| Clone Name | baal20k06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FLII_HUMAN (Q13045) Protein flightless-1 homolog | 31 | 1.7 | 2 | FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog | 30 | 2.9 | 3 | YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III | 30 | 3.8 | 4 | RS12_ERYGR (O59936) 40S ribosomal protein S12 | 30 | 5.0 | 5 | CP270_RAT (P19225) Cytochrome P450 2C70 (EC 1.14.14.1) (CYPIIC70... | 29 | 6.5 |
|---|
>FLII_HUMAN (Q13045) Protein flightless-1 homolog| Length = 1269 Score = 31.2 bits (69), Expect = 1.7 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Frame = -3 Query: 332 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 165 H Q LPA LHL ST+ + L S SNL + V + P Sbjct: 188 HAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPS 247 Query: 164 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 60 +LNL+ N+ + W E LNL+ N +T Sbjct: 248 LRRLNLSSNQITELSLCIDQWVHVETLNLSRNQLT 282
>FLII_MOUSE (Q9JJ28) Protein flightless-1 homolog| Length = 1271 Score = 30.4 bits (67), Expect = 2.9 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 4/95 (4%) Frame = -3 Query: 332 HEQRTLLPAYPLAGALHLCSTEHKSAQLDVSFHAGSNLN----HGHRQVFVGDYPVLWPE 165 H Q LPA LHL +T+ + L S SNL+ + V + P Sbjct: 188 HAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPECLYTLPS 247 Query: 164 SEQLNLTHNRQVFVGDYPVLWPEPEQLNLTHNCIT 60 +LNL+ N+ + W E LNL+ N +T Sbjct: 248 LRRLNLSSNQIAELSLCIDQWVHLETLNLSRNQLT 282
>YLB5_CAEEL (P46580) Hypothetical protein C34E10.5 in chromosome III| Length = 734 Score = 30.0 bits (66), Expect = 3.8 Identities = 20/81 (24%), Positives = 38/81 (46%) Frame = -3 Query: 494 ASPRQGGRGRSIEAPASAVSARVSCAWLGRNKTSIESRCATKLSYELSCFCSTTHEQRTL 315 +SP+ RSI + A ++R+ W+ T+++ A L ++ FC+ E + Sbjct: 27 SSPKSNSPSRSISS-VEAANSRIHIGWMA---TTLD--VAENLDRHVATFCTRLGEFKYN 80 Query: 314 LPAYPLAGALHLCSTEHKSAQ 252 YP+ G + T + SA+ Sbjct: 81 FVVYPIGGVVRAFWTPNGSAE 101
>RS12_ERYGR (O59936) 40S ribosomal protein S12| Length = 132 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +1 Query: 229 PA*KETSNWADLCSVLHRCSAPASGYAGKSVRCSCVVLQK--QESS 360 P K+ WA LC VL R G A K V CSCVV++ +ESS Sbjct: 80 PDGKQLGEWAGLC-VLDR-----EGNARKVVNCSCVVVKNWGEESS 119
>CP270_RAT (P19225) Cytochrome P450 2C70 (EC 1.14.14.1) (CYPIIC70) (P-450Md)| (P450 P49) Length = 489 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = +2 Query: 185 SLLQKLGDVHGSGSNQHERKHLIGLIYVLCYTDAVLRQADMLVKVCAVHVLCCKNRRVHM 364 +L+ +GD+ G+G+ GL+ +L Y + + + + +V H C R HM Sbjct: 285 NLIVTIGDLFGAGTETTSSTIKYGLLLLLKYPEVTAKIQEEITRVIGRHRRPCMQDRNHM 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,934,760 Number of Sequences: 219361 Number of extensions: 1642174 Number of successful extensions: 3986 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3808 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3983 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)