ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal21c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 196 bits (99), Expect = 1e-47 Identities = 131/142 (92%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 329 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 388 Query: 61 tcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagt 120 |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 389 tcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaagt 448 Query: 121 acgcgtgctctgaggaagtccc 142 | |||||||| ||||||||||| Sbjct: 449 atgcgtgctccgaggaagtccc 470
>gb|AY188797.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1566 Score = 196 bits (99), Expect = 1e-47 Identities = 131/142 (92%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 479 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 538 Query: 61 tcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagt 120 |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 539 tcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaagt 598 Query: 121 acgcgtgctctgaggaagtccc 142 | |||||||| ||||||||||| Sbjct: 599 atgcgtgctccgaggaagtccc 620
>dbj|AK119209.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E03, full insert sequence Length = 1605 Score = 196 bits (99), Expect = 1e-47 Identities = 131/142 (92%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 545 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 604 Query: 61 tcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagt 120 |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 605 tcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaagt 664 Query: 121 acgcgtgctctgaggaagtccc 142 | |||||||| ||||||||||| Sbjct: 665 atgcgtgctccgaggaagtccc 686
>dbj|AK062081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F10, full insert sequence Length = 1454 Score = 196 bits (99), Expect = 1e-47 Identities = 131/142 (92%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 457 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 516 Query: 61 tcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagt 120 |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 517 tcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaagt 576 Query: 121 acgcgtgctctgaggaagtccc 142 | |||||||| ||||||||||| Sbjct: 577 atgcgtgctccgaggaagtccc 598
>dbj|AK065773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M24, full insert sequence Length = 1541 Score = 188 bits (95), Expect = 3e-45 Identities = 130/142 (91%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 390 ggacggcgtcgtgcggcggcaccgcatgcgtcaactccttcggtgacgagcagctcgccg 449 Query: 61 tcgacatgctcgccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagt 120 |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 450 tcgatatgctcgccgacaagctcctcttcgaggctctggaatactctcatgtctgcaagt 509 Query: 121 acgcgtgctctgaggaagtccc 142 | |||||||| ||||||||||| Sbjct: 510 atgcgtgctccgaggaagtccc 531
>emb|X65540.1|TASH17BP T.aestivum gene for sedoheptulose-1,7-bisphoshatase Length = 3143 Score = 163 bits (82), Expect = 2e-37 Identities = 90/93 (96%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 ggacggcctcctgcggcggcacggcctgcgtcaactccttcggcgacgagcagctcgccg 598 Query: 61 tcgacatgctcgccgacaagctcctattcgagg 93 ||||||||||||||||||||||||| ||||||| Sbjct: 599 tcgacatgctcgccgacaagctcctcttcgagg 631 Score = 103 bits (52), Expect = 1e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 91 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgag 146 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 aggcgttggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccccgag 772
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 147 bits (74), Expect = 1e-32 Identities = 88/93 (94%) Strand = Plus / Minus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119854 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 119795 Query: 61 tcgacatgctcgccgacaagctcctattcgagg 93 |||| |||||||||||||||||||| ||||||| Sbjct: 119794 tcgatatgctcgccgacaagctcctcttcgagg 119762 Score = 56.0 bits (28), Expect = 3e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 91 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccc 142 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 119649 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtccc 119598
