>ETF1_SFVKA (P32096) Early transcription factor 70 kDa subunit (EC 3.6.1.-)|
           (ATP-dependent helicase VETFS) (VETF small subunit)
          Length = 635

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +1

Query: 361 LDSYSGEELNSQRFDHSVAQIIPLILKDSSEQRLHLIVDSNSNAHLYPRSPDALNSFMTE 540
           LD YS EE+N+  FD  + +++ L  K     R++ I++S S+++  P  P  +   + E
Sbjct: 486 LDDYSLEEINTLPFD--IKKLLYLKFKTKETNRIYSILESISDSYTQPPHPHIVEIVLGE 543

Query: 541 MSNQYFY 561
           +  Q+FY
Sbjct: 544 IVRQFFY 550

>ETF1_MYXVL (Q9Q8L9) Early transcription factor 70 kDa subunit (EC 3.6.1.-)|
           (ATP-dependent helicase VETFS) (VETF small subunit)
          Length = 635

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = +1

Query: 361 LDSYSGEELNSQRFDHSVAQIIPLILKDSSEQRLHLIVDSNSNAHLYPRSPDALNSFMTE 540
           LD YS EE+N+  FD  + +++ L  K     R++ I+++ S+++  P  P  +   + E
Sbjct: 486 LDDYSLEEINTLPFD--IKKLLYLKFKTKETNRIYSILENISDSYTQPPHPHIVEIVLGE 543

Query: 541 MSNQYFY 561
           +  Q+FY
Sbjct: 544 IVRQFFY 550

>YOS1_SCHPO (P87319) Hypothetical protein C21C3.01c in chromosome II|
          Length = 3011

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
 Frame = +1

Query: 379  EELNSQRFDHSVAQIIPLILKDSSEQRLHLIVDSNSN----AHLYPRSPDAL-NSFMTEM 543
            E L   R +     I PLI  D  E + +++VD N       H+  RSP  L N    E+
Sbjct: 1875 ESLRHVRVNRVGEHIYPLISYDQDELKHYMVVDVNLGEDYIKHITLRSPLLLINETQMEI 1934

Query: 544  SNQYFYSVDIQKNAIRGYSLQKSCDFDSGDTY 639
               +  S  IQ++ I   S ++SC       Y
Sbjct: 1935 DVVFCDSDGIQRSQIYHMSPEESCSLPIETAY 1966

>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1|
           precursor (Down syndrome cell adhesion molecule 2)
          Length = 2053

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 472 VDSNSNAHLYPRSPDALNSFMTEMSNQYFYSVDIQKNAIRGYSLQKSCDF 621
           V +N    LYP SP A NSF+ +  N YF + +     IR  +++    F
Sbjct: 76  VHANGTLQLYPFSPSAFNSFIHD--NDYFCTAENAAGKIRSPNIRVKAVF 123

>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +1

Query: 100  RDHNGFRKLLIVLTKAGKVIALHTGDGRIIWSNLLPSLRASKSGEMPSALRIYQWQ-VPH 276
            +DH G    L +    GK I  H+G+     + +LP   A  +G +   +++ +W  VP 
Sbjct: 4450 KDHTGSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGESAEHTGPLMEGMQVLEWNGVPL 4509

Query: 277  HRVMRENPSILVVGRSGASSV 339
                 E    ++  +SG + +
Sbjct: 4510 TSKTYEEVQSIINQQSGEAEI 4530

>NH167_CAEEL (O17683) Nuclear hormone receptor family member nhr-167|
          Length = 343

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 430 LILKDSSEQRLHLIVDSNSNAHLYPRSPDALNSFMTEMSNQYFYSVDIQK 579
           L+L+ + EQRL + +D   N H   R     N F+TEM+      V++ K
Sbjct: 81  LVLEQNKEQRLAITIDCVRNTH-NKRMDSLFNFFVTEMNPNVDDIVELNK 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,038,524
Number of Sequences: 219361
Number of extensions: 1915361
Number of successful extensions: 5337
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5337
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)