ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20l21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome... 424 e-115
2gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome... 424 e-115
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 424 e-115
4dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
5dbj|AK065765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
6gb|AY107078.1| Zea mays PCO126628 mRNA sequence 404 e-109
7emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chro... 42 2.2
8ref|XM_643893.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 42 2.2
9emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 2.2
10dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 2.2
11gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, comp... 40 8.8
12gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, co... 40 8.8
13ref|XM_360905.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.8
14gb|AE006651.1| Sulfolobus solfataricus P2 section 10 of 272 of t... 40 8.8
15gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosom... 40 8.8
16gb|AC104096.5| Mus musculus BAC clone RP24-370O22 from chromosom... 40 8.8
17gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosom... 40 8.8
18gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, comple... 40 8.8
19emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 i... 40 8.8
20emb|AL163542.8| Human DNA sequence from clone RP11-360I23 on chr... 40 8.8
21emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chro... 40 8.8
22gb|AC013287.11| Homo sapiens chromosome 10 clone RP11-76F14, com... 40 8.8
23gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, comple... 40 8.8
24emb|BX571880.6| Zebrafish DNA sequence from clone DKEY-29L4 in l... 40 8.8
25gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosom... 40 8.8
26dbj|AK016211.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.8
27dbj|AK015807.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 8.8
28gb|AC079902.15| Homo sapiens X BAC RP11-352L18 (Roswell Park Can... 40 8.8
29gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome... 40 8.8
30tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, R... 40 8.8
31emb|AL031432.1|HS465N24 Human DNA sequence from clone RP3-465N24... 40 8.8
32emb|AL953882.5| Human DNA sequence from clone RP4-706G24 on chro... 40 8.8

>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06,
              complete sequence
          Length = 134001

 Score =  424 bits (214), Expect = e-115
 Identities = 520/618 (84%), Gaps = 3/618 (0%)
 Strand = Plus / Plus

                                                                          
Query: 3      tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
              ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 109393 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 109452

                                                                          
Query: 63     cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121
              || ||||| | | |||||||||||||||||||||||| |||||||||||||| ||  | |
Sbjct: 109453 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 109512

                                                                          
Query: 122    aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
              |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 109513 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 109572

                                                                          
Query: 182    gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
              |||||||||||||||| |||||||  ||||||||| | || || ||||| ||||||||||
Sbjct: 109573 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 109632

                                                                          
Query: 242    ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
              ||||||| || ||||  ||||||||||| |||||||| || ||||||| ||||||||| |
Sbjct: 109633 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 109692

                                                                          
Query: 302    ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360
              |||||||| |  | || ||||||||||| || |  || ||||||||| ||||| | | ||
Sbjct: 109693 ccatacttatcattggtagatctggagc-agatagtgctgctcctggtgtcctatctgtt 109751

                                                                          
Query: 361    cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420
              |||||||| ||||||||||| ||||| ||||||| ||  || ||||| ||||||| ||||
Sbjct: 109752 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 109811

                                                                          
Query: 421    attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480
              ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| 
Sbjct: 109812 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 109871

                                                                          
Query: 481    aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540
               |||||  |||||| || |||||||||||||| |||||| | |||  |||| |   ||||
Sbjct: 109872 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 109931

                                                                          
Query: 541    atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600
              ||| |||||   ||| ||||  | || |||||| ||| ||||| |||||| ||| |||||
Sbjct: 109932 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 109991

                                
Query: 601    ttacagaaatcatgtgac 618
              ||||| || |||||||||
Sbjct: 109992 ttacaaaagtcatgtgac 110009



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>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0042F15, complete sequence
          Length = 162959

 Score =  424 bits (214), Expect = e-115
 Identities = 520/618 (84%), Gaps = 3/618 (0%)
 Strand = Plus / Plus

                                                                         
Query: 3     tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
             ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 16582 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 16641

                                                                         
Query: 63    cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121
             || ||||| | | |||||||||||||||||||||||| |||||||||||||| ||  | |
Sbjct: 16642 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 16701

                                                                         
Query: 122   aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
             |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 16702 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 16761

                                                                         
Query: 182   gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
             |||||||||||||||| |||||||  ||||||||| | || || ||||| ||||||||||
Sbjct: 16762 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 16821

                                                                         
Query: 242   ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
             ||||||| || ||||  ||||||||||| |||||||| || ||||||| ||||||||| |
Sbjct: 16822 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 16881

                                                                         
Query: 302   ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360
             |||||||| |  | || |||||||||| ||| |  || ||||||||| ||||| | | ||
Sbjct: 16882 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 16940

