| Clone Name | baal21a05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY781348.1| Triticum aestivum USP family protein mRNA, complete cds Length = 902 Score = 811 bits (409), Expect = 0.0 Identities = 529/566 (93%), Gaps = 6/566 (1%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 204 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gctcctcctgcacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 264 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcacccttcggtcgcaaagaa 181 ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 265 ggcctccggctcgcctttgatccccctctcggagttctctcacccttcaactgcaaagaa 324 Query: 182 atatggggtgaagcctgatgctgaaacactggacatgctcaacaccatagctaagcagaa 241 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 325 atatggggtgaagcctgatgctgaaacgctggacatgctcaacactatagctaagcagaa 384 Query: 242 ggaggttgccgtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagc 301 |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 385 ggaggtctccgtggtttcaaaagtcctgtttggagatccccgcgagaagctgtgccaagc 444 Query: 302 catccatgacatgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaa 361 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 445 catccatgacatgcccatcagctccctggtcattgggagcaggggccttggcaagctcaa 504 Query: 362 gagggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcac 421 |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 505 gagggtgctcttgggcagcgtcagcgattacgtcgtgaacaatgccgcctgccctgtcac 564 Query: 422 cgttgtcaagccagcgagcacccatgcctgatctcgtcatcgaaaatatcctcatctggt 481 |||||||||||||||||| | |||||||||||||| |||||| |||| ||| ||| || | Sbjct: 565 cgttgtcaagccagcgagtaaccatgcctgatctcatcatcgcaaatgtccacatgtgtt 624 Query: 482 ttagtttg-ttgagtcctatatatccagtcatggctgcaacttattgaaccatgcagtgt 540 |||||||| |||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct: 625 ttagtttgccagagtcctatatatccagt--tggccgcaacttattgaaccatccag--- 679 Query: 541 tgttgtttgtaataatgattgacaat 566 |||| ||||||||||| ||||||||| Sbjct: 680 tgttatttgtaataataattgacaat 705
>ref|XM_475607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 504 Score = 426 bits (215), Expect = e-116 Identities = 380/435 (87%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 60 ggggagccgcgcggcgctgcggtgggcggcggacaacctgctccgcgccggcgaccacct 119 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 catcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 179 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcacccttcggtcgcaaagaa 181 |||| ||||||| || ||||| ||||||||||| |||||| | ||| | | |||||||| Sbjct: 180 ggccaccggctccccattgattcccctctcggatttctctgaacctacaattgcaaagaa 239 Query: 182 atatggggtgaagcctgatgctgaaacactggacatgctcaacaccatagctaagcagaa 241 |||||| | ||||||||||| |||||| |||||||||| || || | || | |||||| Sbjct: 240 atatggagcaaagcctgatgccgaaacattggacatgcttaatactgtggccaggcagaa 299 Query: 242 ggaggttgccgtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagc 301 |||||||| ||||||| ||||||||| | ||||||||||| ||||||||||||||||| Sbjct: 300 ggaggttgtggtggttttcaaagtcctttggggagatccccgtgagaagctatgccaagc 359 Query: 302 catccatgacatgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaa 361 |||| | || || ||||| |||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 360 catcaacgaaatccccatgagctgcttggttattggaagcaggggtcttggcaaactcaa 419 Query: 362 gagggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcac 421 ||||||||| || || || |||||||| |||||||||||||||||| | ||||| ||||| Sbjct: 420 gagggtgctgttaggtagcgtcagcgactacgtcgtgaacaacgccacttgcccagtcac 479 Query: 422 cgttgtcaagccagc 436 ||||||||| |||| Sbjct: 480 agttgtcaagacagc 494
