ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20e03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 121 bits (61), Expect = 3e-24 Identities = 175/213 (82%) Strand = Plus / Minus Query: 310 ataatctggtgtggtggaagactgatctttggacccgatgccaaggctactctgctatct 369 ||||||| ||| |||||||| | ||||||||||| ||||||||||| |||||||||||| Sbjct: 187341 ataatcttgtgcggtggaaggtttatctttggaccagatgccaaggccactctgctatct 187282 Query: 370 ttctcgctgatcacggcccctgttgttgtcttctgcatctttgtgggcaaaaatctcata 429 ||||| || || | ||| |||| ||||||||| |||||||| | |||||||| Sbjct: 187281 ttctctctaattgcaatcccggttgccgtcttctgctactttgtggcgaggcatctcata 187222 Query: 430 cacatctttcctgcatataatgctgggtatgcaattctggttgttaccgtggtcctgaca 489 ||||| ||||||||||||||||| |||||||||||||| | ||||||| | ||||| || Sbjct: 187221 cacatgtttcctgcatataatgcagggtatgcaattcttgctgttaccatagtcctctca 187162 Query: 490 attcatgtgagtaagcattctttgcctatgtac 522 ||| |||| |||| || |||| ||||| ||||| Sbjct: 187161 atttatgtaagtaggctttctgtgcctttgtac 187129 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 264 catggccaagcagctgcgggtctaccaagtctggagaggcaacaac 309 |||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 188153 catggccaagcagcagcgggtttaccaagtctggaaaggcaacaac 188108
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 121 bits (61), Expect = 3e-24 Identities = 175/213 (82%) Strand = Plus / Minus Query: 310 ataatctggtgtggtggaagactgatctttggacccgatgccaaggctactctgctatct 369 ||||||| ||| |||||||| | ||||||||||| ||||||||||| |||||||||||| Sbjct: 102676 ataatcttgtgcggtggaaggtttatctttggaccagatgccaaggccactctgctatct 102617 Query: 370 ttctcgctgatcacggcccctgttgttgtcttctgcatctttgtgggcaaaaatctcata 429 ||||| || || | ||| |||| ||||||||| |||||||| | |||||||| Sbjct: 102616 ttctctctaattgcaatcccggttgccgtcttctgctactttgtggcgaggcatctcata 102557 Query: 430 cacatctttcctgcatataatgctgggtatgcaattctggttgttaccgtggtcctgaca 489 ||||| ||||||||||||||||| |||||||||||||| | ||||||| | ||||| || Sbjct: 102556 cacatgtttcctgcatataatgcagggtatgcaattcttgctgttaccatagtcctctca 102497 Query: 490 attcatgtgagtaagcattctttgcctatgtac 522 ||| |||| |||| || |||| ||||| ||||| Sbjct: 102496 atttatgtaagtaggctttctgtgcctttgtac 102464 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 264 catggccaagcagctgcgggtctaccaagtctggagaggcaacaac 309 |||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 103488 catggccaagcagcagcgggtttaccaagtctggaaaggcaacaac 103443
>ref|XM_749938.1| Aspergillus fumigatus Af293 anucleate primary sterigmata ApsB (Afu3g05720) partial mRNA Length = 4914 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgactg 193 |||||||||||||||||||||||||| Sbjct: 1421 tgcggctgcggctgcgactgcgactg 1396
>ref|NM_009453.1| Mus musculus U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 (U2af1-rs2), transcript variant 1, mRNA Length = 2735 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||||||||||||||||||||| Sbjct: 1633 tgcggctgcggctgcgactgcgact 1609 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgactg 193 |||||||||||||||| ||||||||| Sbjct: 1639 tgcggctgcggctgcggctgcgactg 1614
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 24519119 ggctggttgcggctgcggctgcggctgcg 24519091
>dbj|AK107528.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G06, full insert sequence Length = 597 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 347 ggctggttgcggctgcggctgcggctgcg 375
>dbj|AK100436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M17, full insert sequence Length = 2965 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 178 ggctggttgcggctgcggctgcggctgcg 150
>dbj|AK066259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H11, full insert sequence Length = 3668 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 195 ggctggttgcggctgcggctgcggctgcg 167
>gb|AY108469.1| Zea mays PCO103837 mRNA sequence Length = 2100 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgactg 193 ||||||||||||||||||||||||| Sbjct: 884 gcggctgcggctgcgactgcgactg 908
