ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20n19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, comple... 283 3e-73
2gb|AY105327.1| Zea mays PCO147247 mRNA sequence 236 6e-59
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 198 1e-47
5emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa... 198 1e-47
6dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 5e-44
7dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
8gb|AY570979.1| Xerophyta humilis clone HC437 unknown mRNA 64 5e-07
9ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 ... 58 3e-05
10gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) ... 58 3e-05
11gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) ... 58 3e-05
12emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
13emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
14emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
15emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
16emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
17dbj|AK111215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
18dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 4e-04
19emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o... 52 0.002
20gb|AY489190.1| Capsicum annuum putative At4g26850-like protein ... 48 0.027
21gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence 46 0.11
22gb|AC150683.3| Mus musculus BAC clone RP23-435E16 from chromosom... 42 1.7
23emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.7
24gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosom... 42 1.7
25ref|NM_118819.2| Arabidopsis thaliana VTC2 (VITAMIN C DEFECTIVE ... 40 6.6
26ref|XM_845849.1| PREDICTED: Canis familiaris similar to BTB (POZ... 40 6.6
27gb|U41107.1| Caenorhabditis elegans cosmid F55C12, complete sequ... 40 6.6
28gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete ... 40 6.6
29emb|AL355315.18| Human DNA sequence from clone RP11-548K23 on ch... 40 6.6
30gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, com... 40 6.6
31gb|AY056134.1| Arabidopsis thaliana unknown protein (At4g26850) ... 40 6.6
32emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 6.6
33emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, ... 40 6.6
34emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 40 6.6
35emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, B... 40 6.6
36emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 i... 40 6.6
37emb|AL662836.7| Mouse DNA sequence from clone RP23-313L19 on chr... 40 6.6
38gb|AF508793.1| Arabidopsis thaliana VTC2 (VTC2) gene, complete cds 40 6.6
39gb|AY093138.1| Arabidopsis thaliana putative protein (At4g26850)... 40 6.6
40ref|XM_936572.1| PREDICTED: Homo sapiens suppressor of cytokine ... 40 6.6
41gb|AF085249.1|AF085249 Gallus gallus calcium/calmodulin-dependen... 40 6.6
42gb|BT006589.1| Arabidopsis thaliana At4g26850 mRNA, complete cds 40 6.6
43gb|AC124789.12| Homo sapiens chromosome 17, clone RP11-923C2, co... 40 6.6
44ref|NM_204294.1| Gallus gallus calcium/calmodulin-dependent prot... 40 6.6
45ref|XM_573834.1| PREDICTED: Rattus norvegicus similar to OTTHUMP... 40 6.6
46emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in... 40 6.6
47ref|NM_014598.1| Homo sapiens suppressor of cytokine signaling 7... 40 6.6
48emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chr... 40 6.6 
>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence
          Length = 1732

 Score =  283 bits (143), Expect = 3e-73
 Identities = 347/415 (83%)
 Strand = Plus / Plus

                                                                       
Query: 76  agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 135
           |||||||||||||| | ||||||||| ||||| | || || || || ||||| |||||||
Sbjct: 374 agtgggaggacaggatggcccgaggcttattccgctacgatgtcactgcctgtgagacca 433

                                                                       
Query: 136 aggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaaga 195
           |||| || |||||| | ||||||||||||||||| || || ||||| |||||||| ||||
Sbjct: 434 aggtcatccctggcaaccttgggtttgttgcacaactcaatgaagggcgccaccttaaga 493

                                                                       
Query: 196 agcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaagttca 255
           ||||||| || ||||| ||||| |||||||||||||||||||| ||  ||||||||||||
Sbjct: 494 agcgccctactgagtttcgtgtggaccgtgtgctccagccatttgaccctgccaagttca 553

                                                                       
Query: 256 acttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtggcgaca 315
           | |||||||| ||||||||||| |||||||| || |  ||||||||||||| ||| ||  
Sbjct: 554 atttcaccaaagttggccaggaagaggttcttttccaatttgagaatggtgatggtgatg 613

                                                                       
Query: 316 gcagctatttccttgaaaatgccccaagcattgagggtgaccgtgctcccagcgttgttg 375
            ||||||||||||  |  | || |||| |||||  | ||| |||||||| |  |||||||
Sbjct: 614 acagctatttcctgaatgacgctccaatcattgctgttgatcgtgctccaaatgttgttg 673

