| Clone Name | baal21c16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK069946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035A19, full insert sequence Length = 2508 Score = 125 bits (63), Expect = 1e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 167 gaagttagaggtggaacagatattacactggatgctttagatgcttacctgaaatacctc 226 ||||||||||||||||| || || || |||||||||||| ||| |||||||||||||| Sbjct: 964 gaagttagaggtggaacggaaatcactttggatgctttagctgcatacctgaaataccta 1023 Query: 227 gaaggcacaggaaaggccagttggcaagagttgcatgataaggtgcgctttgctgaaacc 286 ||||| ||||| ||||| ||||||||||||||||||||||| || || || ||||||| Sbjct: 1024 gaaggaacagggaaggctagttggcaagagttgcatgataaagtacggttaactgaaact 1083 Query: 287 agggatggtgcttcgtttcgcac 309 || |||||||| |||||| |||| Sbjct: 1084 agagatggtgcctcgttttgcac 1106
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 167 gaagttagaggtggaacagatattacactggatgctttagatgcttacctgaaatacctc 226 ||||||||||||||||| || || || |||||||||||| ||| |||||||||||||| Sbjct: 20598264 gaagttagaggtggaacggaaatcactttggatgctttagctgcatacctgaaataccta 20598323 Query: 227 gaaggcacaggaaaggccagttggcaagagt 257 ||||| ||||| ||||| ||||||||||||| Sbjct: 20598324 gaaggaacagggaaggctagttggcaagagt 20598354
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 167 gaagttagaggtggaacagatattacactggatgctttagatgcttacctgaaatacctc 226 ||||||||||||||||| || || || |||||||||||| ||| |||||||||||||| Sbjct: 115911 gaagttagaggtggaacggaaatcactttggatgctttagctgcatacctgaaataccta 115970 Query: 227 gaaggcacaggaaaggccagttggcaagagt 257 ||||| ||||| ||||| ||||||||||||| Sbjct: 115971 gaaggaacagggaaggctagttggcaagagt 116001
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 167 gaagttagaggtggaacagatattacactggatgctttagatgcttacctgaaatacctc 226 ||||||||||||||||| || || || |||||||||||| ||| |||||||||||||| Sbjct: 63922 gaagttagaggtggaacggaaatcactttggatgctttagctgcatacctgaaataccta 63981 Query: 227 gaaggcacaggaaaggccagttggcaagagt 257 ||||| ||||| ||||| ||||||||||||| Sbjct: 63982 gaaggaacagggaaggctagttggcaagagt 64012
>gb|AC145691.5| Mus musculus chromosome 1, clone RP24-278B15, complete sequence Length = 164151 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcattcagaggaagattaa 51 ||||||||||||||||||||| Sbjct: 51098 cctcattcagaggaagattaa 51118
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cctgaaatacctcgaaggca 233 |||||||||||||||||||| Sbjct: 1213004 cctgaaatacctcgaaggca 1212985
>emb|AL049868.20|HSJ927M24 Human DNA sequence from clone RP5-927M24 on chromosome 20 Contains a novel gene (LOC128439), the 5' end of the gene for a novel protein (KIAA1219), the RPS3P2 gene for ribosomal protein S3 pseudogene 2 and a CpG island, complete sequence Length = 121922 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gaaggcacaggaaaggccag 246 |||||||||||||||||||| Sbjct: 5229 gaaggcacaggaaaggccag 5210
>emb|CR938099.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA2YK14AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 742 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aatgtttgcatcggaaagtt 161 |||||||||||||||||||| Sbjct: 291 aatgtttgcatcggaaagtt 310
>emb|BX322646.10| Zebrafish DNA sequence from clone DKEYP-11A1 in linkage group 14, complete sequence Length = 145265 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gaagattaaaagtaatgtct 62 |||||||||||||||||||| Sbjct: 62374 gaagattaaaagtaatgtct 62355
>dbj|AK091209.1| Homo sapiens cDNA FLJ33890 fis, clone CTONG2007474 Length = 3085 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gaaggcacaggaaaggccag 246 |||||||||||||||||||| Sbjct: 1081 gaaggcacaggaaaggccag 1062
>emb|BX470241.5| Zebrafish DNA sequence from clone CH211-240J13 in linkage group 14, complete sequence Length = 163257 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gaagattaaaagtaatgtct 62 |||||||||||||||||||| Sbjct: 114059 gaagattaaaagtaatgtct 114078
>emb|BX120012.24| Zebrafish DNA sequence from clone CH211-205H19, complete sequence Length = 152578 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ggaggaaaatagcaggttca 142 |||||||||||||||||||| Sbjct: 136345 ggaggaaaatagcaggttca 136364
>emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, complete sequence Length = 167232 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cagaggaagattaaaagtaa 57 |||||||||||||||||||| Sbjct: 23626 cagaggaagattaaaagtaa 23607
>emb|BX005021.4| Zebrafish DNA sequence from clone DKEY-69D12, complete sequence Length = 188337 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gaagattaaaagtaatgtct 62 |||||||||||||||||||| Sbjct: 13729 gaagattaaaagtaatgtct 13710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,477,407 Number of Sequences: 3902068 Number of extensions: 2477407 Number of successful extensions: 41924 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41882 Number of HSP's gapped (non-prelim): 42 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)