ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20l14 |
|---|---|
| Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 102 bits (255), Expect = 3e-22 Identities = 52/57 (91%), Positives = 55/57 (96%), Gaps = 1/57 (1%) Frame = +1 Query: 250 KLFQVRAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 K F+VRAS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRF Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRF 89
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 99.4 bits (246), Expect = 3e-21 Identities = 48/49 (97%), Positives = 49/49 (100%) Frame = +1 Query: 271 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRF Sbjct: 52 SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRF 100
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 97.1 bits (240), Expect = 2e-20 Identities = 46/50 (92%), Positives = 49/50 (98%) Frame = +1 Query: 268 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRF Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRF 95
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 67.8 bits (164), Expect = 1e-11 Identities = 29/40 (72%), Positives = 38/40 (95%) Frame = +1 Query: 298 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRF Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRF 42
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 57.0 bits (136), Expect = 2e-08 Identities = 23/39 (58%), Positives = 31/39 (79%) Frame = +1 Query: 301 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I ++PSILSA+FA G +++A+E G DW+HVDVMDG F Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHF 45
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 53.1 bits (126), Expect = 3e-07 Identities = 25/39 (64%), Positives = 30/39 (76%) Frame = +1 Query: 301 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I V+PSILSA+FA LG ++K VE G D IH+DVMDG F Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHF 40
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 51.2 bits (121), Expect = 1e-06 Identities = 23/37 (62%), Positives = 30/37 (81%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD F Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHF 39
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = +1 Query: 289 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD + Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHY 54
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 50.4 bits (119), Expect = 2e-06 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = +1 Query: 289 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD + Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHY 54
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 49.3 bits (116), Expect = 4e-06 Identities = 21/38 (55%), Positives = 29/38 (76%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I++PSIL+++FA LG + V AG DW+H+DVMDG F Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHF 42
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 49.3 bits (116), Expect = 4e-06 Identities = 20/48 (41%), Positives = 32/48 (66%) Frame = +1 Query: 274 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG F Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHF 49
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 48.9 bits (115), Expect = 5e-06 Identities = 21/38 (55%), Positives = 30/38 (78%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG F Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHF 44
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 48.9 bits (115), Expect = 5e-06 Identities = 21/38 (55%), Positives = 30/38 (78%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG F Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHF 44
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/37 (59%), Positives = 28/37 (75%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++PSILSA+FA+LGE +K V AG D IH DVMD + Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHY 42
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/38 (55%), Positives = 30/38 (78%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG F Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHF 39
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 47.0 bits (110), Expect = 2e-05 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +1 Query: 292 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG F Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHF 45
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 46.6 bits (109), Expect = 2e-05 Identities = 19/38 (50%), Positives = 29/38 (76%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I++PSIL+++FA LG + V +G +W+H+DVMDG F Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHF 42
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 46.2 bits (108), Expect = 3e-05 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++ SILSA+FA+LGE K AG DWIH DVMD + Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHY 42
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 45.8 bits (107), Expect = 4e-05 Identities = 18/42 (42%), Positives = 30/42 (71%) Frame = +1 Query: 292 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG F Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHF 44
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 45.4 bits (106), Expect = 5e-05 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = +1 Query: 301 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I + SILSA+F L E++K E AG D+ HVD+MDG F Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHF 40
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+FA+LGE AG D +H DVMD + Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHY 42
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+FA+LGE AG D +H DVMD + Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHY 42
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+FA+LGE AG D +H DVMD + Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHY 42
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/38 (50%), Positives = 26/38 (68%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+FA+LGE AG D +H DVMD + Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHY 42
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+FA+LGE V AG D +H DVMD + Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHY 42
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/38 (52%), Positives = 28/38 (73%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSILSA+ A+LG+ V+ V AG D IH DVMD + Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHY 42
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/38 (50%), Positives = 27/38 (71%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I++PSIL+++FA L V AG +W+H+DVMDG F Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHF 42
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 43.1 bits (100), Expect = 3e-04 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++PS+LS++FA L + + G DW+H+D+MDG F Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHF 45
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 42.7 bits (99), Expect = 3e-04 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++PS+LSA+F+ L + +E G W+H+DVMDG F Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHF 43
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 42.4 bits (98), Expect = 5e-04 Identities = 19/38 (50%), Positives = 27/38 (71%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++S S+LSANF++LGE + V +G D IH DVMD + Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHY 42
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 42.0 bits (97), Expect = 6e-04 Identities = 17/37 (45%), Positives = 27/37 (72%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 ++PS+L+ +FA L ++V + G DW+HVDVMD +F Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQF 42
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/38 (44%), Positives = 27/38 (71%) Frame = +1 Query: 304 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +++PSIL+ ++ +GEQ++A G D +H DVMDG F Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHF 40
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 39.3 bits (90), Expect = 0.004 Identities = 18/37 (48%), Positives = 29/37 (78%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 V+PS+LSA+F L +++++V A D++HVDVMDG + Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHY 37
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 39.3 bits (90), Expect = 0.004 Identities = 18/37 (48%), Positives = 29/37 (78%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 V+PS+LSA+F L +++++V A D++HVDVMDG + Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHY 37
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 39.3 bits (90), Expect = 0.004 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 + PSIL+++ A LG + + +G D++H+DVMDG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHF 43
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 39.3 bits (90), Expect = 0.004 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 + PSIL+++ A LG + + +G D++H+DVMDG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHF 43
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 39.3 bits (90), Expect = 0.004 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 + PSIL+++ A LG + + +G D++H+DVMDG F Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHF 43
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 34.7 bits (78), Expect = 0.094 Identities = 13/37 (35%), Positives = 25/37 (67%) Frame = +1 Query: 307 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 +SPS++ + K EQ++ ++ + D+ H+D+MDG F Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHF 38
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 268 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 405 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 268 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 405 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 301 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 I ++PS+LSA+FA + + G D +H DVMD + Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHY 43
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 316 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRF 417 SIL NF L E++ ++ G IH+DVMD F Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTF 46
>GLI4_XENLA (Q91661) Zinc finger protein GLI4 (Neural-specific DNA-binding| protein xGLI4) (xGLI-4) Length = 1361 Score = 29.3 bits (64), Expect = 3.9 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = +3 Query: 3 RGRVAPHPPNRPSASIPFHSP 65 R APHPPNRP P H P Sbjct: 1173 RPPAAPHPPNRPRNIHPVHHP 1193
>HIS4_RHOS4 (P50936) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 239 Score = 29.3 bits (64), Expect = 3.9 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 Query: 352 QVKAVEVAGCDWIHVDVMDGRF 417 Q A E AGC+W+H+ ++G F Sbjct: 35 QAAAFEAAGCEWVHLVDLNGAF 56
>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +1 Query: 349 EQVKAVEVAGCDWIHVDVMDGRF 417 +Q A +AGC WIHV ++G F Sbjct: 34 DQAAAFALAGCRWIHVVDLNGAF 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,752,821 Number of Sequences: 219361 Number of extensions: 717670 Number of successful extensions: 2443 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 2379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2436 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
