ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal20e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009270.1| Triticum aestivum clone wlk8.pk0008.g5:fis, full insert mRNA sequence Length = 788 Score = 831 bits (419), Expect = 0.0 Identities = 485/507 (95%) Strand = Plus / Plus Query: 107 gagctatggaacgagattgggttgcagaccgccatggggcagatgctggacctcatcacc 166 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 gagctctggaacgagattgggttgcagaccgccatggggcagatgctggacctcatcacc 81 Query: 167 acccacaccggcgccaaggatctcgccagatacaggatccaagggtaccgccgcattgtc 226 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 82 acccacaccggcgccaaggacctcgccagatacaggatccaagggtaccgccgtattgtc 141 Query: 227 aagtacaagacgtcctactactccttctacctgccggttgcctgcgcgctgctcttgaat 286 |||||||| || |||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 142 aagtacaaaacatcctactattccttctacctgccggttgcttgtgcattgctcttgaat 201 Query: 287 ggcgcgaagctgagcgactacgtcgagctgaaaaatgtactgattgagatgggagtctac 346 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 202 ggcgcgaaactgagcgactacgtcgagctcaaaaatgtactgattgagatgggagtctac 261 Query: 347 tttcagatacaggatgactacctggattgcttcggtgaccctcaagttattggcaaggtt 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 262 tttcagatacaggatgactacctggattgcttcggcgaccctcaagttattggcaaggtt 321 Query: 407 ggaacagacatagaagactacaagtgctcctggctaattgtccaggctatggaactggct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 ggaacagacatagaagactacaagtgctcctggctaattgtccaggctatggaactggct 381 Query: 467 aacgagaacgagatgaaaatactatacgagaactatggcaagtcttccccagaatgtgtc 526 || ||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 382 aatgagaatgagatgaaaatactatacgaaaactatggcaagtcttgcccggaatgtgtt 441 Query: 527 ggagcagtgaagaatgtttataaggagcttgatcttcaggacatattcttggagtacgag 586 | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gcagcagtgaaaaatgtttacaaggagcttgatcttcaggacatattcttggagtacgag 501 Query: 587 tcaagagtttacaagcacctggtttca 613 ||||||||||||||||||||||||||| Sbjct: 502 tcaagagtttacaagcacctggtttca 528
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 644 bits (325), Expect = 0.0 Identities = 532/601 (88%) Strand = Plus / Plus Query: 12 tgtctgcgataaacgacggtgtgctcctgaaatgccacgtccaggccatcatcaagcgct 71 ||||||| |||||||| |||||||| || || ||||| |||||||| ||||||||| | | Sbjct: 542 tgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagagat 601 Query: 72 acttcaaggagaagttctacttcatggagctcatggagctatggaacgagattgggttgc 131 ||||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| Sbjct: 602 acttcaaggagaagttctacttcctggacctcatggagctatggaacgagataggcttgc 661 Query: 132 agaccgccatggggcagatgctggacctcatcaccacccacaccggcgccaaggatctcg 191 |||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 662 agactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggatctcg 721 Query: 192 ccagatacaggatccaagggtaccgccgcattgtcaagtacaagacgtcctactactcct 251 |||||||||| || || |||||||| |||||||||||||||||||| || ||||| || | Sbjct: 722 ccagatacagaattcaggggtaccgtcgcattgtcaagtacaagacatcatactattcgt 781 Query: 252 tctacctgccggttgcctgcgcgctgctcttgaatggcgcgaagctgagcgactacgtcg 311 |||||||||||||||| || || | |||||||||||||||| |||| ||||| || | Sbjct: 782 tctacctgccggttgcatgtgcattactcttgaatggcgcgagattgagtgactatgttg 841 Query: 312 agctgaaaaatgtactgattgagatgggagtctactttcagatacaggatgactacctgg 371 |||||||||||||||| || || ||||| || |||||||||||||||||||||||| ||| Sbjct: 842 agctgaaaaatgtacttatcgaaatgggcgtatactttcagatacaggatgactacttgg 901 Query: 372 attgcttcggtgaccctcaagttattggcaaggttggaacagacatagaagactacaagt 431 ||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 902 attgctttggtgacccagaagtgattggcaaggttggaacagacattgaagactacaagt 961 Query: 432 gctcctggctaattgtccaggctatggaactggctaacgagaacgagatgaaaatactat 491 | ||||||||||| || |||||||||||||| || || ||||| |||||||||||||||| Sbjct: 962 gttcctggctaatagtacaggctatggaactcgccaatgagaatgagatgaaaatactat 1021 Query: 492 acgagaactatggcaagtcttccccagaatgtgtcggagcagtgaagaatgtttataagg 551 | |||||||| || |||||| |||| |||| || | || |||||||| ||||| | || Sbjct: 1022 atgagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacaggg 1081 Query: 552 agcttgatcttcaggacatattcttggagtacgagtcaagagtttacaagcacctggttt 611 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1082 agcttgatcttcaggacatatttttggagtacgagtcaagagtttacaagcacctggttt 1141 Query: 612 c 612 | Sbjct: 1142 c 1142
