ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20i17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187552.1| Oryza sativa (japonica cultivar-group), predic... 252 6e-64
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 252 6e-64
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 252 6e-64
4gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 252 6e-64
5dbj|AK071287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 6e-64
6ref|NM_190854.1| Oryza sativa (japonica cultivar-group), predic... 188 8e-45
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 188 8e-45
8dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D... 188 8e-45
9dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 188 8e-45
10gb|AY344058.1| Sorghum bicolor partner of Nob1 mRNA, complete cds 100 5e-18
11gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 50 0.004
12dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.28
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
14dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
15dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
16gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene... 44 0.28
17gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.28
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.1
19ref|NM_112167.2| Arabidopsis thaliana nucleic acid binding AT3G1... 40 4.3
20gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 4.3
21gb|BT015168.1| Arabidopsis thaliana At3g13230 gene, complete cds 40 4.3
22gb|AE007215.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 4.3
23ref|XM_540898.2| PREDICTED: Canis familiaris similar to solute c... 40 4.3
24emb|X97705.1|LMVEPP Lettuce mosaic virus (strain E) mRNA for pol... 40 4.3
25gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.3
26emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 4.3
27gb|BT008667.1| Arabidopsis thaliana clone RAFL17-07-B10 (R50354)... 40 4.3
28dbj|AK166500.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cD... 40 4.3
29gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.3
30emb|BX825460.1|CNS0A50J Arabidopsis thaliana Full-length cDNA Co... 40 4.3
31gb|AY089052.1| Arabidopsis thaliana clone 22588 mRNA, complete s... 40 4.3
32gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.3
33dbj|AB024034.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.3 
>ref|NM_187552.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 621

 Score =  252 bits (127), Expect = 6e-64
 Identities = 177/194 (91%)
 Strand = Plus / Plus

                                                                       
Query: 133 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 192
           ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 1   atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 60

                                                                       
Query: 193 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgntttgcg 252
           ||||||||||||||| ||||||||| | | ||||| | |||||||| |||||| || |||
Sbjct: 61  gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 120

                                                                       
Query: 253 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 312
           ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||
Sbjct: 121 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 180

                         
Query: 313 atccgcatgaacct 326
           ||||||||||||||
Sbjct: 181 atccgcatgaacct 194
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  252 bits (127), Expect = 6e-64
 Identities = 177/194 (91%)
 Strand = Plus / Minus

                                                                          
Query: 133    atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 192
              ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 837939 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 837880

                                                                          
Query: 193    gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgntttgcg 252
              ||||||||||||||| ||||||||| | | ||||| | |||||||| |||||| || |||
Sbjct: 837879 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 837820

                                                                          
Query: 253    ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 312
              ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||
Sbjct: 837819 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 837760

                            
Query: 313    atccgcatgaacct 326
              ||||||||||||||
Sbjct: 837759 atccgcatgaacct 837746
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  252 bits (127), Expect = 6e-64
 Identities = 177/194 (91%)
 Strand = Plus / Minus

                                                                          
Query: 133    atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 192
              ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 837937 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 837878

                                                                          
Query: 193    gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgntttgcg 252
              ||||||||||||||| ||||||||| | | ||||| | |||||||| |||||| || |||
Sbjct: 837877 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 837818

                                                                          
Query: 253    ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 312
              ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||
Sbjct: 837817 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 837758

                            
Query: 313    atccgcatgaacct 326
              ||||||||||||||
Sbjct: 837757 atccgcatgaacct 837744
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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
              complete sequence
          Length = 162132

 Score =  252 bits (127), Expect = 6e-64
 Identities = 177/194 (91%)
 Strand = Plus / Minus

                                                                          
Query: 133    atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 192
              ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 133484 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 133425

                                                                          
Query: 193    gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgntttgcg 252
              ||||||||||||||| ||||||||| | | ||||| | |||||||| |||||| || |||
Sbjct: 133424 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 133365

                                                                          
Query: 253    ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 312
              ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||
Sbjct: 133364 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 133305

                            
Query: 313    atccgcatgaacct 326
              ||||||||||||||
Sbjct: 133304 atccgcatgaacct 133291
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>dbj|AK071287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J06, full
           insert sequence
          Length = 958

 Score =  252 bits (127), Expect = 6e-64
 Identities = 177/194 (91%)
 Strand = Plus / Plus

                                                                       
Query: 133 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 192
           ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||
Sbjct: 168 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 227

                                                                       
Query: 193 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgntttgcg 252
           ||||||||||||||| ||||||||| | | ||||| | |||||||| |||||| || |||
Sbjct: 228 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 287