                                                                       
Query: 376 caatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtccttgacc 435
           | |||||||||||||| ||||| || || ||||||||||||||||| ||||| || ||||
Sbjct: 674 ctatcaatgtgagcccaattgaatatggacatgtgcttctcattcctcgtgttctggacc 733

                                                                  
Query: 436 gcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggcagc 490
           ||||||||||| | |||||||| || || ||| |||||||||| || ||||||||
Sbjct: 734 gcctgcctcagaagattgatccagagagtttcttgcttgcactgcaaatggcagc 788
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>gb|AY105327.1| Zea mays PCO147247 mRNA sequence
          Length = 1954

 Score =  236 bits (119), Expect = 6e-59
 Identities = 341/415 (82%)
 Strand = Plus / Plus

                                                                        
Query: 76   agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 135
            |||||||||||||| |  | |||||| ||||| | || || || || ||||| |||||||
Sbjct: 632  agtgggaggacaggatgactcgaggcttattccgctacgatgtcactgcctgtgagacca 691

                                                                        
Query: 136  aggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaaga 195
            |||| ||||||||| | ||||||||||||||||| || || ||||| ||||| || ||||
Sbjct: 692  aggtcattcctggcaaccttgggtttgttgcacaactcaatgaagggcgccatcttaaga 751

                                                                        
Query: 196  agcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaagttca 255
            ||||||| || ||||| ||||| ||||||||||||||||| || ||  ||||||| ||||
Sbjct: 752  agcgccctactgagtttcgtgtggaccgtgtgctccagccgtttgaccctgccaaattca 811

                                                                        
Query: 256  acttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtggcgaca 315
            | ||||| || ||||||||||| ||||||||||| |  ||||||||| ||||||| ||  
Sbjct: 812  atttcacaaaagttggccaggaagaggttctcttccaatttgagaatagtggtggtgatg 871

                                                                        
Query: 316  gcagctatttccttgaaaatgccccaagcattgagggtgaccgtgctcccagcgttgttg 375
             ||||||||||||  | || || |||| |||||  | ||| || ||||| |  ||| |||
Sbjct: 872  acagctatttcctgaacaacgctccaatcattgctgttgatcgggctccaaatgttattg 931

                                                                        
Query: 376  caatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtccttgacc 435
            | |||||||| ||||| ||||| || || ||||||||||||||||| ||||| || ||||
Sbjct: 932  ctatcaatgtaagcccaattgaatatggacatgtgcttctcattcctcgtgttctggacc 991

                                                                   
Query: 436  gcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggcagc 490
            |||||||||||   |||||||| || |||||| |||||||||| || ||||||||
Sbjct: 992  gcctgcctcagaggattgatccagagagcttcttgcttgcactgcaaatggcagc 1046
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                           
Query: 75      cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 134
               |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 4534249 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534190

                                                                           
Query: 135     aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 194
               ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 4534189 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 4534130

                                                                           
Query: 195     aagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaagttc 254
               |||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||||||
Sbjct: 4534129 aagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaagttc 4534070

                                                                       
Query: 255     aacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 310
               ||||||||||| ||||||||||||||||| ||||| |  |||||||||||||||||
Sbjct: 4534069 aacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 4534014



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                           
Query: 387     agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 446
               ||||| ||||| || || ||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 4533852 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 4533793

                                                        
Query: 447     caaattgatcctgaaagcttcctgcttgcactacacatggc 487
                  ||||| |  || |||||| |||||||||| ||||||||
Sbjct: 4533792 aggattgaccaggagagcttcttgcttgcactgcacatggc 4533752
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                           
Query: 75      cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 134
               |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 4534230 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534171

                                                                           
Query: 135     aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 194
               ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 4534170 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 4534111

                                                                           
Query: 195     aagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaagttc 254
               |||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||||||
Sbjct: 4534110 aagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaagttc 4534051

                                                                       
Query: 255     aacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 310
               ||||||||||| ||||||||||||||||| ||||| |  |||||||||||||||||
Sbjct: 4534050 aacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 4533995



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                           
Query: 387     agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 446
               ||||| ||||| || || ||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 4533833 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 4533774

