ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20l22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC149281.2| Mus musculus BAC clone RP23-287D14 from 19, complete sequence Length = 188944 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 tatgacctgaagaggaaaggcag 492 ||||||||||||||||||||||| Sbjct: 56499 tatgacctgaagaggaaaggcag 56477
>ref|XM_468505.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2460 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 48 cagagaaggatgattgggtgcctcgcagagctgcaccttttatatggctgaatcgtga 105 |||| |||||||| ||||| |||| || | |||||||||||| ||||| |||||||| Sbjct: 1808 cagaaaaggatgactgggtacctctcaaggatgcaccttttatttggctcaatcgtga 1865
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 48 cagagaaggatgattgggtgcctcgcagagctgcaccttttatatggctgaatcgtga 105 |||| |||||||| ||||| |||| || | |||||||||||| ||||| |||||||| Sbjct: 35585231 cagaaaaggatgactgggtacctctcaaggatgcaccttttatttggctcaatcgtga 35585288
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 44.1 bits (22), Expect = 0.52 Identities = 49/58 (84%) Strand = Plus / Plus Query: 48 cagagaaggatgattgggtgcctcgcagagctgcaccttttatatggctgaatcgtga 105 |||| |||||||| ||||| |||| || | |||||||||||| ||||| |||||||| Sbjct: 101623 cagaaaaggatgactgggtacctctcaaggatgcaccttttatttggctcaatcgtga 101680
>ref|XM_448312.1| Candida glabrata CBS138, CAGL0K01991g partial mRNA Length = 2019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 ttgtcgagaagatgaaggaga 581 ||||||||||||||||||||| Sbjct: 1727 ttgtcgagaagatgaaggaga 1747
>gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome 6, complete sequence Length = 204570 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 506 gtgatgtgtttggggaggaagatga 530 |||||||||||||||| |||||||| Sbjct: 171240 gtgatgtgtttggggaagaagatga 171216
>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence Length = 211296 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 gaaaagacacggcatattgtc 565 ||||||||||||||||||||| Sbjct: 7882 gaaaagacacggcatattgtc 7862
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 gaaaagacacggcatattgtc 565 ||||||||||||||||||||| Sbjct: 98798 gaaaagacacggcatattgtc 98778
>ref|XM_790661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591081 (LOC591081), mRNA Length = 1680 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 gcaagcagtcatagttcaggcatgg 143 |||||||||||||||||| |||||| Sbjct: 1638 gcaagcagtcatagttcaagcatgg 1662
>emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12 Length = 1333 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 agaagcgacgacgaaccgctg 223 ||||||||||||||||||||| Sbjct: 993 agaagcgacgacgaaccgctg 1013
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 ttgtcgagaagatgaaggaga 581 ||||||||||||||||||||| Sbjct: 174866 ttgtcgagaagatgaaggaga 174886
>gb|AC074029.15| Homo sapiens 12 BAC RP11-474C8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160943 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgaggaagatgcttctgaaaa 378 ||||||||||||||||||||| Sbjct: 153193 cgaggaagatgcttctgaaaa 153173
>dbj|AK056127.1| Homo sapiens cDNA FLJ31565 fis, clone NT2RI2001474 Length = 1859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 cgaggaagatgcttctgaaaa 378 ||||||||||||||||||||| Sbjct: 141 cgaggaagatgcttctgaaaa 121
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 agttgatggcgccgctgctga 344 ||||||||||||||||||||| Sbjct: 1830721 agttgatggcgccgctgctga 1830701
>gb|AC153960.3| Mus musculus 10 BAC RP24-210O10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162022 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 gaaaagacacggcatattgtc 565 ||||||||||||||||||||| Sbjct: 150293 gaaaagacacggcatattgtc 150273
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 agttgatggcgccgctgctga 344 ||||||||||||||||||||| Sbjct: 1904175 agttgatggcgccgctgctga 1904155
>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10, complete sequence Length = 243665 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 aagatgcttctgaaaatgcag 383 ||||||||||||||||||||| Sbjct: 186946 aagatgcttctgaaaatgcag 186926
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 agttgatggcgccgctgctga 344 ||||||||||||||||||||| Sbjct: 23638 agttgatggcgccgctgctga 23658
>ref|NM_105688.2| Arabidopsis thaliana nucleic acid binding AT1G70200 mRNA, complete cds Length = 1883 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaagatgaaggagagttct 586 |||||||||||||||||||| Sbjct: 364 agaagatgaaggagagttct 383
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 taccttcagaaggtgaactt 316 |||||||||||||||||||| Sbjct: 22516 taccttcagaaggtgaactt 22535