                                                                       
Query: 253 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 312
           ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||
Sbjct: 288 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 347

                         
Query: 313 atccgcatgaacct 326
           ||||||||||||||
Sbjct: 348 atccgcatgaacct 361
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>ref|NM_190854.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 663

 Score =  188 bits (95), Expect = 8e-45
 Identities = 151/170 (88%)
 Strand = Plus / Plus

                                                                       
Query: 157 gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 216
           |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| |||
Sbjct: 67  gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 126

                                                                       
Query: 217 taccgcaaggtccaggtgccgccgcaccgntttgcgccgctgaagaaggcgtggttggat 276
           | ||| ||||| | |||||||| |||||| || || |||||||||||||||||| |||| 
Sbjct: 127 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 186

                                                             
Query: 277 atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacct 326
           |||||||| || |||||||||||||||||| ||||||| |||||||||||
Sbjct: 187 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacct 236
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  188 bits (95), Expect = 8e-45
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                            
Query: 157      gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 216
                |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| |||
Sbjct: 33477381 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 33477322

                                                                            
Query: 217      taccgcaaggtccaggtgccgccgcaccgntttgcgccgctgaagaaggcgtggttggat 276
                | ||| ||||| | |||||||| |||||| || || |||||||||||||||||| |||| 
Sbjct: 33477321 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 33477262

                                                                  
Query: 277      atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacct 326
                |||||||| || |||||||||||||||||| ||||||| |||||||||||
Sbjct: 33477261 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacct 33477212
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>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  188 bits (95), Expect = 8e-45
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                         
Query: 157   gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 216
             |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| |||
Sbjct: 22578 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 22519

                                                                         
Query: 217   taccgcaaggtccaggtgccgccgcaccgntttgcgccgctgaagaaggcgtggttggat 276
             | ||| ||||| | |||||||| |||||| || || |||||||||||||||||| |||| 
Sbjct: 22518 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 22459

                                                               
Query: 277   atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacct 326
             |||||||| || |||||||||||||||||| ||||||| |||||||||||
Sbjct: 22458 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacct 22409
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0415A04
          Length = 160669

 Score =  188 bits (95), Expect = 8e-45
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                          
Query: 157    gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 216
              |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| |||
Sbjct: 153547 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 153488

                                                                          
Query: 217    taccgcaaggtccaggtgccgccgcaccgntttgcgccgctgaagaaggcgtggttggat 276
              | ||| ||||| | |||||||| |||||| || || |||||||||||||||||| |||| 
Sbjct: 153487 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 153428

                                                                
Query: 277    atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacct 326
              |||||||| || |||||||||||||||||| ||||||| |||||||||||
Sbjct: 153427 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacct 153378
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>gb|AY344058.1| Sorghum bicolor partner of Nob1 mRNA, complete cds
          Length = 819

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 147/177 (83%), Gaps = 2/177 (1%)
 Strand = Plus / Plus

                                                                       
Query: 151 ggcggcgtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcgg 210
           |||| ||||||||||||||  ||||| ||||||||||| || ||||||||||||||| ||
Sbjct: 151 ggcgccgtggagaagccgcaattcgatgctctgatgccgagtgagatgagcggcgggagg 210

                                                                       
Query: 211 ccacagtaccgcaaggtccaggtgccgccgcaccgntttgcgccgctgaag-aaggcgtg 269
           || |||| ||| || ||    ||||||| |||||| || |||||||| |||  | || ||
Sbjct: 211 ccccagttccgaaaagtgaccgtgccgcagcaccggttcgcgccgctcaagcgatgc-tg 269

                                                                    
Query: 270 gttggatatctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacct 326
           | |||| |||||||| || || ||||||||||||||| ||||||| |||||||||||
Sbjct: 270 gatggaaatctacacgcccgtgtacgagcacatgaagatcgacatacgcatgaacct 326
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 135     ggcggtggacgcggccggcggcgtg 159
               |||||||||||||||||||||||||
Sbjct: 4211491 ggcggtggacgcggccggcggcgtg 4211467



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 135     ggcggtggacgcggccggcggcgtg 159
               |||||||||||||||||||||||||
Sbjct: 1710155 ggcggtggacgcggccggcggcgtg 1710179
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 125     ctgccgccatggcggtggacgcggccggcg 154
               ||||||||||||||||||| |||| |||||
Sbjct: 3492674 ctgccgccatggcggtggatgcggacggcg 3492645
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 136      gcggtggacgcggccggcggcg 157
                ||||||||||||||||||||||
Sbjct: 18403610 gcggtggacgcggccggcggcg 18403631
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463G11
          Length = 154188