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 147 bits (74), Expect = 1e-32 Identities = 88/93 (94%) Strand = Plus / Minus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9035120 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 9035061 Query: 61 tcgacatgctcgccgacaagctcctattcgagg 93 |||| |||||||||||||||||||| ||||||| Sbjct: 9035060 tcgatatgctcgccgacaagctcctcttcgagg 9035028 Score = 56.0 bits (28), Expect = 3e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 91 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccc 142 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 9034915 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtccc 9034864
>gb|AY188798.1| Oryza sativa (indica cultivar-group) sedoheptulose-1,7-bisphosphatase precursor, gene, complete cds; nuclear gene for chloroplast product Length = 2594 Score = 147 bits (74), Expect = 1e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccg 60 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 672 ggacggcgtcgtgcggcggcaccgcctgcgtcaactccttcggtgacgagcagctcgccg 731 Query: 61 tcgacatgctcgccgacaagctcctattcgagg 93 |||| |||||||||||||||||||| ||||||| Sbjct: 732 tcgatatgctcgccgacaagctcctcttcgagg 764 Score = 56.0 bits (28), Expect = 3e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 91 aggcgctggagtactcccatgtgtgcaagtacgcgtgctctgaggaagtccc 142 |||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 877 aggctctggaatactctcatgtctgcaagtatgcgtgctccgaggaagtccc 928
>dbj|AB035313.1| Chlamydomonas sp. W80 sbp-1 mRNA for sedoheptulose-1,7-bisphosphatase, complete cds Length = 1361 Score = 101 bits (51), Expect = 6e-19 Identities = 114/135 (84%) Strand = Plus / Plus Query: 12 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 71 |||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||| | Sbjct: 313 tgcggcggcaccgcgtgcgtgaactcgttcggcgacgagcagctggccgtcgacatggtg 372 Query: 72 gccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaagtacgcgtgctct 131 |||||| |||| |||||||| || ||||||| || |||||| |||||||||||| Sbjct: 373 gccgacggcatcctgttcgaggccctcaagtactcgcacgtgtgctcgtacgcgtgctcc 432 Query: 132 gaggaagtccccgag 146 ||||| || |||||| Sbjct: 433 gaggaggtgcccgag 447
>emb|X74418.1|CRCSBP C.reinhardtii csbp mRNA for sedoheptulose-bisphosphatas Length = 1610 Score = 87.7 bits (44), Expect = 8e-15 Identities = 92/108 (85%) Strand = Plus / Plus Query: 12 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 71 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 348 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 407 Query: 72 gccgacaagctcctattcgaggcgctggagtactcccatgtgtgcaag 119 || |||||||| || |||||||| ||| ||||||| || ||||||||| Sbjct: 408 gctgacaagctgctgttcgaggccctgaagtactcgcacgtgtgcaag 455
>emb|Y14608.1|CRCSBPGEN Chlamydomonas reinhardtii Csbp gene Length = 4222 Score = 77.8 bits (39), Expect = 8e-12 Identities = 81/95 (85%) Strand = Plus / Plus Query: 12 tgcggcggcaccgcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctc 71 |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||||||||| | Sbjct: 2019 tgcgccggtaccgcctgcgtgaacagcttcggcgatgagcagctggccgtcgacatggtg 2078 Query: 72 gccgacaagctcctattcgaggcgctggagtactc 106 || |||||||| || |||||||| ||| ||||||| Sbjct: 2079 gctgacaagctgctgttcgaggccctgaagtactc 2113
>gb|AY123067.1| Griffithsia japonica sedoheptulose-1,7-bisphosphatase mRNA, partial cds Length = 594 Score = 73.8 bits (37), Expect = 1e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 24 gcctgcgtcaactccttcggcgacgagcagctcgccgtcgacatgctcgccgacaag 80 |||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 304 gcctgcttcaacgacttcggcgacgagcagctcgccatcgacgtgctcgccgacaag 360
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.007 Identities = 24/24 (100%) Strand = Plus / Plus Query: 13 gcggcggcaccgcctgcgtcaact 36 |||||||||||||||||||||||| Sbjct: 410944 gcggcggcaccgcctgcgtcaact 410967
>ref|NM_210888.1| Eremothecium gossypii AFL014Cp (AFL014C), mRNA Length = 1674 Score = 48.1 bits (24), Expect = 0.007 Identities = 24/24 (100%) Strand = Plus / Minus Query: 13 gcggcggcaccgcctgcgtcaact 36 |||||||||||||||||||||||| Sbjct: 226 gcggcggcaccgcctgcgtcaact 203
>ref|NM_115438.3| Arabidopsis thaliana SBPASE; phosphoric ester hydrolase AT3G55800 (SBPASE) mRNA, complete cds Length = 1655 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 tactcccatgtgtgcaagtacgcgtgctctgaggaagt 139 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 690 tactcgcatgtgtgcaagtatgcttgctctgaagaagt 727
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 tactcccatgtgtgcaagtacgcgtgctctgaggaagt 139 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 98434 tactcgcatgtgtgcaagtatgcttgctctgaagaagt 98471