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 12 tgtctgcgataaacgacggtgtgctcctgaaatgccacgtccaggccatcatcaagcgct 71 ||||||| |||||||| |||||||| || || ||||| |||||||| ||||||||| | | Sbjct: 33560335 tgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagagat 33560276 Query: 72 acttcaaggagaagttctacttcatggagctcatggagctatggaacgag 121 ||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 33560275 acttcaaggagaagttctacttcctggacctcatggagctatggaacgag 33560226 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 402 aggttggaacagacatagaagactacaagtgctcctggctaattgtccaggctatggaac 461 |||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 33559496 aggttggaacagacattgaagactacaagtgttcctggctaatagtacaggctatggaac 33559437 Query: 462 tggctaacgagaacgagatgaaaatactata 492 | || || ||||| ||||||||||||||||| Sbjct: 33559436 tcgccaatgagaatgagatgaaaatactata 33559406 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 128 ttgcagaccgccatggggcagatgctggacctcatcaccacccacaccggcgccaaggat 187 |||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 33560126 ttgcagactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggat 33560067 Query: 188 ctcgccagatacag 201 |||||||||||||| Sbjct: 33560066 ctcgccagatacag 33560053 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 564 aggacatattcttggagtacgagtcaagagtttacaagcacctggtttc 612 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33559025 aggacatatttttggagtacgagtcaagagtttacaagcacctggtttc 33558977 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 278 ctcttgaatggcgcgaagctgagcgactacgtcgagctgaaaaatgtactgattgagatg 337 |||||||||||||||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 33559773 ctcttgaatggcgcgagattgagtgactatgttgagctgaaaaatgtacttatcgaaatg 33559714 Query: 338 ggagtctactttcagatacagg 359 || || |||||||||||||||| Sbjct: 33559713 ggcgtatactttcagatacagg 33559692 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 210 ggtaccgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||| |||||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 33559957 ggtaccgtcgcattgtcaagtacaagacatcatactattcgttctacctgccggt 33559903 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggt 405 |||||||||||| |||||||||| |||||||| |||| ||||||||||| Sbjct: 33559621 caggatgactacttggattgctttggtgacccagaagtgattggcaaggt 33559572 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 212 taccgccgcattgtcaagtacaagacgtcctactactccttctacct 258 ||||| |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 33552295 taccgtcgcattgttaagtacaagacagcgtactactccttttacct 33552249 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 494 gagaactatggcaagtcttccccagaatgtgtcggagcagtgaagaatgtttataaggag 553 |||||||| || |||||| |||| |||| || | || |||||||| ||||| | |||| Sbjct: 33559286 gagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacagggag 33559227 Query: 554 cttgatcttcagg 566 ||||||||||||| Sbjct: 33559226 cttgatcttcagg 33559214
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 12 tgtctgcgataaacgacggtgtgctcctgaaatgccacgtccaggccatcatcaagcgct 71 ||||||| |||||||| |||||||| || || ||||| |||||||| ||||||||| | | Sbjct: 136624 tgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagagat 136565 Query: 72 acttcaaggagaagttctacttcatggagctcatggagctatggaacgag 121 ||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 136564 acttcaaggagaagttctacttcctggacctcatggagctatggaacgag 136515 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 402 aggttggaacagacatagaagactacaagtgctcctggctaattgtccaggctatggaac 461 |||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 135785 aggttggaacagacattgaagactacaagtgttcctggctaatagtacaggctatggaac 135726 Query: 462 tggctaacgagaacgagatgaaaatactata 492 | || || ||||| ||||||||||||||||| Sbjct: 135725 tcgccaatgagaatgagatgaaaatactata 135695 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 128 ttgcagaccgccatggggcagatgctggacctcatcaccacccacaccggcgccaaggat 187 |||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 136415 ttgcagactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggat 136356 Query: 188 ctcgccagatacag 201 |||||||||||||| Sbjct: 136355 ctcgccagatacag 136342 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Minus