>emb|BX469932.7| Mouse DNA sequence from clone RP23-391L6 on chromosome X, complete sequence Length = 116319 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||||||||||||||||||||| Sbjct: 42708 tgcggctgcggctgcgactgcgact 42732 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgactg 193 |||||||||||||||| ||||||||| Sbjct: 42702 tgcggctgcggctgcggctgcgactg 42727
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 24447325 ggctggttgcggctgcggctgcggctgcg 24447297
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 161 ggctggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||||||| ||||| Sbjct: 90150 ggctggttgcggctgcggctgcggctgcg 90122
>dbj|D45205.1|MUSU2AF1R2 Mouse U2af1-rs2 mRNA, complete cds Length = 2735 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||||||||||||||||||||| Sbjct: 1633 tgcggctgcggctgcgactgcgact 1609 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgactg 193 |||||||||||||||| ||||||||| Sbjct: 1639 tgcggctgcggctgcggctgcgactg 1614
>ref|XM_751392.1| Ustilago maydis 521 hypothetical protein (UM00338.1) partial mRNA Length = 5742 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgactggtg 196 ||||||||||||||| |||||||||||| Sbjct: 5678 gcggctgcggctgcggctgcgactggtg 5651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactg 187 |||||||||||||||||||| Sbjct: 5673 tgcggctgcggctgcgactg 5654
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgac 191 |||||||||||||||||||||||| Sbjct: 1720567 tgcggctgcggctgcgactgcgac 1720590 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 72461 tgcggctgcggctgcgactgc 72441
>ref|NM_212379.1| Eremothecium gossypii AFR695Cp (AFR695C), mRNA Length = 2271 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgac 191 |||||||||||||||||||||||| Sbjct: 839 tgcggctgcggctgcgactgcgac 816
>ref|XM_657088.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4576.2), mRNA Length = 1380 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 ggctgcggctgcgactgcgactg 193 ||||||||||||||||||||||| Sbjct: 1353 ggctgcggctgcgactgcgactg 1375
>emb|BX649391.13| Zebrafish DNA sequence from clone DKEY-1K23 in linkage group 5, complete sequence Length = 133337 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 171 ggctgcggctgcgactgcgactg 193 ||||||||||||||||||||||| Sbjct: 91381 ggctgcggctgcgactgcgactg 91359
>gb|AF274009.1|AF274009 Aspergillus nidulans transmembrane protein UsgS (usgS) and formamidase (fmdS) genes, complete cds Length = 4770 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 171 ggctgcggctgcgactgcgactg 193 ||||||||||||||||||||||| Sbjct: 4760 ggctgcggctgcgactgcgactg 4738
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 17280 tgcggctgcggctgcgactgcg 17301
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 ctggttgcggctgcggctgcgactgc 188 ||||||||||||||||||||| |||| Sbjct: 5459 ctggttgcggctgcggctgcggctgc 5484 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgact 192 ||||||||||||||||||||| Sbjct: 1490932 gctgcggctgcgactgcgact 1490912 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgac 191 |||||||||||||||||||| Sbjct: 35685034 gctgcggctgcgactgcgac 35685015
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 76063 tgcggctgcggctgcgactgcg 76084
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 136270 tgcggctgcggctgcgactgcg 136291
>ref|XM_755906.1| Ustilago maydis 521 hypothetical protein (UM04852.1) partial mRNA Length = 4362 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 164 tggttgcggctgcggctgcgactgcgactg 193 ||||||||| ||||| |||||||||||||| Sbjct: 1063 tggttgcggttgcggttgcgactgcgactg 1034 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcgactg 193 |||||||| |||| ||||||||||||||| Sbjct: 1056 ggttgcggttgcgactgcgactgcgactg 1028
>ref|XM_741779.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g00580) partial mRNA Length = 702 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgactg 193 |||||||||| ||||||||||||||| Sbjct: 504 tgcggctgcgactgcgactgcgactg 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctgcggctgcgactgcgactg 193 ||||||||||||||||||||| Sbjct: 503 ctgcggctgcgactgcgactg 523