                                                                         
Query: 361   cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420
             |||||||| ||||||||||| ||||| ||||||| ||  || ||||| ||||||| ||||
Sbjct: 16941 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 17000

                                                                         
Query: 421   attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480
             ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| 
Sbjct: 17001 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 17060

                                                                         
Query: 481   aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540
              |||||  |||||| || |||||||||||||| |||||| | |||  |||| |   ||||
Sbjct: 17061 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 17120

                                                                         
Query: 541   atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600
             ||| |||||   ||| ||||  | || |||||| ||| ||||| |||||| ||| |||||
Sbjct: 17121 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 17180

                               
Query: 601   ttacagaaatcatgtgac 618
             ||||| || |||||||||
Sbjct: 17181 ttacaaaagtcatgtgac 17198



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  424 bits (214), Expect = e-115
 Identities = 520/618 (84%), Gaps = 3/618 (0%)
 Strand = Plus / Plus

                                                                           
Query: 3       tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
               ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 7831807 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 7831866

                                                                           
Query: 63      cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121
               || ||||| | | |||||||||||||||||||||||| |||||||||||||| ||  | |
Sbjct: 7831867 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 7831926

                                                                           
Query: 122     aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
               |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 7831927 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 7831986

                                                                           
Query: 182     gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
               |||||||||||||||| |||||||  ||||||||| | || || ||||| ||||||||||
Sbjct: 7831987 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 7832046

                                                                           
Query: 242     ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
               ||||||| || ||||  ||||||||||| |||||||| || ||||||| ||||||||| |
Sbjct: 7832047 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 7832106

                                                                           
Query: 302     ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360
               |||||||| |  | || |||||||||| ||| |  || ||||||||| ||||| | | ||
Sbjct: 7832107 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 7832165

                                                                           
Query: 361     cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420
               |||||||| ||||||||||| ||||| ||||||| ||  || ||||| ||||||| ||||
Sbjct: 7832166 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 7832225

                                                                           
Query: 421     attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480
               ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| 
Sbjct: 7832226 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 7832285

                                                                           
Query: 481     aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540
                |||||  |||||| || |||||||||||||| |||||| | |||  |||| |   ||||
Sbjct: 7832286 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 7832345

                                                                           
Query: 541     atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600
               ||| |||||   ||| ||||  | || |||||| ||| ||||| |||||| ||| |||||
Sbjct: 7832346 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 7832405

                                 
Query: 601     ttacagaaatcatgtgac 618
               ||||| || |||||||||
Sbjct: 7832406 ttacaaaagtcatgtgac 7832423



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>dbj|AK070398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G06, full
            insert sequence
          Length = 3440

 Score =  424 bits (214), Expect = e-115
 Identities = 520/618 (84%), Gaps = 3/618 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
            ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 1459 tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 1518

                                                                        
Query: 63   cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121
            || ||||| | | |||||||||||||||||||||||| |||||||||||||| ||  | |
Sbjct: 1519 caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 1578

                                                                        
Query: 122  aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
            |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 1579 aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 1638

                                                                        
Query: 182  gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
            |||||||||||||||| |||||||  ||||||||| | || || ||||| ||||||||||
Sbjct: 1639 gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 1698

                                                                        
Query: 242  ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
            ||||||| || ||||  ||||||||||| |||||||| || ||||||| ||||||||| |
Sbjct: 1699 ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 1758

                                                                        
Query: 302  ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360
            |||||||| |  | || |||||||||| ||| |  || ||||||||| ||||| | | ||
Sbjct: 1759 ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 1817

                                                                        
Query: 361  cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420
            |||||||| ||||||||||| ||||| ||||||| ||  || ||||| ||||||| ||||
Sbjct: 1818 cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 1877

                                                                        
Query: 421  attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480
            ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| 
Sbjct: 1878 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 1937

                                                                        
Query: 481  aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540
             |||||  |||||| || |||||||||||||| |||||| | |||  |||| |   ||||
Sbjct: 1938 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 1997

                                                                        
Query: 541  atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600
            ||| |||||   ||| ||||  | || |||||| ||| ||||| |||||| ||| |||||
Sbjct: 1998 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 2057

                              
Query: 601  ttacagaaatcatgtgac 618
            ||||| || |||||||||
Sbjct: 2058 ttacaaaagtcatgtgac 2075



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>dbj|AK065765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040F09, full
            insert sequence
          Length = 2572

 Score =  424 bits (214), Expect = e-115
 Identities = 520/618 (84%), Gaps = 3/618 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
            ||||||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||
Sbjct: 596  tgctgaaactcaagggaactctaatgcttgccaatgctgatgaacttgctgcaattcaag 655

