| Clone Name | baal20l21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 424 bits (214), Expect = e-115 Identities = 520/618 (84%), Gaps = 3/618 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||| Sbjct: 109393 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 109452 Query: 63 cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121 || ||||| | | |||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 109453 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 109512 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 109513 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 109572 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 |||||||||||||||| ||||||| ||||||||| | || || ||||| |||||||||| Sbjct: 109573 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 109632 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 ||||||| || |||| ||||||||||| |||||||| || ||||||| ||||||||| | Sbjct: 109633 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 109692 Query: 302 ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360 |||||||| | | || ||||||||||| || | || ||||||||| ||||| | | || Sbjct: 109693 ccatacttatcattggtagatctggagc-agatagtgctgctcctggtgtcctatctgtt 109751 Query: 361 cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420 |||||||| ||||||||||| ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 109752 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 109811 Query: 421 attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480 ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 109812 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 109871 Query: 481 aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540 ||||| |||||| || |||||||||||||| |||||| | ||| |||| | |||| Sbjct: 109872 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 109931 Query: 541 atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600 ||| ||||| ||| |||| | || |||||| ||| ||||| |||||| ||| ||||| Sbjct: 109932 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 109991 Query: 601 ttacagaaatcatgtgac 618 ||||| || ||||||||| Sbjct: 109992 ttacaaaagtcatgtgac 110009
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 424 bits (214), Expect = e-115 Identities = 520/618 (84%), Gaps = 3/618 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||| Sbjct: 16582 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 16641 Query: 63 cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121 || ||||| | | |||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 16642 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 16701 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 16702 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 16761 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 |||||||||||||||| ||||||| ||||||||| | || || ||||| |||||||||| Sbjct: 16762 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 16821 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 ||||||| || |||| ||||||||||| |||||||| || ||||||| ||||||||| | Sbjct: 16822 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 16881 Query: 302 ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360 |||||||| | | || |||||||||| ||| | || ||||||||| ||||| | | || Sbjct: 16882 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 16940 Query: 361 cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420 |||||||| ||||||||||| ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 16941 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 17000 Query: 421 attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480 ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 17001 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 17060 Query: 481 aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540 ||||| |||||| || |||||||||||||| |||||| | ||| |||| | |||| Sbjct: 17061 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 17120 Query: 541 atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600 ||| ||||| ||| |||| | || |||||| ||| ||||| |||||| ||| ||||| Sbjct: 17121 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 17180 Query: 601 ttacagaaatcatgtgac 618 ||||| || ||||||||| Sbjct: 17181 ttacaaaagtcatgtgac 17198
