ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20f20 |
|---|---|
| Clone Library Name | barley_pub |
>VST2_HEVRH (Q00270) Structural protein 2 (Fragment)| Length = 485 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 4/27 (14%) Frame = +2 Query: 161 FAAPLSPLLP-QRGRDTH---GEASKY 229 +AAPLSPLLP Q G +TH EAS Y Sbjct: 24 YAAPLSPLLPLQDGTNTHIMATEASNY 50
>VST2_HEVPA (P33426) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 4/27 (14%) Frame = +2 Query: 161 FAAPLSPLLP-QRGRDTH---GEASKY 229 +AAPLSPLLP Q G +TH EAS Y Sbjct: 156 YAAPLSPLLPLQDGTNTHIMATEASNY 182
>VST2_HEVMY (Q04611) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 4/27 (14%) Frame = +2 Query: 161 FAAPLSPLLP-QRGRDTH---GEASKY 229 +AAPLSPLLP Q G +TH EAS Y Sbjct: 156 YAAPLSPLLPLQDGTNTHIMATEASNY 182
>VST2_HEVBU (P29326) Structural protein 2 precursor| Length = 660 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 4/27 (14%) Frame = +2 Query: 161 FAAPLSPLLP-QRGRDTH---GEASKY 229 +AAPLSPLLP Q G +TH EAS Y Sbjct: 156 YAAPLSPLLPLQDGTNTHIMATEASNY 182
>CRBA4_CHICK (P49152) Beta crystallin A4| Length = 196 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +1 Query: 241 AWVKGNSCGFYGREVALRGASFPDW 315 AWV CGF G++ L +P W Sbjct: 53 AWVGFEHCGFQGQQFVLERGEYPCW 77
>IF2G_METJA (Q58657) Translation initiation factor 2 gamma subunit| (eIF-2-gamma) (aIF2-gamma) Length = 411 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = -1 Query: 315 PIREGSAAKSNFAAIKTTGIPFNPSDD*TYLLASP*VSLPLCGRRGESGAANQRVGA 145 P+R G N T G+ + D +A + LP+C G+ A ++RVG+ Sbjct: 347 PLRTGEVLMLNIGTATTAGVITSARGD----IADIKLKLPICAEIGDRVAISRRVGS 399
>ACCA_DEIRA (Q9RV16) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 316 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +2 Query: 113 RSCGSQSYIFSAPTLWFAAPLSPLLPQRGRDT 208 R G + P W P+ LL Q+GRDT Sbjct: 87 RRFGDDPALIGGPARWQGRPVMLLLQQKGRDT 118
>SNAT_PANTR (Q5IS55) Serotonin N-acetyltransferase (EC 2.3.1.87) (Aralkylamine| N-acetyltransferase) (AA-NAT) (Serotonin acetylase) Length = 207 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 106 RLPLLRFAELHLLGPYPLVRRAAL 177 R P+L + LH LG P VRRAAL Sbjct: 135 RGPILLWRYLHHLGSQPAVRRAAL 158
>SNAT_HUMAN (Q16613) Serotonin N-acetyltransferase (EC 2.3.1.87) (Aralkylamine| N-acetyltransferase) (AA-NAT) (Serotonin acetylase) Length = 207 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 106 RLPLLRFAELHLLGPYPLVRRAAL 177 R P+L + LH LG P VRRAAL Sbjct: 135 RGPILLWRYLHHLGSQPAVRRAAL 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,957,011 Number of Sequences: 219361 Number of extensions: 548537 Number of successful extensions: 1168 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1168 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