>ref|NM_010777.3| Mus musculus myelin basic protein (Mbp), transcript variant 7, mRNA Length = 2531 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 425 gtgatgtgtttggggaggcagatg 448
>ref|NM_001025245.1| Mus musculus myelin basic protein (Mbp), transcript variant 8, mRNA Length = 4820 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 425 gtgatgtgtttggggaggcagatg 448
>ref|NM_001025289.1| Rattus norvegicus myelin basic protein (Mbp), transcript variant 6, mRNA Length = 1495 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 366 gtgatgtgtttggggaggcagatg 389
>gb|AC154398.6| Mus musculus chromosome 1, clone RP24-372I12, complete sequence Length = 178664 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aagaaccaagaacagaagca 274 |||||||||||||||||||| Sbjct: 96546 aagaaccaagaacagaagca 96527
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 tgtcgagaagatgaaggaga 581 |||||||||||||||||||| Sbjct: 217070 tgtcgagaagatgaaggaga 217089
>emb|X67319.1|MMHMBPRG M.musculus mRNA for transcript overlapping myelin basic protein gene Length = 4670 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 297 gtgatgtgtttggggaggcagatg 320
>emb|CR729248.2|CNS0GPMU Tetraodon nigroviridis full-length cDNA Length = 1558 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctcttcagttaggagtggtggtac 419 |||||||||| ||||||||||||| Sbjct: 863 ctcttcagtttggagtggtggtac 840
>emb|CR724720.2|CNS0GM52 Tetraodon nigroviridis full-length cDNA Length = 1569 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctcttcagttaggagtggtggtac 419 |||||||||| ||||||||||||| Sbjct: 858 ctcttcagtttggagtggtggtac 835
>emb|CR722304.2|CNS0GK9Y Tetraodon nigroviridis full-length cDNA Length = 1043 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctcttcagttaggagtggtggtac 419 |||||||||| ||||||||||||| Sbjct: 818 ctcttcagtttggagtggtggtac 795
>emb|CR638885.2|CNS0ERXN Tetraodon nigroviridis full-length cDNA Length = 1066 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 ctcttcagttaggagtggtggtac 419 |||||||||| ||||||||||||| Sbjct: 841 ctcttcagtttggagtggtggtac 818
>emb|AL451061.8| Human DNA sequence from clone RP11-291C6 on chromosome 6 Contains an alpha-methylacyl-CoA racemase (AMACR) pseudogene and a CpG island, complete sequence Length = 91503 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 atgtgtttggggaggaagat 528 |||||||||||||||||||| Sbjct: 13750 atgtgtttggggaggaagat 13769
>emb|AL159985.11| Human DNA sequence from clone RP11-22L21 on chromosome 6 Contains a novel gene (HSPC125, my013, FLJ22592) and two CpG islands, complete sequence Length = 114521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aagaacagaagcatcaacca 281 |||||||||||||||||||| Sbjct: 42921 aagaacagaagcatcaacca 42902
>emb|CR936874.1| Homo sapiens mRNA; cDNA DKFZp686J1430 (from clone DKFZp686J1430) Length = 4960 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagtgggctcttctct 399 |||||||||||||||||||| Sbjct: 4232 gcagcagtgggctcttctct 4251
>gb|AC092984.3| Homo sapiens 3 BAC RP11-113N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116831 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 aaaatgcagcagtgggctct 394 |||||||||||||||||||| Sbjct: 83744 aaaatgcagcagtgggctct 83763
>gb|BC084713.1| Rattus norvegicus myelin basic protein, transcript variant 6, mRNA (cDNA clone MGC:105460 IMAGE:7303731), complete cds Length = 1495 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 366 gtgatgtgtttggggaggcagatg 389
>gb|BC051094.1| Mus musculus myelin basic protein, transcript variant 8, mRNA (cDNA clone MGC:58924 IMAGE:3982852), complete cds Length = 1368 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 356 gtgatgtgtttggggaggcagatg 379
>emb|BX942837.5| Zebrafish DNA sequence from clone CH211-224B23 in linkage group 5, complete sequence Length = 183605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tctgaaaatgcagcagtggg 390 |||||||||||||||||||| Sbjct: 52804 tctgaaaatgcagcagtggg 52823
>gb|DQ093965.1| Homo sapiens serine/threonine kinase 25 (STE20 homolog, yeast) (STK25) gene, complete cds Length = 16019 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagtgggctcttctct 399 |||||||||||||||||||| Sbjct: 14686 gcagcagtgggctcttctct 14705
>gb|AC012289.12| Homo sapiens chromosome 18, clone RP11-7E6, complete sequence Length = 165022 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 aaccaagaacagaagcatca 277 |||||||||||||||||||| Sbjct: 16016 aaccaagaacagaagcatca 15997
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ttctgaaaatgcagcagtgg 389 |||||||||||||||||||| Sbjct: 73796 ttctgaaaatgcagcagtgg 73815