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 136    gcggtggacgcggccggcggcg 157
              ||||||||||||||||||||||
Sbjct: 118346 gcggtggacgcggccggcggcg 118367
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463D04
          Length = 145828

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 136   gcggtggacgcggccggcggcg 157
             ||||||||||||||||||||||
Sbjct: 65484 gcggtggacgcggccggcggcg 65505
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>gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene, complete cds
          Length = 2757

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 136  gcggtggacgcggccggcggcg 157
            ||||||||||||||||||||||
Sbjct: 2341 gcggtggacgcggccggcggcg 2362
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 125     ctgccgccatggcggtggacgcggccggcg 154
               ||||||||||||||||||| |||| |||||
Sbjct: 3488407 ctgccgccatggcggtggatgcggacggcg 3488378
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 250     gcgccgctgaagaaggcgtgg 270
               |||||||||||||||||||||
Sbjct: 5887157 gcgccgctgaagaaggcgtgg 5887137
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>ref|NM_112167.2| Arabidopsis thaliana nucleic acid binding AT3G13230 mRNA, complete
           cds
          Length = 891

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 259 aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
           ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 269 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 324
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     ccggcggcgtggagaagccg 168
               ||||||||||||||||||||
Sbjct: 1962557 ccggcggcgtggagaagccg 1962538
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>gb|BT015168.1| Arabidopsis thaliana At3g13230 gene, complete cds
          Length = 648

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 259 aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
           ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 160 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 215
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>gb|AE007215.1| Sinorhizobium meliloti 1021 plasmid pSymA section 21 of 121 of the
            complete plasmid sequence
          Length = 10029

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  ggtggacgcggccggcggcg 157
            ||||||||||||||||||||
Sbjct: 7955 ggtggacgcggccggcggcg 7974
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>ref|XM_540898.2| PREDICTED: Canis familiaris similar to solute carrier family 3
           (activators of dibasic and neutral amino acid
           transport), member 2 isoform a (LOC483777), mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 130 gccatggcggtggacgcggccggcggcg 157
           ||||||||||||| || |||||||||||
Sbjct: 199 gccatggcggtggtcgtggccggcggcg 226
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>emb|X97705.1|LMVEPP Lettuce mosaic virus (strain E) mRNA for polyprotein
          Length = 10080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  agatggaagtcgacaaagct 93
           ||||||||||||||||||||
Sbjct: 642 agatggaagtcgacaaagct 661
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     gccggcggcgtggagaagcc 167
               ||||||||||||||||||||
Sbjct: 1812825 gccggcggcgtggagaagcc 1812806
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   ccatggcggtggacgcggcc 150
             ||||||||||||||||||||
Sbjct: 71709 ccatggcggtggacgcggcc 71690
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>gb|BT008667.1| Arabidopsis thaliana clone RAFL17-07-B10 (R50354)  mRNA, complete
           sequence
          Length = 1275

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 259 aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
           ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 639 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 694
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>dbj|AK166500.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN
           full-length enriched library, clone:G930037B09
           product:Similar to transmembrane protein 1 homolog [Homo
           sapiens], full insert sequence
          Length = 536

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 ggtggacgcggccggcggcg 157
           ||||||||||||||||||||
Sbjct: 1   ggtggacgcggccggcggcg 20
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     aaggtccaggtgccgccgca 242
               ||||||||||||||||||||
Sbjct: 1740047 aaggtccaggtgccgccgca 1740066
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>emb|BX825460.1|CNS0A50J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL38ZE10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 828

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 259 aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
           ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 222 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 277
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>gb|AY089052.1| Arabidopsis thaliana clone 22588 mRNA, complete sequence
          Length = 867

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 259 aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
           ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 269 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 324
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     ggcggtggacgcggccggcg 154
               ||||||||||||||||||||
Sbjct: 3383335 ggcggtggacgcggccggcg 3383354



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    ggtggacgcggccggcggcg 157
              ||||||||||||||||||||
Sbjct: 123100 ggtggacgcggccggcggcg 123119
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>dbj|AB024034.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11
          Length = 86233

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 259   aagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgacat 314
             ||||| || ||||||||||||||||| ||  | ||||| || |||||||| |||||
Sbjct: 10745 aagaaagcatggttggatatctacacacccatttacgatcagatgaaggttgacat 10800


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,443,270
Number of Sequences: 3902068
Number of extensions: 1443270
Number of successful extensions: 31191
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30498
Number of HSP's gapped (non-prelim): 693
length of query: 326
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 304
effective length of database: 17,147,199,772
effective search space: 5212748730688
effective search space used: 5212748730688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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