>ref|XM_750048.1| Aspergillus fumigatus Af293 involucrin repeat protein (Afu2g08060) partial mRNA Length = 16617 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 2062 tgcggctgcggctgcgactgcg 2041
>ref|NM_005626.3| Homo sapiens splicing factor, arginine/serine-rich 4 (SFRS4), mRNA Length = 2158 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1213 gctgcggctgcgactgcgactg 1192
>emb|AL357500.17| Human DNA sequence from clone RP11-242O24 on chromosome 1 Contains the 3' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), three novel genes, the 3' end of the SFRS4 gene for splicing factor arginine/serine-rich 4 and a CpG island, complete sequence Length = 112392 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 84579 gctgcggctgcgactgcgactg 84600
>gb|AC063952.15| Homo sapiens 3 BAC RP11-174O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152024 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 gtggatttcatttctgcccttc 215 |||||||||||||||||||||| Sbjct: 46067 gtggatttcatttctgcccttc 46046
>gb|BT008254.1| Synthetic construct Homo sapiens splicing factor, arginine/serine-rich 4 mRNA, partial cds Length = 1485 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1116 gctgcggctgcgactgcgactg 1095
>gb|BT007415.1| Homo sapiens splicing factor, arginine/serine-rich 4 mRNA, complete cds Length = 1485 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1116 gctgcggctgcgactgcgactg 1095
>emb|CR595944.1| full-length cDNA clone CS0DM006YK24 of Fetal liver of Homo sapiens (human) Length = 2235 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1236 gctgcggctgcgactgcgactg 1215
>emb|CR594929.1| full-length cDNA clone CS0DJ013YI07 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1372 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 376 gctgcggctgcgactgcgactg 355
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 163 ctggttgcggctgcggctgcgactgc 188 ||||||||||||||||||||| |||| Sbjct: 119759 ctggttgcggctgcggctgcggctgc 119734
>dbj|AK033653.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130207N01 product:weakly similar to FLJ00011 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 1798 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 435 tgcggctgcggctgcgactgcg 414
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 ctggttgcggctgcggctgcgactgc 188 ||||||||||||||||||||| |||| Sbjct: 5459 ctggttgcggctgcggctgcggctgc 5484 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgact 192 ||||||||||||||||||||| Sbjct: 1490930 gctgcggctgcgactgcgact 1490910 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgac 191 |||||||||||||||||||| Sbjct: 35775107 gctgcggctgcgactgcgac 35775088
>dbj|AK223444.1| Homo sapiens mRNA for splicing factor, arginine/serine-rich 4 variant, clone: FCC112H02 Length = 1728 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1266 gctgcggctgcgactgcgactg 1245
>ref|NM_177605.2| Mus musculus PDZ domain containing 7 (Pdzd7), mRNA Length = 1798 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 435 tgcggctgcggctgcgactgcg 414
>gb|AY892104.1| Synthetic construct Homo sapiens clone FLH026098.01L splicing factor arginine/serine-rich 4 (SFRS4) mRNA, partial cds Length = 1485 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1116 gctgcggctgcgactgcgactg 1095
>gb|AY889646.1| Synthetic construct Homo sapiens clone FLH026101.01X splicing factor arginine/serine-rich 4 (SFRS4) mRNA, complete cds Length = 1485 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1116 gctgcggctgcgactgcgactg 1095
>dbj|AK120771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H17, full insert sequence Length = 750 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 ctggttgcggctgcggctgcgactgc 188 ||||||||||||||||||||| |||| Sbjct: 588 ctggttgcggctgcggctgcggctgc 613
>dbj|AK107110.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-123-A03, full insert sequence Length = 827 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 163 ctggttgcggctgcggctgcgactgc 188 ||||||||||||||||||||| |||| Sbjct: 587 ctggttgcggctgcggctgcggctgc 612