Query: 564 aggacatattcttggagtacgagtcaagagtttacaagcacctggtttc 612 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135314 aggacatatttttggagtacgagtcaagagtttacaagcacctggtttc 135266 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 278 ctcttgaatggcgcgaagctgagcgactacgtcgagctgaaaaatgtactgattgagatg 337 |||||||||||||||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 136062 ctcttgaatggcgcgagattgagtgactatgttgagctgaaaaatgtacttatcgaaatg 136003 Query: 338 ggagtctactttcagatacagg 359 || || |||||||||||||||| Sbjct: 136002 ggcgtatactttcagatacagg 135981 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 210 ggtaccgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||| |||||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 136246 ggtaccgtcgcattgtcaagtacaagacatcatactattcgttctacctgccggt 136192 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggt 405 |||||||||||| |||||||||| |||||||| |||| ||||||||||| Sbjct: 135910 caggatgactacttggattgctttggtgacccagaagtgattggcaaggt 135861 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 212 taccgccgcattgtcaagtacaagacgtcctactactccttctacct 258 ||||| |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 128584 taccgtcgcattgttaagtacaagacagcgtactactccttttacct 128538 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 494 gagaactatggcaagtcttccccagaatgtgtcggagcagtgaagaatgtttataaggag 553 |||||||| || |||||| |||| |||| || | || |||||||| ||||| | |||| Sbjct: 135575 gagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacagggag 135516 Query: 554 cttgatcttcagg 566 ||||||||||||| Sbjct: 135515 cttgatcttcagg 135503
>ref|XM_695422.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC571794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 332 gagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccct 388 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 812 gagatgggagagttctttcagatacaggatgactacctggattgctttggtgaccct 868
>ref|XM_682059.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC558794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 332 gagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccct 388 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 812 gagatgggagagttctttcagatacaggatgactacctggattgctttggtgaccct 868
>gb|BC083515.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone IMAGE:7049076), partial cds Length = 2029 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 332 gagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccct 388 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 718 gagatgggagagttctttcagatacaggatgactacctggattgctttggtgaccct 774
>gb|BC097112.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:114048 IMAGE:7417512), complete cds Length = 1836 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 332 gagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccct 388 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 gagatgggagagttctttcagatacaggatgactacctggattgctttggtgaccct 843
>ref|NM_001025471.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (fdps), mRNA Length = 1836 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 332 gagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccct 388 |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 gagatgggagagttctttcagatacaggatgactacctggattgctttggtgaccct 843
>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds Length = 1378 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | |||||| ||| || |||| |||||| ||||||| ||| Sbjct: 811 caggatgactatctggattgttacggtgatcctgaatttatcggcaagattggaacggac 870 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 871 attgaagattacaagtgctcatggctagttgt 902
>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence Length = 1469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | ||||| ||| || |||| |||||| ||||||| ||| Sbjct: 855 caggatgactatctggattgttatggtgatcctgaatttatcggcaagattggaacggac 914 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 915 attgaagattacaagtgctcatggctagttgt 946
>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence Length = 1208 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | ||||| ||| || |||| |||||| ||||||| ||| Sbjct: 616 caggatgactatctggattgttatggtgatcctgaatttatcggcaagattggaacggac 675 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 676 attgaagattacaagtgctcatggctagttgt 707