>gb|AY128737.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800) mRNA, complete cds Length = 1245 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 tactcccatgtgtgcaagtacgcgtgctctgaggaagt 139 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 436 tactcgcatgtgtgcaagtatgcttgctctgaagaagt 473
>gb|S74719.1| sedoheptulose-1,7-bisphosphatase [Arabidopsis thaliana, C24, Genomic, 2747 nt] Length = 2747 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 tactcccatgtgtgcaagtacgcgtgctctgaggaagt 139 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 1523 tactcgcatgtgtgcaagtatgcttgctctgaagaagt 1560
>gb|AY054669.1| Arabidopsis thaliana sedoheptulose-bisphosphatase precursor (At3g55800; F1I16_210) mRNA, complete cds Length = 1327 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 tactcccatgtgtgcaagtacgcgtgctctgaggaagt 139 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 482 tactcgcatgtgtgcaagtatgcttgctctgaagaagt 519
>ref|XM_463740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 462 ctccttcggcgtcgagcagctcgcc 486
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 76712 ctccttcggcgtcgagcagctcgcc 76736
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 6551 ctccttcggcgtcgagcagctcgcc 6575
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 1869164 ctccttcggcgtcgagcagctcgcc 1869188
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 1934996 ctccttcggcgtcgagcagctcgcc 1935020
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 10614253 ctccttcggcgtcgagcagctcgcc 10614229
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 41848137 ctccttcggcgtcgagcagctcgcc 41848113 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 cgacgagcagctcgccgtc 62 ||||||||||||||||||| Sbjct: 31725995 cgacgagcagctcgccgtc 31726013
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 91513 ctccttcggcgtcgagcagctcgcc 91489
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 41893 ctccttcggcgtcgagcagctcgcc 41869
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 1942777 ctccttcggcgtcgagcagctcgcc 1942801
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 1869115 ctccttcggcgtcgagcagctcgcc 1869139
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 63882 ctccttcggcgtcgagcagctcgcc 63906
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 42.1 bits (21), Expect = 0.45 Identities = 24/25 (96%) Strand = Plus / Minus Query: 35 ctccttcggcgacgagcagctcgcc 59 ||||||||||| ||||||||||||| Sbjct: 99057 ctccttcggcgtcgagcagctcgcc 99033
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gacatgctcgccgacaagct 82 |||||||||||||||||||| Sbjct: 266915 gacatgctcgccgacaagct 266896
>ref|XM_949403.1| Theileria annulata strain Ankara ubiquitin-protein ligase 1 (TA19515) partial mRNA Length = 13257 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ccgcctgcgtcaactccttc 41 |||||||||||||||||||| Sbjct: 12314 ccgcctgcgtcaactccttc 12295
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 769 cgtcaactccttcggcgac 787
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 772 cgtcaactccttcggcgac 790
>ref|XM_464568.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 46 acgagcagctcgccgtcgacatgctcg 72 |||||| ||||||||||||| |||||| Sbjct: 371 acgagcggctcgccgtcgacgtgctcg 397
>ref|NM_191283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cgacgagcagctcgccgtc 62 ||||||||||||||||||| Sbjct: 115 cgacgagcagctcgccgtc 97
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 41 cggcgacgagcagctcgccgtcg 63 ||||||||||| ||||||||||| Sbjct: 862602 cggcgacgagccgctcgccgtcg 862624
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 41 cggcgacgagcagctcgccgtcg 63 ||||||||||| ||||||||||| Sbjct: 1879212 cggcgacgagccgctcgccgtcg 1879234
>ref|XM_744598.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05620) partial mRNA Length = 2241 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 22 ccgcctgcgtcaactccttcggc 44 |||||||||||| |||||||||| Sbjct: 628 ccgcctgcgtcatctccttcggc 606
>ref|XM_539588.2| PREDICTED: Canis familiaris similar to EPH receptor A10 isoform 1 (LOC482471), mRNA Length = 2586 Score = 38.2 bits (19), Expect = 7.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 ggacggcntcctgcggcggcac 22 ||||||| |||||||||||||| Sbjct: 1677 ggacggcttcctgcggcggcac 1698
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 41 cggcgacgagcagctcgccgtcg 63 ||||||||||| ||||||||||| Sbjct: 2485711 cggcgacgagccgctcgccgtcg 2485689
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 cgagcagctcgccgtcgac 65 ||||||||||||||||||| Sbjct: 3612 cgagcagctcgccgtcgac 3594
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 cgtcgacatgctcgccgac 77 ||||||||||||||||||| Sbjct: 191121 cgtcgacatgctcgccgac 191139