>gb|BC096488.1| Mus musculus PDZ domain containing 7, mRNA (cDNA clone IMAGE:6467125) Length = 2043 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcg 189 |||||||||||||||||||||| Sbjct: 577 tgcggctgcggctgcgactgcg 556
>gb|BC002781.2| Homo sapiens splicing factor, arginine/serine-rich 4, mRNA (cDNA clone MGC:3920 IMAGE:3619538), complete cds Length = 2158 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1213 gctgcggctgcgactgcgactg 1192
>dbj|AB209856.1| Homo sapiens mRNA for splicing factor, arginine/serine-rich 4 variant protein Length = 8245 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 7319 gctgcggctgcgactgcgactg 7298
>gb|L14076.1|HUMSRP75A Human pre-mRNA splicing factor SRp75 mRNA, complete cds Length = 2076 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgactg 193 |||||||||||||||||||||| Sbjct: 1163 gctgcggctgcgactgcgactg 1142
>ref|NM_106570.2| Arabidopsis thaliana unknown protein AT1G79190 mRNA, complete cds Length = 3879 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 tggagagaggacggaggagta 156 ||||||||||||||||||||| Sbjct: 197 tggagagaggacggaggagta 177
>gb|AY521575.1| Drosophila montana clone mon6 microsatellite sequence Length = 300 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcg 189 ||||||||||||||||||||| Sbjct: 195 gcggctgcggctgcgactgcg 215
>gb|AY303939.1| Pichia angusta global transcription activator Snf2p (SNF2) gene, complete cds Length = 5118 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgactggtg 196 ||||||||||| |||||||||| |||||| Sbjct: 519 tgcggctgcggttgcgactgcggctggtg 491
>gb|AC083849.6| Homo sapiens BAC clone RP11-163I18 from 7, complete sequence Length = 128611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 acaagagagggagagagttcc 129 ||||||||||||||||||||| Sbjct: 78753 acaagagagggagagagttcc 78733
>ref|XM_753087.1| Ustilago maydis 521 hypothetical protein (UM02033.1) partial mRNA Length = 2661 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 |||||||||||||||| |||||||| Sbjct: 2244 tgcggctgcggctgcggctgcgact 2220 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||||||||||||||| ||||| Sbjct: 2238 tgcggctgcggctgcgactacgact 2214
>ref|XM_753731.1| Ustilago maydis 521 hypothetical protein (UM02677.1) partial mRNA Length = 4407 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||||||||||||||| ||||| Sbjct: 709 tgcggctgcggctgcgactacgact 685
>ref|XM_753885.1| Ustilago maydis 521 hypothetical protein (UM02831.1) partial mRNA Length = 3474 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcgactg 193 ||||||| ||||| ||||||||||||||| Sbjct: 1313 ggttgcgactgcgactgcgactgcgactg 1285
>gb|AY974043.1| Zea mays inorganic phosphate transporter 3 mRNA, complete cds Length = 2096 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgactg 193 ||||||||| ||||||||||||||| Sbjct: 880 gcggctgcgactgcgactgcgactg 904
>emb|BX640473.9| Zebrafish DNA sequence from clone CH211-201F12 in linkage group 5, complete sequence Length = 193735 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 13458 tgcggctgcggctgcgactgc 13438
>tpg|BK003828.1| TPA: TPA_inf: Drosophila melanogaster HDC06590 (HDC06590) gene, complete cds Length = 5191 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 3341 tgcggctgcggctgcgactgc 3321
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgact 192 ||||||||||||||||||||| Sbjct: 28105 gctgcggctgcgactgcgact 28085
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 834754 tgcggctgcggctgcgactgc 834734
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||| ||||| Sbjct: 6065758 ggttgcggctgcggctgcggctgcg 6065734
>emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in linkage group 20, complete sequence Length = 176916 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||| ||||| Sbjct: 549 ggttgcggctgcggctgcggctgcg 525