                                                        
Query: 447     caaattgatcctgaaagcttcctgcttgcactacacatggc 487
                  ||||| |  || |||||| |||||||||| ||||||||
Sbjct: 4533773 aggattgaccaggagagcttcttgcttgcactgcacatggc 4533733
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>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129155

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Plus

                                                                         
Query: 75    cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 134
             |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 70529 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 70588

                                                                         
Query: 135   aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 194
             ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 70589 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 70648

                                                                         
Query: 195   aagcgcccaaccgagttccgtgttgaccgtgtgctccagccattcgattctgccaagttc 254
             |||||||| || || ||||| || ||||||||||| || ||||| ||| |||||||||||
Sbjct: 70649 aagcgccctactgaattccgcgtggaccgtgtgcttcaaccatttgatgctgccaagttc 70708

                                                                     
Query: 255   aacttcaccaaggttggccaggaggaggttctctttcgctttgagaatggtggtgg 310
             ||||||||||| ||||||||||||||||| ||||| |  |||||||||||||||||
Sbjct: 70709 aacttcaccaaagttggccaggaggaggtgctcttccaatttgagaatggtggtgg 70764



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                         
Query: 387   agccctattgagtacggtcatgtgcttctcattccacgtgtccttgaccgcctgcctcag 446
             ||||| ||||| || || ||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 70926 agcccaattgaatatggccatgttcttctcattccccgtgtactggaccgcctgcctcag 70985

                                                      
Query: 447   caaattgatcctgaaagcttcctgcttgcactacacatggc 487
                ||||| |  || |||||| |||||||||| ||||||||
Sbjct: 70986 aggattgaccaggagagcttcttgcttgcactgcacatggc 71026
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>dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M14, full
           insert sequence
          Length = 2088

 Score =  186 bits (94), Expect = 5e-44
 Identities = 175/202 (86%)
 Strand = Plus / Plus

                                                                       
Query: 109 gatatgacgtaacagcctgcgagaccaaggtgattcctggcgagcttgggtttgttgcac 168
           ||||||| || || ||||| ||||||||||| || || ||| | ||||||||||||||||
Sbjct: 704 gatatgatgtcactgcctgtgagaccaaggttatcccaggcaaccttgggtttgttgcac 763

                                                                       
Query: 169 agcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgaccgtgtgc 228
           | || || ||||| |||||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 764 aactgaatgaaggacgccacctcaagaagcgccctactgaattccgcgtggaccgtgtgc 823

                                                                       
Query: 229 tccagccattcgattctgccaagttcaacttcaccaaggttggccaggaggaggttctct 288
           | || ||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 824 ttcaaccatttgatgctgccaagttcaacttcaccaaagttggccaggaggaggtgctct 883

                                 
Query: 289 ttcgctttgagaatggtggtgg 310
           | |  |||||||||||||||||
Sbjct: 884 tccaatttgagaatggtggtgg 905



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                        
Query: 369  gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtc 428
            ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||| ||||| 
Sbjct: 964  gttgttgcaatcaatgtaagcccaattgaatatggccatgttcttctcattccccgtgta 1023

                                                                       
Query: 429  cttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggc 487
            || |||||||||||||||   ||||| |  || |||||| |||||||||| ||||||||
Sbjct: 1024 ctggaccgcctgcctcagaggattgaccaggagagcttcttgcttgcactgcacatggc 1082
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>dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G08, full
           insert sequence
          Length = 1295

 Score =  147 bits (74), Expect = 4e-32
 Identities = 119/134 (88%)
 Strand = Plus / Plus

                                                                       
Query: 177 gaaggccgccacctcaagaagcgcccaaccgagttccgtgttgaccgtgtgctccagcca 236
           ||||| |||||||||||||||||||| || || ||||| || ||||||||||| || |||
Sbjct: 14  gaaggacgccacctcaagaagcgccctactgaattccgcgtggaccgtgtgcttcaacca 73

                                                                       
Query: 237 ttcgattctgccaagttcaacttcaccaaggttggccaggaggaggttctctttcgcttt 296
           || ||| |||||||||||||||||||||| ||||||||||||||||| ||||| |  |||
Sbjct: 74  tttgatgctgccaagttcaacttcaccaaagttggccaggaggaggtgctcttccaattt 133