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 cgtcgacatgctcgccgac 77 ||||||||||||||||||| Sbjct: 36641 cgtcgacatgctcgccgac 36659
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 cgtcgacatgctcgccgac 77 ||||||||||||||||||| Sbjct: 43248 cgtcgacatgctcgccgac 43266
>gb|AE012334.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 242 of 460 of the complete genome Length = 11004 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 13 gcggcggcaccgcctgcgtcaac 35 ||||||||||| ||||||||||| Sbjct: 7903 gcggcggcaccacctgcgtcaac 7881
>gb|AF307105.1|AF307105 Tetraodon fluviatilis STAT1 mRNA, complete cds Length = 2404 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 acatgctcgccgacaagct 82 ||||||||||||||||||| Sbjct: 1566 acatgctcgccgacaagct 1584
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 13 gcggcggcaccgcctgcgtcaac 35 ||||||||||| ||||||||||| Sbjct: 2239836 gcggcggcaccacctgcgtcaac 2239858
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 cctgcgtcaactccttcggcgac 47 |||||||||| |||||||||||| Sbjct: 3246588 cctgcgtcaattccttcggcgac 3246610
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 31825406 cgtcaactccttcggcgac 31825424 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 46 acgagcagctcgccgtcgacatgctcg 72 |||||| ||||||||||||| |||||| Sbjct: 6002260 acgagcggctcgccgtcgacgtgctcg 6002286 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 46 acgagcagctcgccgtcgacatgctcg 72 |||||| ||||||||||||| |||||| Sbjct: 5977790 acgagcggctcgccgtcgacgtgctcg 5977764
>gb|AY228177.1|AY228176S2 Streptomyces WP 4669 PD 116740 angucycline type II polyketide synthase gene cluster, partial sequence Length = 5495 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 gtcaactccttcggcgacg 48 ||||||||||||||||||| Sbjct: 2598 gtcaactccttcggcgacg 2616
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 cgacgagcagctcgccgtc 62 ||||||||||||||||||| Sbjct: 139727 cgacgagcagctcgccgtc 139745
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 cgacgagcagctcgccgtc 62 ||||||||||||||||||| Sbjct: 4033 cgacgagcagctcgccgtc 4051
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 ttcggcgacgagcagctcg 57 ||||||||||||||||||| Sbjct: 2822686 ttcggcgacgagcagctcg 2822704
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 7.0 Identities = 31/35 (88%) Strand = Plus / Minus Query: 44 cgacgagcagctcgccgtcgacatgctcgccgaca 78 ||||| || ||| ||||||||||| |||||||||| Sbjct: 6202942 cgacgtgccgctggccgtcgacatcctcgccgaca 6202908
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 cgtcgacatgctcgccgac 77 ||||||||||||||||||| Sbjct: 3500190 cgtcgacatgctcgccgac 3500172
>dbj|AP005917.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0235A04 Length = 23787 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 46 acgagcagctcgccgtcgacatgctcg 72 |||||| ||||||||||||| |||||| Sbjct: 8172 acgagcggctcgccgtcgacgtgctcg 8146
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 38.2 bits (19), Expect = 7.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 46 acgagcagctcgccgtcgacatgctcg 72 |||||| ||||||||||||| |||||| Sbjct: 23099 acgagcggctcgccgtcgacgtgctcg 23125
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 121204 cgtcaactccttcggcgac 121222
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 769 cgtcaactccttcggcgac 787
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cgtcaactccttcggcgac 47 ||||||||||||||||||| Sbjct: 772 cgtcaactccttcggcgac 790
>dbj|AK069648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026P15, full insert sequence Length = 963 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cgacgagcagctcgccgtc 62 ||||||||||||||||||| Sbjct: 214 cgacgagcagctcgccgtc 196
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 7.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 ctcgccgtcgacatgctcgccga 76 ||||| ||||||||||||||||| Sbjct: 5051385 ctcgcagtcgacatgctcgccga 5051407
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 ggcgctggagtactcccat 110 ||||||||||||||||||| Sbjct: 858283 ggcgctggagtactcccat 858265 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 732,616 Number of Sequences: 3902068 Number of extensions: 732616 Number of successful extensions: 57035 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54896 Number of HSP's gapped (non-prelim): 2138 length of query: 146 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 125 effective length of database: 17,151,101,840 effective search space: 2143887730000 effective search space used: 2143887730000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