>ref|XM_313644.2| Anopheles gambiae str. PEST ENSANGP00000012641 (ENSANGG00000010152), partial mRNA Length = 1413 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgact 192 ||||||| ||||||||||||||||| Sbjct: 670 tgcggctacggctgcgactgcgact 646
>gb|AC005378.2|AC005378 Homo sapiens PAC clone RP5-1137M13 from 7q33-q35, complete sequence Length = 129036 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 acaagagagggagagagttcc 129 ||||||||||||||||||||| Sbjct: 29485 acaagagagggagagagttcc 29505
>ref|NM_210710.1| Eremothecium gossypii AFL194Wp (AFL194W), mRNA Length = 3507 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 1256 tgcggctgcggctgcgactgc 1236
>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones BACR48C01 and DS08592, complete sequence Length = 192366 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 94124 tgcggctgcggctgcgactgc 94104
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgc 188 ||||||||||||||||||||| Sbjct: 171482 tgcggctgcggctgcgactgc 171462
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcg 189 ||||||||||||||||||| ||||| Sbjct: 314525 ggttgcggctgcggctgcggctgcg 314501
>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete sequence Length = 181925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 tggagagaggacggaggagta 156 ||||||||||||||||||||| Sbjct: 70779 tggagagaggacggaggagta 70799
>gb|U45859.1|ZMU45859 Zea mays glyceraldehyde-3-phosphate dehydrogenase (gpc4) gene, partial cds Length = 4627 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcg 189 ||||||||||||||||||||| Sbjct: 3059 gcggctgcggctgcgactgcg 3039
>ref|XM_636952.1| Dictyostelium discoideum hypothetical protein (DDB0204337), partial mRNA Length = 2553 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 gttttggatatgatgataggattt 566 ||||||||||||||||||| |||| Sbjct: 733 gttttggatatgatgatagaattt 710
>ref|NM_194031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 1141 gcggcagcggctgcgactgcgact 1118
>ref|NM_190771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 436 tttcctgcatataatgctgggtatgcaattct 467 ||||||||||| ||||| ||||| |||||||| Sbjct: 190 tttcctgcatacaatgcagggtacgcaattct 221
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgac 191 ||||||||||||| |||||||||| Sbjct: 116147 tgcggctgcggcttcgactgcgac 116170
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctgcggctgcgactgcgac 191 |||||||||||||||||||| Sbjct: 82812 gctgcggctgcgactgcgac 82793
>gb|AY735112.1| Streptomyces hygroscopicus mannopeptimycin biosynthetic gene cluster, complete sequence Length = 48200 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 cggctgcggctgcgactgcgactg 193 |||||||| ||||||||||||||| Sbjct: 32270 cggctgcgactgcgactgcgactg 32247
>gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosome 7, complete sequence Length = 195041 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 tgtgggcaaaaatctcatacacat 434 ||||||||||||||||| |||||| Sbjct: 185456 tgtgggcaaaaatctcagacacat 185433
>ref|NM_031922.2| Homo sapiens RALBP1 associated Eps domain containing 1 (REPS1), mRNA Length = 3565 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||||||||||||| |||||||| Sbjct: 354 gcggctgcggctgcggctgcgact 331
>ref|XM_841563.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.1470) partial mRNA Length = 1758 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgcgact 192 ||||||||||||||||||| ||| |||| Sbjct: 1625 ggttgcggctgcggctgcggctgtgact 1598
>ref|XM_754335.1| Ustilago maydis 521 hypothetical protein (UM03281.1) partial mRNA Length = 3612 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgactggtg 196 ||||||||| ||||||||||||| |||| Sbjct: 3232 gcggctgcgactgcgactgcgaccggtg 3259
>ref|XM_757557.1| Ustilago maydis 521 hypothetical protein (UM06503.1) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactg 187 |||||||||||||||||||| Sbjct: 245 tgcggctgcggctgcgactg 226
>ref|XM_850247.1| PREDICTED: Canis familiaris hypothetical LOC482662 (LOC482662), mRNA Length = 2286 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgac 191 |||||||||||||||| ||||||| Sbjct: 438 tgcggctgcggctgcggctgcgac 461