>dbj|AK065771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041K03, full insert sequence Length = 777 Score = 426 bits (215), Expect = e-116 Identities = 380/435 (87%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 148 ggggagccgcgcggcgctgcggtgggcggcggacaacctgctccgcgccggcgaccacct 207 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 catcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 267 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcacccttcggtcgcaaagaa 181 |||| ||||||| || ||||| ||||||||||| |||||| | ||| | | |||||||| Sbjct: 268 ggccaccggctccccattgattcccctctcggatttctctgaacctacaattgcaaagaa 327 Query: 182 atatggggtgaagcctgatgctgaaacactggacatgctcaacaccatagctaagcagaa 241 |||||| | ||||||||||| |||||| |||||||||| || || | || | |||||| Sbjct: 328 atatggagcaaagcctgatgccgaaacattggacatgcttaatactgtggccaggcagaa 387 Query: 242 ggaggttgccgtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagc 301 |||||||| ||||||| ||||||||| | ||||||||||| ||||||||||||||||| Sbjct: 388 ggaggttgtggtggttttcaaagtcctttggggagatccccgtgagaagctatgccaagc 447 Query: 302 catccatgacatgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaa 361 |||| | || || ||||| |||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 448 catcaacgaaatccccatgagctgcttggttattggaagcaggggtcttggcaaactcaa 507 Query: 362 gagggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcac 421 ||||||||| || || || |||||||| |||||||||||||||||| | ||||| ||||| Sbjct: 508 gagggtgctgttaggtagcgtcagcgactacgtcgtgaacaacgccacttgcccagtcac 567 Query: 422 cgttgtcaagccagc 436 ||||||||| |||| Sbjct: 568 agttgtcaagacagc 582
>dbj|AK103075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118C16, full insert sequence Length = 780 Score = 410 bits (207), Expect = e-111 Identities = 378/435 (86%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 148 ggggagccgcgcggcgctgcggtgggcggcggacaacctgctccgcgccggcgaccacct 207 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 catcctcctccacgtccccaaggaccccgactacgagcagggcgagaccctcctctggga 267 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcacccttcggtcgcaaagaa 181 |||| ||||||| || ||||| ||||||||||| |||||| | ||| | | |||||||| Sbjct: 268 ggccaccggctccccattgattcccctctcggatttctctgaacctacaattgcaaagaa 327 Query: 182 atatggggtgaagcctgatgctgaaacactggacatgctcaacaccatagctaagcagaa 241 |||||| | ||||||||||| |||||| |||||||||| || || | || | |||||| Sbjct: 328 atatggagcaaagcctgatgccgaaacattggacatgcttaatactgtggccaggcagaa 387 Query: 242 ggaggttgccgtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagc 301 |||||||| ||||||| ||||||||| | ||||||||||| ||||| ||||||||||| Sbjct: 388 ggaggttgtggtggttttcaaagtcctttggggagatccccgtgagaaactatgccaagc 447 Query: 302 catccatgacatgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaa 361 |||| | || || ||||| |||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 448 catcaacgaaatccccatgagctgcttggttattggaagcaggggtcttggcaaactcaa 507 Query: 362 gagggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcac 421 ||||||||| || || || |||||||| |||||||||||||||||| | ||||| ||||| Sbjct: 508 gagggtgctgttaggtagcgtcagcgactacgtcgtgaacaacgccacttgcccagtcac 567 Query: 422 cgttgtcaagccagc 436 ||||||||| |||| Sbjct: 568 agttgtcaagacagc 582
>gb|AY596596.1| Saccharum officinarum clone SCCCLR1072E04, complete sequence Length = 821 Score = 258 bits (130), Expect = 2e-65 Identities = 355/430 (82%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 ||||||||| |||||||||| ||||||||||| ||||||||| ||| |||||||| |||| Sbjct: 141 ggggagccgggcggcgctgcggtgggcggcggccaacctgctgcgcgccggcgaccacct 200 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 ||| || || |||||| ||||||| ||||||||||||||| ||||| || |||||||||| Sbjct: 201 gctgctgctgcacgtcatcaaggagcccgactacgagcagagcgaggccatcctctggga 260 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcacccttcggtcgcaaagaa 181 || ||||||| || ||||| |||||||||||||||||| ||||| |||| ||||| Sbjct: 261 atccaccggctccccgttgattcccctctcggaattctctgaccctattatcgcgaagaa 320 Query: 182 atatggggtgaagcctgatgctgaaacactggacatgctcaacaccatagctaagcagaa 241 |||||| | || || || ||||| ||||||| || ||||| | ||||| ||||| Sbjct: 321 atatggagcaaaacccgacatagaaaccttggacatcctgaacactacagctacccagaa 380 Query: 242 ggaggttgccgtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagc 