| Sbjct: 260 tcatgggcaagctgggcggc 241
>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11 Length = 344249 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 agatgcgggcgcagcagatc 409 |||||||||||||||||||| Sbjct: 286065 agatgcgggcgcagcagatc 286046
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 catgggcaagctgggcggcc 65 |||||||||||||||||||| Sbjct: 323980 catgggcaagctgggcggcc 323999
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 catgggcaagctgggcggcc 65 |||||||||||||||||||| Sbjct: 260924 catgggcaagctgggcggcc 260905
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 catgggcaagctgggcggcc 65 |||||||||||||||||||| Sbjct: 286654 catgggcaagctgggcggcc 286635
>emb|AL590582.1|SPAPB24D3 S.pombe chromosome I BAC pB24D3 Length = 29314 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 gccatgaaggatccggtggg 561 |||||||||||||||||||| Sbjct: 17479 gccatgaaggatccggtggg 17460
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cctcgccgcgacgtcgccgc 372 |||||||||||||||||||| Sbjct: 59494 cctcgccgcgacgtcgccgc 59475
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gatgcgggcgcagcagatcg 410 |||||||||||||||||||| Sbjct: 4361931 gatgcgggcgcagcagatcg 4361912
>ref|NM_001019421.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAPB24D3.09c), partial mRNA Length = 4191 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 gccatgaaggatccggtggg 561 |||||||||||||||||||| Sbjct: 326 gccatgaaggatccggtggg 345
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cctcgccgcgacgtcgccgc 372 |||||||||||||||||||| Sbjct: 95321 cctcgccgcgacgtcgccgc 95302
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 cctacgacatcgaggactgcatcgacga 267 ||||||||||||||||| || ||||||| Sbjct: 56692 cctacgacatcgaggacagcctcgacga 56665
>emb|AJ507095.1|HVU507095 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-9203 gene) Length = 3428 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 acatcgaggactgcatcgac 265 |||||||||||||||||||| Sbjct: 294 acatcgaggactgcatcgac 313
>dbj|AK101707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060J18, full insert sequence Length = 2947 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 tacgacatcgaggactgcatcgacgact 269 |||||||| ||||| ||||||||||||| Sbjct: 269 tacgacattgaggattgcatcgacgact 296
>dbj|AK066950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P15, full insert sequence Length = 3712 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 catcgaggactgcatcgacg 266 |||||||||||||||||||| Sbjct: 529 catcgaggactgcatcgacg 548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,821,659 Number of Sequences: 3902068 Number of extensions: 3821659 Number of successful extensions: 87116 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84535 Number of HSP's gapped (non-prelim): 2560 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