>ref|XM_385456.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05280.1) partial mRNA Length = 2025 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 tgcggctgcggctgcgactgcgac 191 ||||||| |||||||||||||||| Sbjct: 1798 tgcggctacggctgcgactgcgac 1775
>ref|XM_387079.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06903.1) partial mRNA Length = 6171 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 atctggtgtggtggaagactgatc 336 |||||||||||||||||| ||||| Sbjct: 2574 atctggtgtggtggaagagtgatc 2551
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ggcaaaaatctcatacacat 434 |||||||||||||||||||| Sbjct: 72199 ggcaaaaatctcatacacat 72180
>gb|AC129014.4| Mus musculus BAC clone RP24-317F20 from chromosome 19, complete sequence Length = 175855 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 35912 ctcccagcggagagaggacggagg 35889
>ref|XM_799236.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511877.20) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gttgcggctgcggctgcgactgcg 189 |||||||||||||||||| ||||| Sbjct: 961 gttgcggctgcggctgcggctgcg 984
>gb|AC126675.4| Mus musculus BAC clone RP23-430P11 from chromosome 19, complete sequence Length = 183462 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 166645 ctcccagcggagagaggacggagg 166622
>gb|BC035286.1| Homo sapiens RALBP1 associated Eps domain containing 1, mRNA (cDNA clone IMAGE:5184565), with apparent retained intron Length = 2797 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||||||||||||| |||||||| Sbjct: 304 gcggctgcggctgcggctgcgact 281
>ref|XM_807447.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509607.20) partial mRNA Length = 1755 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgc 188 ||||||||||||||||||| |||| Sbjct: 848 ggttgcggctgcggctgcggctgc 825
>ref|XM_814037.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053509753.140) partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 gttgcggctgcggctgcgactgcg 189 |||||||||||||||||| ||||| Sbjct: 943 gttgcggctgcggctgcggctgcg 966
>ref|XM_845414.1| PREDICTED: Canis familiaris similar to Forkhead box protein B2 (Transcription factor FKH-4) (LOC608385), mRNA Length = 1278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgc 188 |||||||||||||||||||| Sbjct: 640 gcggctgcggctgcgactgc 621
>gb|AC102609.7| Mus musculus, clone RP23-403I3, complete sequence Length = 208575 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tgggcaaaaatctcatacac 432 |||||||||||||||||||| Sbjct: 15901 tgggcaaaaatctcatacac 15920
>emb|AL590308.8| Human DNA sequence from clone RP11-501K14 on chromosome 6 Contains the 5' end of the REPS1 gene for RALBP1 associated Eps domain containing 1, the gene for hypothetical protein PRO2013 and two CpG islands, complete sequence Length = 100296 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgact 192 ||||||||||||||| |||||||| Sbjct: 20058 gcggctgcggctgcggctgcgact 20081
>gb|AC158956.6| Mus musculus chromosome 3, clone RP23-370F14, complete sequence Length = 174060 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tataatgctgggtatgcaat 464 |||||||||||||||||||| Sbjct: 75316 tataatgctgggtatgcaat 75297
>emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cosmid contig 123A4 Length = 153794 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ggttttggatatgatgatag 561 |||||||||||||||||||| Sbjct: 67466 ggttttggatatgatgatag 67485
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10, complete sequence Length = 105538 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 gttgcggctgcggctgcgactgcgactg 193 ||||| ||||| |||||||||||||||| Sbjct: 25860 gttgctgctgctgctgcgactgcgactg 25887
>gb|AC158132.6| Mus musculus chromosome 1, clone RP23-11K8, complete sequence Length = 231218 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgggcaaaaatctcatacac 432 |||||||||||||||||||| Sbjct: 31874 tgggcaaaaatctcatacac 31855
>emb|BX510938.11| Zebrafish DNA sequence from clone DKEY-92K1 in linkage group 21, complete sequence Length = 230957 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 gtggatttcatttctgcccttctt 217 |||||||||||||||| ||||||| Sbjct: 149613 gtggatttcatttctggccttctt 149590