                         
Query: 297 gagaatggtggtgg 310
           ||||||||||||||
Sbjct: 134 gagaatggtggtgg 147



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                       
Query: 369 gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgtc 428
           ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||| ||||| 
Sbjct: 206 gttgttgcaatcaatgtaagcccaattgaatatggccatgttcttctcattccccgtgta 265

                                                                      
Query: 429 cttgaccgcctgcctcagcaaattgatcctgaaagcttcctgcttgcactacacatggc 487
           || |||||||||||||||   ||||| |  || |||||| |||||||||| ||||||||
Sbjct: 266 ctggaccgcctgcctcagaggattgaccaggagagcttcttgcttgcactgcacatggc 324
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>gb|AY570979.1| Xerophyta humilis clone HC437 unknown mRNA
          Length = 1266

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 248 caagttcaacttcaccaaggttggccaggaggaggttctctttcgctt 295
           ||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct: 121 caagttcaatttcaccaaggtcgggcaggaggaggttctcttccgctt 168



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 369 gttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattccacgtgt 427
           |||||||||||||| |||||||| || ||||| || ||||| || || ||||| |||||
Sbjct: 239 gttgttgcaatcaacgtgagcccaatcgagtatggccatgtcctgcttattccccgtgt 297
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>ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 mRNA, complete cds
          Length = 1874

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 923 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 982

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 983 ctcgtgttcttga 995



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 163 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 221
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||||||||||
Sbjct: 719 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 777
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>gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1327

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 503 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 562

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 563 ctcgtgttcttga 575



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 163 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 221
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||||||||||
Sbjct: 299 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 357
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>gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1788

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 819 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 878

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 879 ctcgtgttcttga 891



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 163 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 221
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||||||||||
Sbjct: 615 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 673
to top
>emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS80ZC01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1806

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 857 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 916

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 917 ctcgtgttcttga 929



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 189 ctcaagaagcgcccaaccgagttccgtgttgac 221
           ||||||||| | |||||||||||||||||||||
Sbjct: 680 ctcaagaagagaccaaccgagttccgtgttgac 712
to top
>emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB4ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1694

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 808 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 867

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 868 ctcgtgttcttga 880



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 189 ctcaagaagcgcccaaccgagttccgtgttgac 221
           ||||||||| | |||||||||||||||||||||
Sbjct: 630 ctcaagaagagaccaaccgagttccgtgttgac 662
to top
>emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZF07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1838

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 923 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 982

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 983 ctcgtgttcttga 995



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 189 ctcaagaagcgcccaaccgagttccgtgttgac 221
           ||||||||| | |||||||||||||||||||||
Sbjct: 745 ctcaagaagagaccaaccgagttccgtgttgac 777
to top
>emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZF08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1692

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 783 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 842

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 843 ctcgtgttcttga 855



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 189 ctcaagaagcgcccaaccgagttccgtgttgac 221
           ||||||||| | |||||||||||||||||||||
Sbjct: 605 ctcaagaagagaccaaccgagttccgtgttgac 637
to top
>emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB9ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1684

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctcccagcgttgttgcaatcaatgtgagccctattgagtacggtcatgtgcttctcattc 420
           |||| ||||| ||||||||||||||||| || |||||||| || |||||| | || ||||
Sbjct: 771 ctcctagcgtcgttgcaatcaatgtgagtccgattgagtatgggcatgtgttgctgattc 830

                        
Query: 421 cacgtgtccttga 433
           | ||||| |||||
Sbjct: 831 ctcgtgttcttga 843



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 191 caagaagcgcccaaccgagttccgtgttgac 221
           ||||||| | |||||||||||||||||||||
Sbjct: 595 caagaagagaccaaccgagttccgtgttgac 625
to top
>dbj|AK111215.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B04, full
           insert sequence
          Length = 2890

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                       
Query: 159 tttgttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgtt 218
           ||||| |||||||| ||||| |||||| ||  |||||||||||| || ||||||||||| 
Sbjct: 180 tttgtggcacagctgaacgagggccgctacagcaagaagcgccccacagagttccgtgtg 239

