>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence
          Length = 195790

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 465    tttctccctgtaaaccatctttt 487
              |||||||||||||||||||||||
Sbjct: 172927 tttctccctgtaaaccatctttt 172905

>gb|AF125457.1| Caenorhabditis elegans cosmid Y50F7A, complete sequence
          Length = 31933

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 285   tttttccaaaaaacgttgaaaa 306
             ||||||||||||||||||||||
Sbjct: 21780 tttttccaaaaaacgttgaaaa 21801

>gb|AC024877.2| Caenorhabditis elegans cosmid Y95B8A, complete sequence
          Length = 104970

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 281   gaactttttccaaaaaacgttgaaaa 306
             |||||||||||||||||| |||||||
Sbjct: 21495 gaactttttccaaaaaactttgaaaa 21520

>gb|AF016660.3| Caenorhabditis elegans cosmid F53A10, complete sequence
          Length = 33272

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  tttttccaaaaaacgttgaaaa 306
            ||||||||||||||||||||||
Sbjct: 5647 tttttccaaaaaacgttgaaaa 5668

>gb|AC106741.3| Homo sapiens chromosome 16 clone RP11-105F24, complete sequence
          Length = 176424

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 506    tttccatatgggaaatctgtac 527
              ||||||||||||||||||||||
Sbjct: 118624 tttccatatgggaaatctgtac 118645

>emb|AL928634.8| Mouse DNA sequence from clone RP23-363G7 on chromosome 4, complete
            sequence
          Length = 156427

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 287  tttccaaaaaacgttgaaaacc 308
            ||||||||||||||||||||||
Sbjct: 4018 tttccaaaaaacgttgaaaacc 3997

>gb|AC109585.4| Homo sapiens chromosome 3 clone RP11-802J21, complete sequence
          Length = 213077

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 631   gcaatcagttctttatactgt 651
             |||||||||||||||||||||
Sbjct: 94219 gcaatcagttctttatactgt 94199

>gb|AC127259.3| Mus musculus BAC clone RP24-304A20 from chromosome 9, complete sequence
          Length = 162717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 454    tcctgacaccatttctccctgtaaa 478
              |||||||||||||||||||| ||||
Sbjct: 117377 tcctgacaccatttctccctttaaa 117401

>emb|AL163284.2|HS21C084 Homo sapiens chromosome 21 segment HS21C084
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 406    tggtattttttggtaatatat 426
              |||||||||||||||||||||
Sbjct: 183933 tggtattttttggtaatatat 183913

>emb|BX511109.4| Zebrafish DNA sequence from clone DKEY-288G16 in linkage group 7,
             complete sequence
          Length = 124061

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 284   ctttttccaaaaaacgttgaaaacctatatttc 316
             |||||| |||||||| ||| |||||||||||||
Sbjct: 78914 ctttttacaaaaaactttgcaaacctatatttc 78882

>emb|BX323584.9| Zebrafish DNA sequence from clone DKEY-105I23 in linkage group 25,
             complete sequence
          Length = 140524

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    ggtgaaatctgggaaattttt 71
             |||||||||||||||||||||
Sbjct: 14553 ggtgaaatctgggaaattttt 14573

>dbj|BS000160.1| Pan troglodytes chromosome 22 clone:PTB-043M13, map 22, complete
             sequences
          Length = 141932

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   tggtattttttggtaatatat 426
             |||||||||||||||||||||
Sbjct: 87847 tggtattttttggtaatatat 87827

>emb|AL833793.10| Mouse DNA sequence from clone RP23-366F22 on chromosome 2, complete
             sequence
          Length = 124256

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 91    ctggcagctgctgtcacaaagtcct 115
             |||||||| ||||||||||||||||
Sbjct: 61013 ctggcagcagctgtcacaaagtcct 60989

>emb|AL773573.1|HS146B4 Homo sapiens chromosome 21 from PAC RP1-146B4 map 21q22.2,D21S349-MX1,
             complete sequence
          Length = 107830

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   tggtattttttggtaatatat 426
             |||||||||||||||||||||
Sbjct: 17348 tggtattttttggtaatatat 17328

>emb|CT010457.7| Mouse DNA sequence from clone RP23-96M8 on chromosome 9, complete
            sequence
          Length = 259964

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 454  tcctgacaccatttctccctgtaaa 478
            |||||||||||||||||||| ||||
Sbjct: 9745 tcctgacaccatttctccctttaaa 9769

