| Clone Name | baal21a17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 8e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1 cacttccaaggcgcggacctcgaactgccgcgccggaactacgtcctggacgacccgagg 60 |||||||| ||||| |||||||| |||||||| ||||||||||||||| || | || Sbjct: 16924030 cacttccagggcgccgacctcgacctgccgcgggagaactacgtcctggaggatcaccgg 16924089 Query: 61 agggggagcttgtgcatcctcctggccgactccgg 95 |||||| | ||||| ||||||| | ||||||||| Sbjct: 16924090 agggggcacctgtgcgtcctcctcggcgactccgg 16924124
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 54.0 bits (27), Expect = 8e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1 cacttccaaggcgcggacctcgaactgccgcgccggaactacgtcctggacgacccgagg 60 |||||||| ||||| |||||||| |||||||| ||||||||||||||| || | || Sbjct: 53843 cacttccagggcgccgacctcgacctgccgcgggagaactacgtcctggaggatcaccgg 53902 Query: 61 agggggagcttgtgcatcctcctggccgactccgg 95 |||||| | ||||| ||||||| | ||||||||| Sbjct: 53903 agggggcacctgtgcgtcctcctcggcgactccgg 53937
>dbj|AK105952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D02, full insert sequence Length = 1449 Score = 54.0 bits (27), Expect = 8e-05 Identities = 78/95 (82%) Strand = Plus / Plus Query: 1 cacttccaaggcgcggacctcgaactgccgcgccggaactacgtcctggacgacccgagg 60 |||||||| ||||| |||||||| |||||||| ||||||||||||||| || | || Sbjct: 1200 cacttccagggcgccgacctcgacctgccgcgggagaactacgtcctggaggatcaccgg 1259 Query: 61 agggggagcttgtgcatcctcctggccgactccgg 95 |||||| | ||||| ||||||| | ||||||||| Sbjct: 1260 agggggcacctgtgcgtcctcctcggcgactccgg 1294
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.079 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ggcgcggacctcgaactgccgcgccg 35 ||||||| |||||||||||||||||| Sbjct: 4843242 ggcgcggccctcgaactgccgcgccg 4843217
>ref|XM_363676.1| Magnaporthe grisea 70-15 hypothetical protein (MG01602.4) partial mRNA Length = 4314 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 catcctcctggccgactcc 93 ||||||||||||||||||| Sbjct: 4024 catcctcctggccgactcc 4006
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 38.2 bits (19), Expect = 4.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 atcctcctggccgactccg 94 ||||||||||||||||||| Sbjct: 54056 atcctcctggccgactccg 54074 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 508,279 Number of Sequences: 3902068 Number of extensions: 508279 Number of successful extensions: 36007 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 35946 Number of HSP's gapped (non-prelim): 64 length of query: 108 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 87 effective length of database: 17,151,101,840 effective search space: 1492145860080 effective search space used: 1492145860080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)