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 424 bits (214), Expect = e-115 Identities = 520/618 (84%), Gaps = 3/618 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||| Sbjct: 7831807 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 7831866 Query: 63 cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121 || ||||| | | |||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 7831867 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 7831926 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 7831927 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 7831986 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 |||||||||||||||| ||||||| ||||||||| | || || ||||| |||||||||| Sbjct: 7831987 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 7832046 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 ||||||| || |||| ||||||||||| |||||||| || ||||||| ||||||||| | Sbjct: 7832047 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 7832106 Query: 302 ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360 |||||||| | | || |||||||||| ||| | || ||||||||| ||||| | | || Sbjct: 7832107 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 7832165 Query: 361 cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420 |||||||| ||||||||||| ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 7832166 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 7832225 Query: 421 attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480 ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 7832226 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 7832285 Query: 481 aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540 ||||| |||||| || |||||||||||||| |||||| | ||| |||| | |||| Sbjct: 7832286 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 7832345 Query: 541 atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600 ||| ||||| ||| |||| | || |||||| ||| ||||| |||||| ||| ||||| Sbjct: 7832346 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 7832405 Query: 601 ttacagaaatcatgtgac 618 ||||| || ||||||||| Sbjct: 7832406 ttacaaaagtcatgtgac 7832423
>dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G06, full insert sequence Length = 3440 Score = 424 bits (214), Expect = e-115 Identities = 520/618 (84%), Gaps = 3/618 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||| Sbjct: 1459 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 1518 Query: 63 cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121 || ||||| | | |||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 1519 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 1578 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 1579 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 1638 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 |||||||||||||||| ||||||| ||||||||| | || || ||||| |||||||||| Sbjct: 1639 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 1698 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 ||||||| || |||| ||||||||||| |||||||| || ||||||| ||||||||| | Sbjct: 1699 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 1758 Query: 302 ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360 |||||||| | | || |||||||||| ||| | || ||||||||| ||||| | | || Sbjct: 1759 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 1817 Query: 361 cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420 |||||||| ||||||||||| ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 1818 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 1877 Query: 421 attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480 ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1878 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 1937 Query: 481 aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540 ||||| |||||| || |||||||||||||| |||||| | ||| |||| | |||| Sbjct: 1938 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 1997 Query: 541 atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600 ||| ||||| ||| |||| | || |||||| ||| ||||| |||||| ||| ||||| Sbjct: 1998 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 2057 Query: 601 ttacagaaatcatgtgac 618 ||||| || ||||||||| Sbjct: 2058 ttacaaaagtcatgtgac 2075
>dbj|AK065765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040F09, full insert sequence Length = 2572 Score = 424 bits (214), Expect = e-115 Identities = 520/618 (84%), Gaps = 3/618 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| |||| Sbjct: 596 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 655 Query: 63 cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121 || ||||| | | |||||||||||||||||||||||| |||||||||||||| || | | Sbjct: 656 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 715 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 716 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 775 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 |||||||||||||||| ||||||| ||||||||| | || || ||||| |||||||||| Sbjct: 776 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 835 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 ||||||| || |||| ||||||||||| |||||||| || ||||||| ||||||||| | Sbjct: 836 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 895 Query: 302 ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360 |||||||| | | || |||||||||| ||| | || ||||||||| ||||| | | || Sbjct: 896 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 954 Query: 361 cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420 |||||||| ||||||||||| ||||| ||||||| || || ||||| ||||||| |||| Sbjct: 955 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 1014 Query: 421 attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480 ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1015 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 1074 Query: 481 aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540 ||||| |||||| || |||||||||||||| |||||| | ||| |||| | |||| Sbjct: 1075 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 1134 Query: 541 atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600 ||| ||||| ||| |||| | || |||||| ||| ||||| |||||| ||| ||||| Sbjct: 1135 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 1194 Query: 601 ttacagaaatcatgtgac 618 ||||| || ||||||||| Sbjct: 1195 ttacaaaagtcatgtgac 1212