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 aaatgcagcagtgggctctt 395 |||||||||||||||||||| Sbjct: 106510 aaatgcagcagtgggctctt 106491
>dbj|AK040716.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530019K13 product:myelin basic protein, full insert sequence Length = 4720 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 324 gtgatgtgtttggggaggcagatg 347
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 ctgctgggcatcggcggccg 439 |||||||||||||||||||| Sbjct: 4306081 ctgctgggcatcggcggccg 4306100
>dbj|AK039047.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230090C03 product:myelin basic protein, full insert sequence Length = 4745 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 366 gtgatgtgtttggggaggcagatg 389
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 attcccatgtcctggatgatatcagaga 53 |||||||| |||||||||||||||||| Sbjct: 22419745 attcccatcacctggatgatatcagaga 22419718
>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR22N13, complete sequence Length = 177376 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggggaggaagatgagcggca 536 |||||||||||||||||||| Sbjct: 75125 ggggaggaagatgagcggca 75144
>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence Length = 173381 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tgtgtttggggaggaagatg 529 |||||||||||||||||||| Sbjct: 161248 tgtgtttggggaggaagatg 161267
>gb|AC110299.3| Homo sapiens BAC clone RP11-491D2 from 2, complete sequence Length = 81704 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 gcagcagtgggctcttctct 399 |||||||||||||||||||| Sbjct: 66517 gcagcagtgggctcttctct 66536
>gb|BT005155.1| Arabidopsis thaliana clone U20367 unknown protein (At1g70200) mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaagatgaaggagagttct 586 |||||||||||||||||||| Sbjct: 315 agaagatgaaggagagttct 334
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 cgacgacgaaccgctgaaga 227 |||||||||||||||||||| Sbjct: 6117869 cgacgacgaaccgctgaaga 6117850
>gb|BT003858.1| Arabidopsis thaliana clone RAFL14-86-J02 (R20367) unknown protein (At1g70200) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaagatgaaggagagttct 586 |||||||||||||||||||| Sbjct: 364 agaagatgaaggagagttct 383
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 attcccatgtcctggatgatatcagaga 53 |||||||| |||||||||||||||||| Sbjct: 116728 attcccatcacctggatgatatcagaga 116701
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 attcccatgtcctggatgatatcagaga 53 |||||||| |||||||||||||||||| Sbjct: 14673 attcccatcacctggatgatatcagaga 14646
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 gtacctgctgggcatcggcg 435 |||||||||||||||||||| Sbjct: 3308301 gtacctgctgggcatcggcg 3308282
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 ttgtcgagaagatgaaggag 580 |||||||||||||||||||| Sbjct: 1529597 ttgtcgagaagatgaaggag 1529578
>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the complete sequence Length = 214365 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 ggggaggaagatgagcggca 536 |||||||||||||||||||| Sbjct: 54749 ggggaggaagatgagcggca 54768
>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete sequences Length = 191362 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 aaccaagaacagaagcatcaaccagctc 285 ||||||||||||||| | |||||||||| Sbjct: 169777 aaccaagaacagaagaaccaaccagctc 169750
>gb|AC144921.12| Mus musculus chromosome 1, clone RP24-214P19, complete sequence Length = 188960 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 aagaaccaagaacagaagca 274 |||||||||||||||||||| Sbjct: 186459 aagaaccaagaacagaagca 186440
>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete sequence Length = 114505 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 agaagatgaaggagagttct 586 |||||||||||||||||||| Sbjct: 28651 agaagatgaaggagagttct 28670
>gb|L07508.1|MUSGOLLIB Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone BG21) Length = 1407 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 402 gtgatgtgtttggggaggcagatg 425
>gb|L07507.1|MUSGOLLIA Mouse Golli-mpb mRNA, complete cds (alternate transcript from clone J37.) Length = 2490 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 gtgatgtgtttggggaggaagatg 529 |||||||||||||||||| ||||| Sbjct: 385 gtgatgtgtttggggaggcagatg 408 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,786,830 Number of Sequences: 3902068 Number of extensions: 5786830 Number of successful extensions: 117817 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117462 Number of HSP's gapped (non-prelim): 355 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