>tpg|BK003270.1| TPA: TPA_inf: Drosophila melanogaster HDC00218 (HDC00218) gene, complete cds Length = 3342 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctgcggctgcgactgcgact 192 |||||||||||||||||||| Sbjct: 102 ctgcggctgcgactgcgact 83
>gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, complete sequence Length = 180504 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcttctgcatctttgtgggc 417 |||||||||||||||||||| Sbjct: 35240 tcttctgcatctttgtgggc 35221
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 gttgcggctgcggctgcgactgcgactg 193 ||||| |||||| ||||||||||||||| Sbjct: 979920 gttgctgctgcgactgcgactgcgactg 979893
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 100087 gcggcagcggctgcgactgcgact 100064
>gb|AC099497.2| Homo sapiens chromosome 5 clone RP11-139A10, complete sequence Length = 165884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctggtggatttcatttctgc 210 |||||||||||||||||||| Sbjct: 53472 ctggtggatttcatttctgc 53491
>dbj|AK052621.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630006L24 product:unclassifiable, full insert sequence Length = 1106 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 544 ctcccagcggagagaggacggagg 521
>dbj|AK039403.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330040F15 product:unclassifiable, full insert sequence Length = 1921 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 498 ctcccagcggagagaggacggagg 475
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctgcggctgcgactgcgact 192 |||||||||||||||||||| Sbjct: 108322 ctgcggctgcgactgcgact 108303
>dbj|AK044899.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130010N12 product:RIKEN cDNA 4122401K19 gene, full insert sequence Length = 1865 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 276 ctcccagcggagagaggacggagg 299
>dbj|AK014465.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401K19 product:unclassifiable, full insert sequence Length = 2527 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctcccagtggagagaggacggagg 152 ||||||| |||||||||||||||| Sbjct: 271 ctcccagcggagagaggacggagg 294
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 gttgcggctgcggctgcgactgcgactg 193 ||||| ||||| |||||||||||||||| Sbjct: 713720 gttgctgctgctgctgcgactgcgactg 713747
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 11516094 gcggcagcggctgcgactgcgact 11516071
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 22023149 gcggcagcggctgcgactgcgact 22023172
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgac 191 ||||||||||||| |||||||||| Sbjct: 17172012 tgcggctgcggcttcgactgcgac 17172035
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 436 tttcctgcatataatgctgggtatgcaattct 467 ||||||||||| ||||| ||||| |||||||| Sbjct: 37613890 tttcctgcatacaatgcagggtacgcaattct 37613859 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 14866599 gcggcagcggctgcgactgcgact 14866576
>gb|AC099554.2| Homo sapiens chromosome 5 clone RP11-61G23, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctggtggatttcatttctgc 210 |||||||||||||||||||| Sbjct: 23483 ctggtggatttcatttctgc 23502
>gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complete sequence Length = 120590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cctcccagtggagagaggac 147 |||||||||||||||||||| Sbjct: 76407 cctcccagtggagagaggac 76426
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 436 tttcctgcatataatgctgggtatgcaattct 467 ||||||||||| ||||| ||||| |||||||| Sbjct: 74364 tttcctgcatacaatgcagggtacgcaattct 74333
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 catggccaagcagctgcggg 283 |||||||||||||||||||| Sbjct: 3575410 catggccaagcagctgcggg 3575391
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697D09 Length = 158479 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 51425 gcggcagcggctgcgactgcgact 51402