>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA, partial cds Length = 1250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | ||||| ||| || |||| |||||| ||||||| ||| Sbjct: 688 caggatgactatctggattgttatggtgatcctgaatttatcggcaagattggaacggac 747 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 748 attgaagattacaagtgctcatggctagttgt 779
>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds Length = 1399 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | ||||| ||| || |||| |||||| ||||||| ||| Sbjct: 837 caggatgactatctggattgttatggtgatcctgaatttatcggcaagattggaacggac 896 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 897 attgaagattacaagtgctcatggctagttgt 928
>gb|AY108110.1| Zea mays PCO074380 mRNA sequence Length = 1453 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| |||||||| | ||||| ||| || |||| |||||| ||||||| ||| Sbjct: 837 caggatgactatctggattgttatggtgatcctgaatttatcggcaagattggaacggac 896 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||| ||||||||||| |||||| |||| Sbjct: 897 attgaagattacaagtgctcatggctagttgt 928
>ref|XM_363065.1| Magnaporthe grisea 70-15 hypothetical protein (MG08649.4) partial cds Length = 1047 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 211 gtaccgccgcattgtcaagtacaagacgtcctactactccttctacctgccggttgcc 268 ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||| Sbjct: 555 gtaccgcttcattgtcatctacaagacggcctactactccttctacctgcccgttgcc 612
>gb|AY110411.1| Zea mays CL242_1 mRNA sequence Length = 2504 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 ||||||||||| || ||||| || ||||| ||| || | ||||||||| | ||||| ||| Sbjct: 838 caggatgactatctagattgttttggtgatcctgaattcattggcaagatcggaactgac 897 Query: 416 atagaagactacaagtgctcctggctaattgt 447 || ||||||||||| || ||||||||| |||| Sbjct: 898 attgaagactacaaatgttcctggctagttgt 929
>ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 393 ttattggcaaggttggaacagacatagaagactacaagtgctc 435 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 761 ttattggcaagattggaacggacattgaagactacaagtgctc 803 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggttgc 267 ||||||||||||| |||||||||| | |||||||| ||||| || |||||||| Sbjct: 581 accgccgcattgttcagtacaagacagcttactactcattctatcttccggttgc 635
>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full insert sequence Length = 1332 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 393 ttattggcaaggttggaacagacatagaagactacaagtgctc 435 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 845 ttattggcaagattggaacggacattgaagactacaagtgctc 887 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggttgc 267 ||||||||||||| |||||||||| | |||||||| ||||| || |||||||| Sbjct: 665 accgccgcattgttcagtacaagacagcttactactcattctatcttccggttgc 719
>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl pyrophosphate synthase, complete cds Length = 1289 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 393 ttattggcaaggttggaacagacatagaagactacaagtgctc 435 ||||||||||| ||||||| ||||| ||||||||||||||||| Sbjct: 802 ttattggcaagattggaacggacattgaagactacaagtgctc 844 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggttgc 267 ||||||||||||| |||||||||| | |||||||| ||||| || |||||||| Sbjct: 622 accgccgcattgttcagtacaagacagcttactactcattctatcttccggttgc 676
>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA sequence Length = 1301 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 394 tattggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||||| ||||||| ||||| |||||||||||||| |||||| Sbjct: 813 tattggcaagattggaactgacattgaagactacaagtgttcctgg 858
>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16, complete sequence Length = 173571 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 355 acaggatgactacctggattgcttcggtgaccct 388 |||||||||||||||||||||||| ||||||||| Sbjct: 95939 acaggatgactacctggattgctttggtgaccct 95906
>gb|AY966012.1| Vitis vinifera farnesyl diphosphate synthase mRNA, complete cds Length = 1026 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 335 atgggagtctactttcagatacaggatgactacctggattgcttcggtgaccctcaagtt 394 |||||| |||| ||||| |||||||||| || |||||||| ||||||||||| ||||| Sbjct: 667 atgggaatctattttcaagtacaggatgattatctggattgtttcggtgacccccaagtg 726 Query: 395 attgg 399 ||||| Sbjct: 727 attgg 731