                                                                        
Query: 63   cattgagagt-agaagctctgagaaaaataagatgaccagagaccataatggtttccgca 121
            || ||||| | | |||||||||||||||||||||||| |||||||||||||| ||  | |
Sbjct: 656  caatgagactgaaaagctctgagaaaaataagatgacaagagaccataatggatttagga 715

                                                                        
Query: 122  aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
            |||||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||||||| |
Sbjct: 716  aacttcttattgtattgacaaaggctggaaaagtgatagccctgcacactggagatggac 775

                                                                        
Query: 182  gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
            |||||||||||||||| |||||||  ||||||||| | || || ||||| ||||||||||
Sbjct: 776  gtattatctggtcaaacttgttgcagtcccttcgttcctccaagtctggtgaaatgcctt 835

                                                                        
Query: 242  ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
            ||||||| || ||||  ||||||||||| |||||||| || ||||||| ||||||||| |
Sbjct: 836  ctgccttaagaatatgtcaatggcaggttccccatcatcgtgtgatgcatgagaacccat 895

                                                                        
Query: 302  ccatacttgttgtgggaagatctggagccagct-ctgttgctcctggcgtcctctgtatt 360
            |||||||| |  | || |||||||||| ||| |  || ||||||||| ||||| | | ||
Sbjct: 896  ccatacttatcattggtagatctggag-cagatagtgctgctcctggtgtcctatctgtt 954

                                                                        
Query: 361  cttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaa 420
            |||||||| ||||||||||| ||||| ||||||| ||  || ||||| ||||||| ||||
Sbjct: 955  cttgattcatattctggagaagaacttaactctctgaagttagaccactctgttgtccaa 1014

                                                                        
Query: 421  attatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcc 480
            ||||||||||||| | | ||||||||||||||||| || ||||| |||||||||||||| 
Sbjct: 1015 attatcccattgacagtgaaggattcatctgaacatcggcttcaacttattgttgattct 1074

                                                                        
Query: 481  aactccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaa 540
             |||||  |||||| || |||||||||||||| |||||| | |||  |||| |   ||||
Sbjct: 1075 cactcccgtgctcatctctatccaagatctccagatgccatgaatgtatttcttcatgaa 1134

                                                                        
Query: 541  atgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattca 600
            ||| |||||   ||| ||||  | || |||||| ||| ||||| |||||| ||| |||||
Sbjct: 1135 atgccaaatacatatctctacactgtagatattgagacaaatgttatcagggggcattca 1194

                              
Query: 601  ttacagaaatcatgtgac 618
            ||||| || |||||||||
Sbjct: 1195 ttacaaaagtcatgtgac 1212



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>gb|AY107078.1| Zea mays PCO126628 mRNA sequence
          Length = 1793

 Score =  404 bits (204), Expect = e-109
 Identities = 514/616 (83%), Gaps = 1/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgctgaaactcaaaggaactctaatgcttgctagtgttgatgaacttgctgcaatccaag 62
           ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 297 tgctgaaactcaaaggaactctaatgcttgctaatgctgatgaagttgctgcaatccaag 356

                                                                       
Query: 63  cattgagagtaga-agctctgagaaaaataagatgaccagagaccataatggtttccgca 121
           |||||||| || | ||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct: 357 cattgagactaaagagctctgagaaaaataagatgacaagagaccataatggatttcgca 416

                                                                       
Query: 122 aacttcttatcgtactgaccaaggctggcaaagtgatagctctgcatactggagatggcc 181
           |||| ||| | ||| |||| |||||||||||||||||  ||||||| ||||||||||| |
Sbjct: 417 aactccttgttgtattgacaaaggctggcaaagtgatgactctgcacactggagatggac 476

                                                                       
Query: 182 gtattatctggtcaaatttgttgccttcccttcgtgcttctaaatctggcgaaatgcctt 241
           |  ||||||||||||| ||| |||| || |||||||| || | || ||| | | ||||||
Sbjct: 477 gcgttatctggtcaaaattgctgccatctcttcgtgcctccagatttggtggagtgcctt 536

                                                                       
Query: 242 ctgccttgaggatataccaatggcaggtaccccatcaccgcgtgatgcgtgagaacccgt 301
           |||| || |||||||||||||||||||| || |||||| | |||||||| || ||||| |
Sbjct: 537 ctgcattaaggatataccaatggcaggtcccgcatcacagtgtgatgcgggaaaacccat 596