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   acacaaaacataatacaaag 222
             ||||||||||||||||||||
Sbjct: 49931 acacaaaacataatacaaag 49950

>gb|AC125069.4| Mus musculus BAC clone RP23-436E5 from chromosome 2, complete sequence
          Length = 199446

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 479    ccatctttttactatgtgggaatt 502
              ||||||||||||||||| ||||||
Sbjct: 138481 ccatctttttactatgtaggaatt 138458

>emb|CR704974.2|CNS0G6WQ Tetraodon nigroviridis full-length cDNA
          Length = 528

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 13  tcctcattggtaaggttttaattg 36
           ||||| ||||||||||||||||||
Sbjct: 438 tcctctttggtaaggttttaattg 415

>ref|XM_733419.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000810.04.0)
           partial mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  atttttgcttcgctgccttg 85
           ||||||||||||||||||||
Sbjct: 125 atttttgcttcgctgccttg 106

>ref|XM_781331.1| PREDICTED: Strongylocentrotus purpuratus similar to leukocyte
           receptor cluster (LRC) member 1 (LOC581324), mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 cttgttgcttccacaatttt 165
           ||||||||||||||||||||
Sbjct: 569 cttgttgcttccacaatttt 550

>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    gttgcttccacaattttggg 168
              ||||||||||||||||||||
Sbjct: 165764 gttgcttccacaattttggg 165783

>gb|AC090206.7| Homo sapiens chromosome 18, clone RP11-349H17, complete sequence
          Length = 91609

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   gaattagatttccatatggg 517
             ||||||||||||||||||||
Sbjct: 17644 gaattagatttccatatggg 17663

>gb|AC112777.7| Homo sapiens 12 BAC RP11-424C20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160380

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    gttgcttccacaattttggg 168
              ||||||||||||||||||||
Sbjct: 130802 gttgcttccacaattttggg 130783

>gb|AC109808.6| Homo sapiens chromosome 15, clone CTD-2147F2, complete sequence
          Length = 136631

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 154  ttccacaattttgggaaccttcca 177
            ||||||||||||| ||||||||||
Sbjct: 6020 ttccacaattttgtgaaccttcca 5997

>gb|AC026523.9| Homo sapiens chromosome 15, clone RP11-461F11, complete sequence
          Length = 175770

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    ttccacaattttgggaaccttcca 177
              ||||||||||||| ||||||||||
Sbjct: 171541 ttccacaattttgtgaaccttcca 171518

>gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, complete sequence
          Length = 182051

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   gttgcttccacaattttggg 168
             ||||||||||||||||||||
Sbjct: 31431 gttgcttccacaattttggg 31450

>emb|AL928556.7| Zebrafish DNA sequence from clone DKEY-63M7, complete sequence
          Length = 196404

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 186    taaaaagaaccttcgacacacaaaacat 213
              |||||| ||||||| |||||||||||||
Sbjct: 189622 taaaaaaaaccttctacacacaaaacat 189595

>dbj|AP001376.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775E2, complete
             sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   atatgggaaatctgtacatc 530
             ||||||||||||||||||||
Sbjct: 56219 atatgggaaatctgtacatc 56238

>dbj|AP001533.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-788M5, complete
              sequence
          Length = 207183

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    gttgcttccacaattttggg 168
              ||||||||||||||||||||
Sbjct: 139334 gttgcttccacaattttggg 139315

>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    tttggtaatatattggatat 433
              ||||||||||||||||||||
Sbjct: 244301 tttggtaatatattggatat 244320

>emb|CR854829.14| Zebrafish DNA sequence from clone DKEY-285B23 in linkage group 15,
              complete sequence
          Length = 166918

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    attagatttccatatgggaa 519
              ||||||||||||||||||||
Sbjct: 107543 attagatttccatatgggaa 107524

>emb|AL928721.5| Mouse DNA sequence from clone RP23-402N20 on chromosome 2, complete
             sequence
          Length = 79405

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 479   ccatctttttactatgtgggaatt 502
             ||||||||||||||||| ||||||
Sbjct: 59438 ccatctttttactatgtaggaatt 59415

>emb|AL844553.4| Mouse DNA sequence from clone RP23-255J15 on chromosome 2, complete
             sequence
          Length = 82080

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 633   aatcagttctttatactgta 652
             ||||||||||||||||||||
Sbjct: 44113 aatcagttctttatactgta 44094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,317,250
Number of Sequences: 3902068
Number of extensions: 6317250
Number of successful extensions: 116506
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116431
Number of HSP's gapped (non-prelim): 75
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)