>gb|AF390138.1|AF390138 X Citrofortunella microcarpa farnesyldiphosphate synthase (FPS1) mRNA, complete cds Length = 1392 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 390 aagttattggcaaggttggaacagacatagaagactacaagtg 432 |||||||||||||||||||||| || || ||||| |||||||| Sbjct: 824 aagttattggcaaggttggaactgatattgaagattacaagtg 866
>gb|AF384040.1|AF384040 Mentha x piperita farnesyl diphosphate synthase mRNA, complete cds Length = 1427 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 335 atgggagtctactttcagatacaggatgactacctggattgcttcggtga 384 |||||| | |||||||| |||||||||||||| | |||||||||||||| Sbjct: 789 atgggaatatactttcaagtacaggatgactacttagattgcttcggtga 838 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 215 cgccgcattgtcaagtacaagacgtcctactactccttctacctgccggttgc 267 ||||||||||| |||||||||| |||||||||| || ||||| || ||||| Sbjct: 669 cgccgcattgttcagtacaagactgcctactactcattttaccttccagttgc 721
>gb|AF164026.1|AF164026 Xanthoceras sorbifolium farnesyl pyrophosphate synthase (FPS) mRNA, partial cds Length = 449 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 330 ttgagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccctc 389 |||| |||||| |||| ||||| |||||||||| || |||||||| || |||| || Sbjct: 85 ttgacatgggaatctattttcaagtacaggatgattatctggattgttttggtgctcccg 144 Query: 390 aagttattggcaaggttggaacagacatagaagactacaagtgctc 435 |||| ||||| ||||||||||| || || ||||| | ||||||||| Sbjct: 145 aagtgattggtaaggttggaactgatattgaagatttcaagtgctc 190
>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence Length = 168853 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 137658 attgtcaagtacaagacggctttctactctttctacctgcc 137618
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence Length = 218929 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 88714 attgtcaagtacaagacggctttctactctttctacctgcc 88674
>emb|CT010365.1| Mus musculus full open reading frame cDNA clone RZPDo836B0753D for gene Fdps, Farnesyl diphosphate synthetase; complete cds, incl. stopcodon Length = 1062 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 586 attgtcaagtacaagacggctttctactctttctacctgcc 626
>emb|Y12072.1|CAFPS1 G.arboreum mRNA for farnesyl pyrophosphate synthase Length = 1286 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 330 ttgagatgggagtctactttcagatacaggatgactacctggattgctt 378 |||| |||||| |||||||||| ||||||||||||| |||||||||| Sbjct: 759 ttgacatgggaatctactttcaagtacaggatgactatttggattgctt 807
>emb|X82543.1|PAFPS2 P.argentatum mRNA for farnesyl diphosphate synthase (FPS2) Length = 1233 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 395 attggcaaggttggaacagacatagaagactacaagtgctcctggctaattgt 447 ||||| ||| ||||||||||||| ||||||| |||||||| |||||| |||| Sbjct: 758 attggaaagattggaacagacattgaagactttaagtgctcgtggctagttgt 810
>gb|AF309508.1| Mus musculus farnesyl pyrophosphate synthase (Fpps) mRNA, complete cds Length = 1168 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 619 attgtcaagtacaagacggctttctactctttctacctgcc 659
>dbj|AK140881.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130055P22 product:farnesyl diphosphate synthetase, full insert sequence Length = 1233 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 706 attgtcaagtacaagacggctttctactctttctacctgcc 746
>dbj|AK151742.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830036A06 product:farnesyl diphosphate synthetase, full insert sequence Length = 1170 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 643 attgtcaagtacaagacggctttctactctttctacctgcc 683
>dbj|AK168008.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730046O10 product:farnesyl diphosphate synthetase, full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 633 attgtcaagtacaagacggctttctactctttctacctgcc 673
>dbj|AK166026.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730029L22 product:farnesyl diphosphate synthetase, full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 633 attgtcaagtacaagacggctttctactctttctacctgcc 673
>dbj|AK088601.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021D19 product:FARNESYL PYROPHOSPHATE SYNTHASE (EC 2.5.1.10), full insert sequence Length = 1160 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 634 attgtcaagtacaagacggctttctactctttctacctgcc 674