>gb|AY107078.1| Zea mays PCO126628 mRNA sequence Length = 1793 Score = 404 bits (204), Expect = e-109 Identities = 514/616 (83%), Gaps = 1/616 (0%) Strand = Plus / Plus Query: 3 tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62 ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| Sbjct: 297 tgctgaaactcaaaggaactctaatgcttgctaatgctgatgaagttgctgcaatccaag 356 Query: 63 cattgagagtaga-agctctgagaaaaataagatgaccagagaccataatggtttccgca 121 |||||||| || | ||||||||||||||||||||||| |||||||||||||| || |||| Sbjct: 357 cattgagactaaagagctctgagaaaaataagatgacaagagaccataatggatttcgca 416 Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181 |||| ||| | ||| |||| ||||||||||||||||| ||||||| ||||||||||| | Sbjct: 417 aactccttgttgtattgacaaaggctggcaaagtgatgactctgcacactggagatggac 476 Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241 | ||||||||||||| ||| |||| || |||||||| || | || ||| | | |||||| Sbjct: 477 gcgttatctggtcaaaattgctgccatctcttcgtgcctccagatttggtggagtgcctt 536 Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301 |||| || |||||||||||||||||||| || |||||| | |||||||| || ||||| | Sbjct: 537 ctgcattaaggatataccaatggcaggtcccgcatcacagtgtgatgcgggaaaacccat 596 Query: 302 ccatacttgttgtgggaagatctggagccagctctgttgctcctggcgtcctctgtattc 361 | |||||||||| || ||| ||||||| ||| ||||||||||| ||| ||||| Sbjct: 597 ctgtacttgttgttggtagaactggagcagaatcttcagctcctggcgtattctctattc 656 Query: 362 ttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaaa 421 ||||||| ||||||||||| ||||| |||||| || | |||||||||||||| ||||| Sbjct: 657 ttgattcatattctggagaagaacttaactctatgaaacttgaccattctgttttccaaa 716 Query: 422 ttatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcca 481 ||||||| || | ||| ||||||||||| || ||||| ||| |||| ||| ||||||||| Sbjct: 717 ttatccccttaacactgaaggattcatcagagcagcgactttatctgattcttgattcca 776 Query: 482 actccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaaa 541 | ||||||||||| |||| || | |||| | || |||| ||| |||| | ||||| Sbjct: 777 attccaatgctcatttatacccgaaatctgcagacaccctcaatatatttcttcatgaaa 836 Query: 542 tgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattcat 601 ||||||| | ||||||||| || || |||||||| ||||| ||| | ||||||||||| Sbjct: 837 tgtcaaacctgtatttctactctgtagatattcaagcaaatgttattaaagggtattcat 896 Query: 602 tacagaaatcatgtga 617 |||||||||||||||| Sbjct: 897 tacagaaatcatgtga 912
>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete sequence Length = 162359 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 316 ggaagatctggagccagctctgttg 340 ||||||||||||| ||||||||||| Sbjct: 157458 ggaagatctggagacagctctgttg 157482
>ref|XM_643893.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (359.t00011) partial mRNA Length = 831 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ttcatctgaacagcgtcttca 464 ||||||||||||||||||||| Sbjct: 653 ttcatctgaacagcgtcttca 633
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtgctgaaactcaaaggaact 22 ||||||||||||||||||||| Sbjct: 160454 gtgctgaaactcaaaggaact 160474
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtgctgaaactcaaaggaact 22 ||||||||||||||||||||| Sbjct: 508476 gtgctgaaactcaaaggaact 508496
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agaccataatggtttccgca 121 |||||||||||||||||||| Sbjct: 21686 agaccataatggtttccgca 21667
>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence Length = 238980 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaactcaaaggaactctaat 27 |||||||||||||||||||| Sbjct: 214452 aaactcaaaggaactctaat 214471
>ref|XM_360905.1| Magnaporthe grisea 70-15 hypothetical protein (MG03448.4) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tgatagctctgcatactgga 174 |||||||||||||||||||| Sbjct: 468 tgatagctctgcatactgga 449
>gb|AE006651.1| Sulfolobus solfataricus P2 section 10 of 272 of the complete genome Length = 12233 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 aattcatttatgactgaaat 542 |||||||||||||||||||| Sbjct: 12185 aattcatttatgactgaaat 12166
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agaccataatggtttccgca 121 |||||||||||||||||||| Sbjct: 112845 agaccataatggtttccgca 112826
>gb|AC104096.5| Mus musculus BAC clone RP24-370O22 from chromosome 8, complete sequence Length = 160450 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aaggaactctaatgcttgct 34 |||||||||||||||||||| Sbjct: 55393 aaggaactctaatgcttgct 55412