301 |||| || |||||| |||||||||| |||||||| || |||||||| || |||| Sbjct: 381 ggagattatggtggttgtgaaagtcctgtggggagatccacgtgagaagctctgtcaagt 440 Query: 302 catccatgacatgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaa 361 |||||||||| || | |||||| |||| || || ||||||||||||||||||||||| Sbjct: 441 tatccatgacaccccgttgagctgcttggttataggaagcaggggccttggcaagctcaa 500 Query: 362 gagggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcac 421 ||||||||||||||| ||||||||||| || |||||||||||||| | ||||| ||||| Sbjct: 501 gagggtgctcttgggaagtgtcagcgactatgtcgtgaacaacgcaacctgccctgtcac 560 Query: 422 cgttgtcaag 431 ||| |||||| Sbjct: 561 cgtcgtcaag 570
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Minus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 3286703 ggggagccgcgcggcgctgcggtgggcggcggacaacctgctccgcgccggcgaccacct 3286644 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3286643 catcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 3286584 Query: 122 ggcctccggctc 133 |||| ||||||| Sbjct: 3286583 ggccaccggctc 3286572 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 252 gtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagccatccatgac 311 ||||||| ||||||||| | ||||||||||| ||||||||||||||||||||| | || Sbjct: 3285211 gtggttttcaaagtcctttggggagatccccgtgagaagctatgccaagccatcaacgaa 3285152 Query: 312 atgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaagagg 365 || ||||| |||||| |||| ||||| |||||||| |||||||| ||||||||| Sbjct: 3285151 atccccatgagctgcttggttattggaagcaggggtcttggcaaactcaagagg 3285098 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 363 agggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcacc 422 |||||||| || || || |||||||| |||||||||||||||||| | ||||| ||||| Sbjct: 3285004 agggtgctgttaggtagcgtcagcgactacgtcgtgaacaacgccacttgcccagtcaca 3284945 Query: 423 gttgtcaagccagc 436 ||||||||| |||| Sbjct: 3284944 gttgtcaagacagc 3284931 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 138 ttgatccccctctcggaattctctcacccttcggtcgcaaagaaatatggggtgaagcct 197 ||||| ||||||||||| |||||| | ||| | | |||||||||||||| | |||||| Sbjct: 3285407 ttgattcccctctcggatttctctgaacctacaattgcaaagaaatatggagcaaagcct 3285348 Query: 198 gatgctgaaacactggacatgct 220 ||||| |||||| |||||||||| Sbjct: 3285347 gatgccgaaacattggacatgct 3285325
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Minus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 80527 ggggagccgcgcggcgctgcggtgggcggcggacaacctgctccgcgccggcgaccacct 80468 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80467 catcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 80408 Query: 122 ggcctccggctc 133 |||| ||||||| Sbjct: 80407 ggccaccggctc 80396 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 252 gtggtttccaaagtcctgtttggagatccccgcgagaagctatgccaagccatccatgac 311 ||||||| ||||||||| | ||||||||||| ||||||||||||||||||||| | || Sbjct: 79035 gtggttttcaaagtcctttggggagatccccgtgagaagctatgccaagccatcaacgaa 78976 Query: 312 atgcccatcagctgcctggtcattgggagcaggggccttggcaagctcaagagg 365 || ||||| |||||| |||| ||||| |||||||| |||||||| ||||||||| Sbjct: 78975 atccccatgagctgcttggttattggaagcaggggtcttggcaaactcaagagg 78922 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 363 agggtgctcttgggcagtgtcagcgattacgtcgtgaacaacgccgcgtgcccggtcacc 422 |||||||| || || || |||||||| |||||||||||||||||| | ||||| ||||| Sbjct: 78828 agggtgctgttaggtagcgtcagcgactacgtcgtgaacaacgccacttgcccagtcaca 78769 Query: 423 gttgtcaagccagc 436 ||||||||| |||| Sbjct: 78768 gttgtcaagacagc 78755 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 138 ttgatccccctctcggaattctctcacccttcggtcgcaaagaaatatggggtgaagcct 197 ||||| ||||||||||| |||||| | ||| | | |||||||||||||| | |||||| Sbjct: 79231 ttgattcccctctcggatttctctgaacctacaattgcaaagaaatatggagcaaagcct 79172 Query: 198 gatgctgaaacactggacatgct 220 ||||| |||||| |||||||||| Sbjct: 79171 gatgccgaaacattggacatgct 79149