                                                                       
Query: 302 ccatacttgttgtgggaagatctggagccagctctgttgctcctggcgtcctctgtattc 361
           |  |||||||||| || ||| |||||||    |||   |||||||||||  ||| |||||
Sbjct: 597 ctgtacttgttgttggtagaactggagcagaatcttcagctcctggcgtattctctattc 656

                                                                       
Query: 362 ttgattcgtattctggagaggaactcaactctcagagatttgaccattctgttgcccaaa 421
           ||||||| ||||||||||| ||||| ||||||  || | ||||||||||||||  |||||
Sbjct: 657 ttgattcatattctggagaagaacttaactctatgaaacttgaccattctgttttccaaa 716

                                                                       
Query: 422 ttatcccattgatacttaaggattcatctgaacagcgtcttcatcttattgttgattcca 481
           ||||||| || | ||| ||||||||||| || ||||| ||| |||| ||| |||||||||
Sbjct: 717 ttatccccttaacactgaaggattcatcagagcagcgactttatctgattcttgattcca 776

                                                                       
Query: 482 actccaatgctcacctatatccaagatctccggatgcccttaattcatttatgactgaaa 541
           | |||||||||||  |||| || | |||| | ||  |||| |||  |||| |   |||||
Sbjct: 777 attccaatgctcatttatacccgaaatctgcagacaccctcaatatatttcttcatgaaa 836

                                                                       
Query: 542 tgtcaaatcagtatttctattccgttgatattcagaaaaatgctatcagagggtattcat 601
           ||||||| | ||||||||| || || ||||||||   ||||| ||| | |||||||||||
Sbjct: 837 tgtcaaacctgtatttctactctgtagatattcaagcaaatgttattaaagggtattcat 896

                           
Query: 602 tacagaaatcatgtga 617
           ||||||||||||||||
Sbjct: 897 tacagaaatcatgtga 912



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>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete
              sequence
          Length = 162359

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 316    ggaagatctggagccagctctgttg 340
              ||||||||||||| |||||||||||
Sbjct: 157458 ggaagatctggagacagctctgttg 157482



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>ref|XM_643893.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (359.t00011)
           partial mRNA
          Length = 831

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 444 ttcatctgaacagcgtcttca 464
           |||||||||||||||||||||
Sbjct: 653 ttcatctgaacagcgtcttca 633



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>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 2/10
          Length = 349887

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      gtgctgaaactcaaaggaact 22
              |||||||||||||||||||||
Sbjct: 160454 gtgctgaaactcaaaggaact 160474



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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      gtgctgaaactcaaaggaact 22
              |||||||||||||||||||||
Sbjct: 508476 gtgctgaaactcaaaggaact 508496



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>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence
          Length = 183264

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agaccataatggtttccgca 121
             ||||||||||||||||||||
Sbjct: 21686 agaccataatggtttccgca 21667



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>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence
          Length = 238980

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaactcaaaggaactctaat 27
              ||||||||||||||||||||
Sbjct: 214452 aaactcaaaggaactctaat 214471



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>ref|XM_360905.1| Magnaporthe grisea 70-15 hypothetical protein (MG03448.4) partial
           mRNA
          Length = 1383

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 tgatagctctgcatactgga 174
           ||||||||||||||||||||
Sbjct: 468 tgatagctctgcatactgga 449



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>gb|AE006651.1| Sulfolobus solfataricus P2 section 10 of 272 of the complete genome
          Length = 12233

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   aattcatttatgactgaaat 542
             ||||||||||||||||||||
Sbjct: 12185 aattcatttatgactgaaat 12166



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>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence
          Length = 173460

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    agaccataatggtttccgca 121
              ||||||||||||||||||||
Sbjct: 112845 agaccataatggtttccgca 112826



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>gb|AC104096.5| Mus musculus BAC clone RP24-370O22 from chromosome 8, complete sequence
          Length = 160450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaggaactctaatgcttgct 34
             ||||||||||||||||||||
Sbjct: 55393 aaggaactctaatgcttgct 55412



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>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence
          Length = 247402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    tgattccaactccaatgctc 493
              ||||||||||||||||||||
Sbjct: 204053 tgattccaactccaatgctc 204034



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>gb|AC125213.3| Mus musculus BAC clone RP23-136A14 from 7, complete sequence
          Length = 194309

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    tgattccaactccaatgctc 493
              ||||||||||||||||||||
Sbjct: 180037 tgattccaactccaatgctc 180056



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>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8,
              complete sequence
          Length = 130762