>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence Length = 247402 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tgattccaactccaatgctc 493 |||||||||||||||||||| Sbjct: 204053 tgattccaactccaatgctc 204034
>gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, complete sequence Length = 194309 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 tgattccaactccaatgctc 493 |||||||||||||||||||| Sbjct: 180037 tgattccaactccaatgctc 180056
>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8, complete sequence Length = 130762 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 accattctgttgcccaaatt 423 |||||||||||||||||||| Sbjct: 119163 accattctgttgcccaaatt 119182
>emb|AL163542.8| Human DNA sequence from clone RP11-360I23 on chromosome 13 Contains part of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), complete sequence Length = 177037 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 ttgatattcagaaaaatgct 585 |||||||||||||||||||| Sbjct: 64304 ttgatattcagaaaaatgct 64323
>emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chromosome 1p33-34.2 Contains the 5' end of the PTCH2 gene for patched homolog 2 (Drosophila), a ribosomal protein S2 (RPS2) pseudogene, the EIF2B3 gene for eukaryotic translation initiation factor 2B subunit 3 gamma 58kDa, a chromosome 14 open reading frame 18 (C14orf18) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, a mitochondrial ribosomal protein S17 (MRPS17) pseudogene and four CpG islands, complete sequence Length = 171656 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ataagatgaccagagaccat 108 |||||||||||||||||||| Sbjct: 104903 ataagatgaccagagaccat 104884
>gb|AC013287.11| Homo sapiens chromosome 10 clone RP11-76F14, complete sequence Length = 174578 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 aaatgctatcagagggtatt 598 |||||||||||||||||||| Sbjct: 90075 aaatgctatcagagggtatt 90094
>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence Length = 160151 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 tgatattcagaaaaatgcta 586 |||||||||||||||||||| Sbjct: 148355 tgatattcagaaaaatgcta 148336
>emb|BX571880.6| Zebrafish DNA sequence from clone DKEY-29L4 in linkage group 15, complete sequence Length = 194220 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 534 gactgaaatgtcaaatcagtattt 557 ||||||||||||||||||| |||| Sbjct: 127261 gactgaaatgtcaaatcaggattt 127284
>gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosome 13, complete sequence Length = 191824 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttgctcctggcgtcctctgt 357 |||||||||||||||||||| Sbjct: 50949 ttgctcctggcgtcctctgt 50930
>dbj|AK016211.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930563N14 product:unclassifiable, full insert sequence Length = 1044 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttgctcctggcgtcctctgt 357 |||||||||||||||||||| Sbjct: 343 ttgctcctggcgtcctctgt 324
>dbj|AK015807.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930516M05 product:unclassifiable, full insert sequence Length = 606 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttgctcctggcgtcctctgt 357 |||||||||||||||||||| Sbjct: 306 ttgctcctggcgtcctctgt 287
>gb|AC079902.15| Homo sapiens X BAC RP11-352L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 91428 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 atgtcaaatcagtatttcta 560 |||||||||||||||||||| Sbjct: 86808 atgtcaaatcagtatttcta 86789
>gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome 8, complete sequence Length = 180194 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 aaggaactctaatgcttgct 34 |||||||||||||||||||| Sbjct: 146570 aaggaactctaatgcttgct 146551
>tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, RHD gene and RHCE gene Length = 315242 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tgactgaaatgtcaaatcag 552 |||||||||||||||||||| Sbjct: 55865 tgactgaaatgtcaaatcag 55846
>emb|AL031432.1|HS465N24 Human DNA sequence from clone RP3-465N24 on chromosome 1p35.1-36.13 Contains the gene for NPD014 protein (NPD014), the gene for GCIP-interacting protein p29 (P29), a novel gene and four CpG islands, complete sequence Length = 129747 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tgactgaaatgtcaaatcag 552 |||||||||||||||||||| Sbjct: 55865 tgactgaaatgtcaaatcag 55846
>emb|AL953882.5| Human DNA sequence from clone RP4-706G24 on chromosome 1, complete sequence Length = 132066 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tgactgaaatgtcaaatcag 552 |||||||||||||||||||| Sbjct: 51570 tgactgaaatgtcaaatcag 51551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,046,889 Number of Sequences: 3902068 Number of extensions: 6046889 Number of successful extensions: 169328 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 169218 Number of HSP's gapped (non-prelim): 103 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)