>gb|AY107821.1| Zea mays PCO148543 mRNA sequence Length = 910 Score = 155 bits (78), Expect = 2e-34 Identities = 144/166 (86%) Strand = Plus / Plus Query: 2 ggggagccgcgcggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacct 61 ||||||||| |||||||||| ||||||||||| ||||||||| || |||||||| |||| Sbjct: 222 ggggagccgggcggcgctgcggtgggcggcggccaacctgctgcgagccggcgaccacct 281 Query: 62 gctcctcctccacgtcctcaaggaccccgactacgagcagggcgagaccctcctctggga 121 ||| || || |||||| ||||||| ||||||||||||||| ||||| || |||||||||| Sbjct: 282 gctgctgctgcacgtcatcaaggagcccgactacgagcagagcgaggccatcctctggga 341 Query: 122 ggcctccggctcgcctttgatccccctctcggaattctctcaccct 167 || ||||||| || ||||| |||||||||||||||||| ||||| Sbjct: 342 atccaccggctccccgttgattcccctctcggaattctctgaccct 387 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 321 agctgcctggtcattgggagcaggggccttggcaagctcaagagggtgctcttgggcagt 380 |||||| |||| || || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 541 agctgcttggttataggaagcaggggccttggcaagctcaagagggtgctcttgggaagt 600 Query: 381 gtcagcgattacgtcgtgaacaacgccgcgtgcccggtcaccgttgtcaag 431 |||||||| || || |||||||| || | ||||| |||||||| |||||| Sbjct: 601 gtcagcgactatgttgtgaacaatgcaacctgccctgtcaccgtcgtcaag 651
>gb|BT017342.1| Zea mays clone EL01N0323A01.c mRNA sequence Length = 525 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Plus Query: 261 aaagtcctgtttggagatccccgcgagaagctatgccaagccatccatgacatgcccatc 320 |||||||||| |||||||| || |||||||| || |||| |||||||||| || | Sbjct: 159 aaagtcctgtggggagatccgcgtgagaagctctgtcaagttatccatgacaccccgttg 218 Query: 321 agctgcctggtcattgggagcaggggccttggcaagctcaagagggtgctcttgggcagt 380 |||||| |||| || || ||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 219 agctgcttggttataggaagcaggggccttggcaaactcaagagggtgctcttaggaagt 278 Query: 381 gtcagcgattacgtcgtgaacaacgccgcgtgcccggtcaccgttgtcaag 431 |||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 279 gtcagcgattacgtcgtgaacaacgcaacctgccctgtcaccgttgtcaag 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 127 ccggctcgcctttgatccccctctcggaattctctcaccct 167 ||||||| || ||||| ||||||||||| |||||| ||||| Sbjct: 25 ccggctccccgttgattcccctctcggagttctctgaccct 65
>ref|XM_463477.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 14 ggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacctgctcctcctcca 73 |||||||||||||||||| |||||||| |||||| ||||||| ||| |||||||||| Sbjct: 66 ggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcca 125 Query: 74 c 74 | Sbjct: 126 c 126
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 14 ggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacctgctcctcctcca 73 |||||||||||||||||| |||||||| |||||| ||||||| ||| |||||||||| Sbjct: 36491239 ggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcca 36491180 Query: 74 c 74 | Sbjct: 36491179 c 36491179 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccgcgcggcgctgcagtgggc 28 ||||||||||||||||||||| Sbjct: 594905 ccgcgcggcgctgcagtgggc 594925
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 14 ggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacctgctcctcctcca 73 |||||||||||||||||| |||||||| |||||| ||||||| ||| |||||||||| Sbjct: 4614 ggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcca 4555 Query: 74 c 74 | Sbjct: 4554 c 4554
>dbj|AK108159.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G10, full insert sequence Length = 799 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 14 ggcgctgcagtgggcggcggacaacctgctccgctccggcgacaacctgctcctcctcca 73 |||||||||||||||||| |||||||| |||||| ||||||| ||| |||||||||| Sbjct: 153 ggcgctgcagtgggcggccgacaacctcctccgcaagggcgacaccctcgtcctcctcca 212 Query: 74 c 74 | Sbjct: 213 c 213
>ref|NM_183532.1| Oryza sativa (japonica cultivar-group), mRNA Length = 552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccgcgcggcgctgcagtgggc 28 ||||||||||||||||||||| Sbjct: 48 ccgcgcggcgctgcagtgggc 68