                                                            
Query: 219 gaccgtgtgctccagccattcgattctgccaagttcaacttcaccaagg 267
           ||||  ||| | ||| | |||||  |   ||||||||||||||||||||
Sbjct: 240 gaccaggtggtgcaggccttcgaccccaacaagttcaacttcaccaagg 288
to top
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15
          Length = 82918

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 163   ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgttgac 221
             |||| ||||| || ||||| || || ||||||||| | |||||||||||||||||||||
Sbjct: 29107 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 29165
to top
>emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o19, COMPLETE SEQUENCE
          Length = 132030

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 163    ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttc 212
              |||| ||||||||||| ||||| |||||||||||| | ||||| ||||||
Sbjct: 101810 ttgctcagcttaacgagggccgacacctcaagaagagaccaactgagttc 101859



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 450    attgatcctgaaagcttcctgcttgcactacacatggcagc 490
              ||||||| ||| |||||| |||||||||| |||||||||||
Sbjct: 102197 attgatcatgagagcttcttgcttgcacttcacatggcagc 102237
to top
>gb|AY489190.1| Capsicum annuum putative At4g26850-like protein  mRNA, complete
           sequence
          Length = 589

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 248 caagttcaacttcaccaaggttggccaggaggaggttctctttc 291
           ||||||||||||||| |||||||| ||||| ||| | |||||||
Sbjct: 524 caagttcaacttcactaaggttggacaggaagagttgctctttc 567



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 123 gcctgcgagaccaaggtgattcctgg 148
           |||||||| |||||||||||||||||
Sbjct: 399 gcctgcgaaaccaaggtgattcctgg 424
to top
>gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence
          Length = 2013

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 370 ttgttgcaatcaatgtgagccctattgagta 400
           ||||||| |||||||||||||| ||||||||
Sbjct: 947 ttgttgctatcaatgtgagcccaattgagta 977



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 183 cgccacctcaagaagcgcccaaccgagtt 211
           |||||||| |||||||||||||| |||||
Sbjct: 763 cgccacctaaagaagcgcccaacagagtt 791
to top
>gb|AC150683.3| Mus musculus BAC clone RP23-435E16 from chromosome 7, complete sequence
          Length = 198646

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 269    tggccaggaggaggttctctt 289
              |||||||||||||||||||||
Sbjct: 158745 tggccaggaggaggttctctt 158765
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 351     ggtgaccgtgctcccagcgtt 371
               |||||||||||||||||||||
Sbjct: 2549882 ggtgaccgtgctcccagcgtt 2549862
to top
>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence
          Length = 198860

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 269    tggccaggaggaggttctctt 289
              |||||||||||||||||||||
Sbjct: 186600 tggccaggaggaggttctctt 186580
to top
>ref|NM_118819.2| Arabidopsis thaliana VTC2 (VITAMIN C DEFECTIVE 2) AT4G26850 (VTC2)
           mRNA, complete cds
          Length = 2084

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 162 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
           ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 819 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 874
to top
>ref|XM_845849.1| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing 11
            isoform 3, transcript variant 2 (LOC481292), mRNA
          Length = 3430

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgttgaccgtgtgctccagc 234
            ||||||||||||||||||||
Sbjct: 1075 tgttgaccgtgtgctccagc 1056
to top
>gb|U41107.1| Caenorhabditis elegans cosmid F55C12, complete sequence
          Length = 39086

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   catgtgcttctcattccacg 424
             ||||||||||||||||||||
Sbjct: 20793 catgtgcttctcattccacg 20812
to top
>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    actgagttcttcctcaattctctc 65
             |||||||| |||||||||||||||
Sbjct: 79670 actgagtttttcctcaattctctc 79693
to top
>emb|AL355315.18| Human DNA sequence from clone RP11-548K23 on chromosome 10 Contains the
              ANKRD2 gene for ankyrin repeat domain 2 (stretch responsive
              muscle), six novel genes, the gene for phosphatidylinositol
              4-kinase type II (PI4KII) and four CpG islands, complete
              sequence
          Length = 157193

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    caccaaggttggccaggagg 279
              ||||||||||||||||||||
Sbjct: 132404 caccaaggttggccaggagg 132423
to top
>gb|AC115090.8| Homo sapiens chromosome 17, clone CTC-861O14, complete sequence
          Length = 173716