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    accattctgttgcccaaatt 423
              ||||||||||||||||||||
Sbjct: 119163 accattctgttgcccaaatt 119182



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>emb|AL163542.8| Human DNA sequence from clone RP11-360I23 on chromosome 13 Contains
             part of the DACH gene for dachshund homolog (Drosophila)
             (DACH1 FLJ10138), complete sequence
          Length = 177037

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   ttgatattcagaaaaatgct 585
             ||||||||||||||||||||
Sbjct: 64304 ttgatattcagaaaaatgct 64323



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>emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chromosome 1p33-34.2 Contains
              the 5' end of the PTCH2 gene for patched homolog 2
              (Drosophila), a ribosomal protein S2 (RPS2) pseudogene, the
              EIF2B3 gene for eukaryotic translation initiation factor 2B
              subunit 3 gamma 58kDa, a chromosome 14 open reading frame
              18 (C14orf18) pseudogene, a peptidylprolyl isomerase A
              (cyclophilin A) (PPIA) pseudogene, a mitochondrial
              ribosomal protein S17 (MRPS17) pseudogene and four CpG
              islands, complete sequence
          Length = 171656

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ataagatgaccagagaccat 108
              ||||||||||||||||||||
Sbjct: 104903 ataagatgaccagagaccat 104884



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>gb|AC013287.11| Homo sapiens chromosome 10 clone RP11-76F14, complete sequence
          Length = 174578

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 579   aaatgctatcagagggtatt 598
             ||||||||||||||||||||
Sbjct: 90075 aaatgctatcagagggtatt 90094



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>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence
          Length = 160151

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    tgatattcagaaaaatgcta 586
              ||||||||||||||||||||
Sbjct: 148355 tgatattcagaaaaatgcta 148336



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>emb|BX571880.6| Zebrafish DNA sequence from clone DKEY-29L4 in linkage group 15, complete
              sequence
          Length = 194220

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 534    gactgaaatgtcaaatcagtattt 557
              ||||||||||||||||||| ||||
Sbjct: 127261 gactgaaatgtcaaatcaggattt 127284



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>gb|AC159207.2| Mus musculus BAC clone RP23-150H14 from chromosome 13, complete
             sequence
          Length = 191824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ttgctcctggcgtcctctgt 357
             ||||||||||||||||||||
Sbjct: 50949 ttgctcctggcgtcctctgt 50930



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>dbj|AK016211.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930563N14 product:unclassifiable, full
           insert sequence
          Length = 1044

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 ttgctcctggcgtcctctgt 357
           ||||||||||||||||||||
Sbjct: 343 ttgctcctggcgtcctctgt 324



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>dbj|AK015807.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930516M05 product:unclassifiable, full
           insert sequence
          Length = 606

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 ttgctcctggcgtcctctgt 357
           ||||||||||||||||||||
Sbjct: 306 ttgctcctggcgtcctctgt 287



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>gb|AC079902.15| Homo sapiens X BAC RP11-352L18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91428

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   atgtcaaatcagtatttcta 560
             ||||||||||||||||||||
Sbjct: 86808 atgtcaaatcagtatttcta 86789



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>gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome 8, complete sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     aaggaactctaatgcttgct 34
              ||||||||||||||||||||
Sbjct: 146570 aaggaactctaatgcttgct 146551



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>tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, RHD gene and RHCE gene
          Length = 315242

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   tgactgaaatgtcaaatcag 552
             ||||||||||||||||||||
Sbjct: 55865 tgactgaaatgtcaaatcag 55846



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>emb|AL031432.1|HS465N24 Human DNA sequence from clone RP3-465N24 on chromosome 1p35.1-36.13
             Contains the gene for NPD014 protein (NPD014), the gene
             for GCIP-interacting protein p29 (P29), a novel gene and
             four CpG islands, complete sequence
          Length = 129747

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   tgactgaaatgtcaaatcag 552
             ||||||||||||||||||||
Sbjct: 55865 tgactgaaatgtcaaatcag 55846



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>emb|AL953882.5| Human DNA sequence from clone RP4-706G24 on chromosome 1, complete
             sequence
          Length = 132066

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   tgactgaaatgtcaaatcag 552
             ||||||||||||||||||||
Sbjct: 51570 tgactgaaatgtcaaatcag 51551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,046,889
Number of Sequences: 3902068
Number of extensions: 6046889
Number of successful extensions: 169328
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 169218
Number of HSP's gapped (non-prelim): 103
length of query: 644
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 621
effective length of database: 17,143,297,704
effective search space: 10645987874184
effective search space used: 10645987874184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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