>gb|BT019453.1| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|BT019452.1| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AE009171.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 197 of 256 of the complete sequence Length = 11237 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 456 cgtcatcgaaaatatcctcatctgg 480 ||||||||| ||||||||||||||| Sbjct: 4483 cgtcatcgacaatatcctcatctgg 4507
>gb|BC017314.2| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian), mRNA (cDNA clone MGC:29755 IMAGE:3946751), complete cds Length = 2154 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 777 acactgggcatgctcaataccatagctaa 749
>emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chromosome 6, complete sequence Length = 60406 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 agtttgttgagtcctatatat 504 ||||||||||||||||||||| Sbjct: 4253 agtttgttgagtcctatatat 4273
>emb|BX640634.1|HSM806680 Homo sapiens mRNA; cDNA DKFZp686D0662 (from clone DKFZp686D0662); complete cds Length = 5182 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 724 acactgggcatgctcaataccatagctaa 696
>ref|NM_005238.2| Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) (ETS1), mRNA Length = 5228 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 779 acactgggcatgctcaataccatagctaa 751
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 456 cgtcatcgaaaatatcctcatctgg 480 ||||||||| ||||||||||||||| Sbjct: 2184155 cgtcatcgacaatatcctcatctgg 2184179
>emb|CR542254.1| Homo sapiens full open reading frame cDNA clone RZPDo834B0726D for gene ETS1, v-ets erythroblastosis virus E26 oncogene homolog 1 (avian); complete cds, incl. stopcodon Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cgcgcggcgctgcagtgggcg 29 ||||||||||||||||||||| Sbjct: 17823333 cgcgcggcgctgcagtgggcg 17823313
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccgcgcggcgctgcagtgggc 28 ||||||||||||||||||||| Sbjct: 69510 ccgcgcggcgctgcagtgggc 69530
>gb|AY890388.1| Synthetic construct Homo sapiens clone FLH018852.01X v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AY888523.1| Synthetic construct Homo sapiens clone FLH008825.01X v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AY888522.1| Synthetic construct Homo sapiens clone FLH008824.01X v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>dbj|AK120590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145N02, full insert sequence Length = 1700 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cgcgcggcgctgcagtgggcg 29 ||||||||||||||||||||| Sbjct: 250 cgcgcggcgctgcagtgggcg 270
>gb|AY893897.1| Synthetic construct Homo sapiens clone FLH127901.01L v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, partial cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AY893450.1| Synthetic construct Homo sapiens clone FLH127819.01X v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AY893377.1| Synthetic construct Homo sapiens clone FLH131104.01X v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|AY892857.1| Synthetic construct Homo sapiens clone FLH018848.01L v-ets erythroblastosis virus E26 oncogene-like 1 (ETS1) mRNA, partial cds Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 507 acactgggcatgctcaataccatagctaa 479
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 ctgctcctcctccacgtcctc 80 ||||||||||||||||||||| Sbjct: 3422778 ctgctcctcctccacgtcctc 3422798
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cgcgcggcgctgcagtgggcg 29 ||||||||||||||||||||| Sbjct: 17749652 cgcgcggcgctgcagtgggcg 17749632
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cgcgcggcgctgcagtgggcg 29 ||||||||||||||||||||| Sbjct: 42531 cgcgcggcgctgcagtgggcg 42511
>gb|J04101.1|HUMETS1A Human erythroblastosis virus oncogene homolog 1 (ets-1) mRNA, complete cds Length = 1450 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 626 acactgggcatgctcaataccatagctaa 598