>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503E05 Length = 168258 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 102643 gcggcagcggctgcgactgcgact 102620
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 65213 gcggcagcggctgcgactgcgact 65236
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ggcaaaaatctcatacacat 434 |||||||||||||||||||| Sbjct: 90627 ggcaaaaatctcatacacat 90646
>dbj|AK119393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-D02, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 436 tttcctgcatataatgctgggtatgcaattct 467 ||||||||||| ||||| ||||| |||||||| Sbjct: 381 tttcctgcatacaatgcagggtacgcaattct 412
>dbj|AK073380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029I23, full insert sequence Length = 901 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcggctgcggctgcgactgcgac 191 ||||||||||||| |||||||||| Sbjct: 467 tgcggctgcggcttcgactgcgac 490
>dbj|AK067216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098P16, full insert sequence Length = 1933 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 436 tttcctgcatataatgctgggtatgcaattct 467 ||||||||||| ||||| ||||| |||||||| Sbjct: 387 tttcctgcatacaatgcagggtacgcaattct 418
>gb|AE003586.3| Drosophila melanogaster chromosome 2L, section 5 of 83 of the complete sequence Length = 306696 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctgcggctgcgactgcgact 192 |||||||||||||||||||| Sbjct: 181193 ctgcggctgcgactgcgact 181174
>emb|AM087943.1| Aegilops tauschii mRNA for putative avenin-like a precursor (avenin-like a1 gene) Length = 597 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgc 188 ||||||||||||||||||| |||| Sbjct: 176 ggttgcggctgcggctgcggctgc 153
>emb|AM087942.1| Aegilops cylindrica mRNA for putative avenin-like a precursor (avenin-like a1 gene) Length = 597 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 ggttgcggctgcggctgcgactgc 188 ||||||||||||||||||| |||| Sbjct: 176 ggttgcggctgcggctgcggctgc 153
>dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-686G23, complete sequences Length = 177933 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tcttctgcatctttgtgggc 417 |||||||||||||||||||| Sbjct: 82054 tcttctgcatctttgtgggc 82073
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||| |||||||||||||||||| Sbjct: 11522534 gcggcagcggctgcgactgcgact 11522511
>emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060M15, complete sequence Length = 119918 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 gttgcggctgcggctgcgactgcgactg 193 ||||| ||||| |||||||||||||||| Sbjct: 104592 gttgctgctgctgctgcgactgcgactg 104619
>gb|BC012764.2| Homo sapiens RALBP1 associated Eps domain containing 1, mRNA (cDNA clone MGC:16228 IMAGE:3677286), complete cds Length = 3211 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||||||||||||| |||||||| Sbjct: 354 gcggctgcggctgcggctgcgact 331
>gb|AC003121.1|AC003121 Drosophila melanogaster (P1 DS00329 (D89)) DNA sequence, complete sequence Length = 69822 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctgcggctgcgactgcgact 192 |||||||||||||||||||| Sbjct: 30665 ctgcggctgcgactgcgact 30684
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ttgtcttctgcatctttgtg 414 |||||||||||||||||||| Sbjct: 131584 ttgtcttctgcatctttgtg 131603
>dbj|AB209143.1| Homo sapiens mRNA for RalBP1 associated Eps domain containing protein 1 variant protein Length = 6069 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gcggctgcggctgcgactgcgact 192 ||||||||||||||| |||||||| Sbjct: 94 gcggctgcggctgcggctgcgact 71
>gb|M20917.1|KPNMFIMB K.pneumoniae major fimbrial subunit (fim) gene, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ataatctggtgtggtggaag 329 |||||||||||||||||||| Sbjct: 248 ataatctggtgtggtggaag 229 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,011,519 Number of Sequences: 3902068 Number of extensions: 5011519 Number of successful extensions: 146485 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145322 Number of HSP's gapped (non-prelim): 1124 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
