ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APE2_SULTO (Q974N6) Probable aminopeptidase 2 (EC 3.4.11.-) 31 3.1
2CAD17_HUMAN (Q12864) Cadherin-17 precursor (Liver-intestine-cadh... 30 6.8
3Y453_METJA (Q57895) Hypothetical protein MJ0453 30 6.8
4UPPP_BUCAP (Q8KA52) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Un... 30 8.9

>APE2_SULTO (Q974N6) Probable aminopeptidase 2 (EC 3.4.11.-)|
          Length = 781

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 438 DAYPIYYQKIPYMNTQKSENILSVRITKFAKNKKEEEKRTWKYRFSTF 295
           D Y + Y+ +PY            ++ +F+K K E  +RT+ Y  STF
Sbjct: 569 DKYKLLYEVLPY------------QVKRFSKRKDELSRRTYSYLLSTF 604



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>CAD17_HUMAN (Q12864) Cadherin-17 precursor (Liver-intestine-cadherin)|
           (LI-cadherin) (Intestinal peptide-associated transporter
           HPT-1)
          Length = 832

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 180 VWKVPKIVEATREHTE*PH----SQVGLCDSSCQECKAAKQKFPRF 55
           +WK PK VE     T+ PH    +QV   D   Q     K+K PRF
Sbjct: 238 IWKAPKPVEMVENSTD-PHPIKITQVRWNDPGAQYSLVDKEKLPRF 282



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>Y453_METJA (Q57895) Hypothetical protein MJ0453|
          Length = 107

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 474 QGEMVSGLPKLIDAYPIYYQKIPYMNTQKSENILSVRITKFAKNKKEEEK 325
           +G  + G+P +  AY   Y   PY        +L + + +  K+KKEE+K
Sbjct: 42  EGIFLIGIPPIPVAYEDNYVIFPYTKPCYGTFVLKINLDEINKDKKEEKK 91



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>UPPP_BUCAP (Q8KA52) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 264

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 131 HSVCSLVASTILGT-FHTKIKRTFDTQNIIQSCLLGFFYFI 250
           H + S++ +  LG  F+ KIK  F+  N++ + +LG F+ I
Sbjct: 87  HVLISILPTMFLGLIFYNKIKSLFNPTNVMYALILGGFFLI 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,920,899
Number of Sequences: 219361
Number of extensions: 2160597
Number of successful extensions: 4794
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4794
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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