>emb|X14798.1|HSCETS1 Human DNA for c-ets-1 proto-oncogene Length = 1604 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 207 acactggacatgctcaacaccatagctaa 235 ||||||| ||||||||| ||||||||||| Sbjct: 785 acactgggcatgctcaataccatagctaa 757
>gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 140214 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gtttgttgagtcctatatat 504 |||||||||||||||||||| Sbjct: 9186 gtttgttgagtcctatatat 9205
>gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-97e5, complete sequence Length = 132467 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tgggcagtgtcagcgattacgtcgtgaa 400 |||||||||||||| ||||||| ||||| Sbjct: 108530 tgggcagtgtcagcaattacgtagtgaa 108557
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aggaccccgactacgagcag 101 |||||||||||||||||||| Sbjct: 1672853 aggaccccgactacgagcag 1672834
>gb|AC149542.1| Populus trichocarpa clone Pop1-2C5, complete sequence Length = 146274 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 177 aagaaatatggggtgaagcctgatgctgaaac 208 |||||||| ||| ||||||||||| ||||||| Sbjct: 39922 aagaaatacgggttgaagcctgatcctgaaac 39891
>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence Length = 182355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gtttgttgagtcctatatat 504 |||||||||||||||||||| Sbjct: 120660 gtttgttgagtcctatatat 120679
>gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 8 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 gtcatcgaaaatatcctcat 476 |||||||||||||||||||| Sbjct: 56926 gtcatcgaaaatatcctcat 56907
>gb|AC144539.7| Medicago truncatula clone mth2-11o10, complete sequence Length = 113167 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 tgggcagtgtcagcgattacgtcgtgaa 400 |||||||||||||| ||||||| ||||| Sbjct: 7745 tgggcagtgtcagcaattacgtagtgaa 7772
>emb|AL356461.15| Human DNA sequence from clone RP11-180D15 on chromosome Xq13.2-21.2 Contains a purinergic receptor P2Y G-protein coupled 10 (P2RY10) pseudogene, complete sequence Length = 127615 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caagccatccatgacatgcc 316 |||||||||||||||||||| Sbjct: 9826 caagccatccatgacatgcc 9807
>gb|AF244737.1| Solanum physalifolium internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 598 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gggggagccgcgcggcgctg 20 |||||||||||||||||||| Sbjct: 46 gggggagccgcgcggcgctg 65
>ref|XM_687926.1| PREDICTED: Danio rerio similar to polyA polymerase alpha (LOC564596), partial mRNA Length = 1180 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccatcagctgcctggtcatt 335 |||||||||||||||||||| Sbjct: 242 ccatcagctgcctggtcatt 223
>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR42I20, complete sequence Length = 164944 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 ttgtttgtaataatgattga 562 |||||||||||||||||||| Sbjct: 79838 ttgtttgtaataatgattga 79857
>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 ttgtttgtaataatgattga 562 |||||||||||||||||||| Sbjct: 105846 ttgtttgtaataatgattga 105865
>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence Length = 203185 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 gtttgttgagtcctatatat 504 |||||||||||||||||||| Sbjct: 130951 gtttgttgagtcctatatat 130970
>gb|L07144.3| Caenorhabditis elegans cosmid R05D3, complete sequence Length = 44910 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 atatcctcatctggtttagtttgt 490 |||||||||||| ||||||||||| Sbjct: 12890 atatcctcatcttgtttagtttgt 12867
>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete sequence Length = 179370 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 tgttgttgtttgtaataatg 557 |||||||||||||||||||| Sbjct: 70747 tgttgttgtttgtaataatg 70766 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,708,449 Number of Sequences: 3902068 Number of extensions: 4708449 Number of successful extensions: 98585 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98222 Number of HSP's gapped (non-prelim): 351 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)