>TILS_WOLPM (Q73FR9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 431

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 137 SVNAPL-EPQTWEGSFLCGLLKNQPQIFLVAAARQLQQLSIQRKD 268
           +VN PL EP  W+  F C +L NQ    ++A  ++ Q++    KD
Sbjct: 331 TVNLPLNEPTQWDNRFSCTILGNQGCSVIIAPLKKTQKVPEFLKD 375

>CH601_RHOSH (P20110) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 546

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 50  DMLNRRSKCTSRKLLTTVTGAKGDESEFDSVNAPLEPQTWEGS 178
           DML R  K +  K  TT+    GD++E D+  A +  Q  E S
Sbjct: 314 DMLGRAKKISINKDNTTIVDGNGDKAEIDARVAQIRNQIEETS 356

>WDR19_HUMAN (Q8NEZ3) WD-repeat protein 19|
          Length = 1342

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +2

Query: 188  GLLKNQPQIFLVAAARQLQQLSIQRKDTLTRWEHSIGS---PEDCLHRRIAEMKEQECRT 358
            G+ K+   +F +  A +  + + Q    + R E S G+     D L    AE+K Q+ + 
Sbjct: 1084 GMPKDAKYLFRLYMALKQYREAAQTAIIIAREEQSAGNYRNAHDVLFSMYAELKSQKIKI 1143

Query: 359  AIEDVMYMLIVHKYSKIEV 415
              E    ++I+H Y  +++
Sbjct: 1144 PSEMATNLMILHSYILVKI 1162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,277,878
Number of Sequences: 219361
Number of extensions: 1550511
Number of successful extensions: 3950
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3950
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)