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    gagtacggtcatgtgcttct 415
              ||||||||||||||||||||
Sbjct: 155346 gagtacggtcatgtgcttct 155365
to top
>gb|AY056134.1| Arabidopsis thaliana unknown protein (At4g26850) mRNA, complete cds
          Length = 2097

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 162 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
           ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 817 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 872
to top
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11
          Length = 302050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    tcagcaaattgatcctgaaa 462
              ||||||||||||||||||||
Sbjct: 197316 tcagcaaattgatcctgaaa 197297
to top
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66
          Length = 198372

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 162  gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
            ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 4402 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 4347
to top
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                      
Query: 162    gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
              ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 197722 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 197667
to top
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project)
          Length = 128574

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 162   gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
             ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 48559 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 48504
to top
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11,
             complete sequence
          Length = 133334

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   agcagctatttccttgaaaa 334
             ||||||||||||||||||||
Sbjct: 42382 agcagctatttccttgaaaa 42401
to top
>emb|AL662836.7| Mouse DNA sequence from clone RP23-313L19 on chromosome 11, complete
             sequence
          Length = 120749

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   ccaggaggaggttctctttc 291
             ||||||||||||||||||||
Sbjct: 60215 ccaggaggaggttctctttc 60196
to top
>gb|AF508793.1| Arabidopsis thaliana VTC2 (VTC2) gene, complete cds
          Length = 1884

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 162 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
           ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 599 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 654
to top
>gb|AY093138.1| Arabidopsis thaliana putative protein (At4g26850) mRNA, complete
           cds
          Length = 2045

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 162 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
           ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 817 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 872
to top
>ref|XM_936572.1| PREDICTED: Homo sapiens suppressor of cytokine signaling 7 (SOCS7),
            mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  gagtacggtcatgtgcttct 415
            ||||||||||||||||||||
Sbjct: 1589 gagtacggtcatgtgcttct 1570
to top
>gb|AF085249.1|AF085249 Gallus gallus calcium/calmodulin-dependent kinase type II beta
           subunit mRNA, complete cds
          Length = 1703

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tggccaggaggaggttctct 288
           ||||||||||||||||||||
Sbjct: 470 tggccaggaggaggttctct 451
to top
>gb|BT006589.1| Arabidopsis thaliana At4g26850 mRNA, complete cds
          Length = 1329

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 162 gttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgtgt 217
           ||||| ||||||||||| || || ||| | |||||| | ||||| |||||||||||
Sbjct: 316 gttgctcagcttaacgagggtcgtcacttgaagaagaggccaactgagttccgtgt 371
to top
>gb|AC124789.12| Homo sapiens chromosome 17, clone RP11-923C2, complete sequence
          Length = 105701

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  gagtacggtcatgtgcttct 415
            ||||||||||||||||||||
Sbjct: 9527 gagtacggtcatgtgcttct 9546
to top
>ref|NM_204294.1| Gallus gallus calcium/calmodulin-dependent protein kinase (CaM
           kinase) II beta (CAMK2B), mRNA
          Length = 1703

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tggccaggaggaggttctct 288
           ||||||||||||||||||||
Sbjct: 470 tggccaggaggaggttctct 451
to top
>ref|XM_573834.1| PREDICTED: Rattus norvegicus similar to OTTHUMP00000018508
           (LOC498559), mRNA
          Length = 1111

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 acagcagctatttccttgaa 332
           ||||||||||||||||||||
Sbjct: 362 acagcagctatttccttgaa 343
to top
>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7,
             complete sequence
          Length = 147943

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gagctccctactgagttctt 52
             ||||||||||||||||||||
Sbjct: 60496 gagctccctactgagttctt 60515
to top
>ref|NM_014598.1| Homo sapiens suppressor of cytokine signaling 7 (SOCS7), mRNA
          Length = 2162

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  gagtacggtcatgtgcttct 415
            ||||||||||||||||||||
Sbjct: 2054 gagtacggtcatgtgcttct 2035
to top
>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete
             sequence
          Length = 132015

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   ccaggaggaggttctctttc 291
             ||||||||||||||||||||
Sbjct: 39010 ccaggaggaggttctctttc 38991


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,655,892
Number of Sequences: 3902068
Number of extensions: 4655892
Number of successful extensions: 82958
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82789
Number of HSP's gapped (non-prelim): 169
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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