>gb|BC087886.1| Mus musculus farnesyl diphosphate synthetase, mRNA (cDNA clone MGC:107162 IMAGE:6595030), complete cds Length = 1199 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 637 attgtcaagtacaagacggctttctactctttctacctgcc 677
>gb|BC048497.1| Mus musculus farnesyl diphosphate synthetase, mRNA (cDNA clone MGC:58339 IMAGE:6531586), complete cds Length = 1252 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 692 attgtcaagtacaagacggctttctactctttctacctgcc 732
>ref|NM_134469.2| Mus musculus farnesyl diphosphate synthetase (Fdps), mRNA Length = 1252 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 692 attgtcaagtacaagacggctttctactctttctacctgcc 732
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence Length = 220201 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 |||||||||||||||||| | | |||||| ||||||||||| Sbjct: 183351 attgtcaagtacaagacggctttctactctttctacctgcc 183311
>ref|XM_474180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 347 tttcagatacaggatgactacctggattgcttcggtgaccctcaagttattggcaaggtt 406 ||||||||||||||||||||| |||| || || | ||||||| | || |||||| || Sbjct: 913 tttcagatacaggatgactacttggactgttttgctgaccctaacaccataggcaagatt 972 Query: 407 ggaacagacatagaagactacaagtgctcctggctaattgtccaggct 454 ||||| ||||| ||||| | ||||| |||||| |||| || |||||| Sbjct: 973 ggaactgacatcgaagatcataagtgttcctggttaatagtacaggct 1020 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 207 aagggtaccgccgcattgtcaagtacaagacgtcctactactccttctacct 258 |||| ||||| |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 773 aaggctaccgtcgcattgttaagtacaagacagcgtactactccttttacct 824
>ref|XM_956448.1| Neurospora crassa OR74A FARNESYL PYROPHOSPHATE SYNTHETASE (FPP SYNTHETASE) (FPS) (FARNESYL DIPHOSPHATE SYNTHETASE) [INCLUDES: DIMETHYLALLYLTRANSFERASE > (NCU01175.1) partial mRNA Length = 1044 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 tacaagacgtcctactactccttctacctgcc 261 ||||||||| |||||||||| ||||||||||| Sbjct: 571 tacaagacggcctactactcgttctacctgcc 602
>ref|XM_326667.1| Neurospora crassa OR74A FARNESYL PYROPHOSPHATE SYNTHETASE (FPP SYNTHETASE) (FPS) (FARNESYL DIPHOSPHATE SYNTHETASE) [INCLUDES: DIMETHYLALLYLTRANSFERASE > (NCU01175.1) partial mRNA Length = 1044 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 tacaagacgtcctactactccttctacctgcc 261 ||||||||| |||||||||| ||||||||||| Sbjct: 571 tacaagacggcctactactcgttctacctgcc 602
>emb|X96944.1|NCFPPSGEN Neurospora crassa FPPS gene for farnesyl pyrophosphate synthetase, strain Oak ridge 74-OR23A Length = 2034 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 tacaagacgtcctactactccttctacctgcc 261 ||||||||| |||||||||| ||||||||||| Sbjct: 1144 tacaagacggcctactactcgttctacctgcc 1175
>emb|X96942.1|CPFPPSGEN Claviceps purpurea partial FPPS gene for farnesyl pyrophosphate synthetase Length = 635 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 230 tacaagacgtcctactactccttctacctgcc 261 ||||||||| ||||||||||||| |||||||| Sbjct: 430 tacaagacggcctactactccttttacctgcc 461
>emb|X82542.1|PAFPS1 P.argentatum mRNA for farnesyl diphosphate synthase (FPS1) Length = 1283 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 392 gttattggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| ||| ||||||||||||| ||||||| ||||| |||||| Sbjct: 780 gttattggaaagattggaacagacattgaagactttaagtgttcctgg 827
>emb|AL670009.1|NC123A4 Neurospora crassa DNA linkage group V cosmid contig 123A4 Length = 153794 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 230 tacaagacgtcctactactccttctacctgcc 261 ||||||||| |||||||||| ||||||||||| Sbjct: 11868 tacaagacggcctactactcgttctacctgcc 11837
>gb|DQ059550.1| Panax notoginseng farnesyl pyrophosphate synthase mRNA, complete cds Length = 1409 Score = 48.1 bits (24), Expect = 0.034 Identities = 69/84 (82%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 |||||||| || ||||||||||| |||| ||| | || ||||| ||| |||| ||||| Sbjct: 823 caggatgattatctggattgctttggtgcacctgaggtgattggaaagattggcacagat 882 Query: 416 atagaagactacaagtgctcctgg 439 || ||||| | ||||||||||||| Sbjct: 883 attgaagatttcaagtgctcctgg 906
>dbj|AK072747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023137P20, full insert sequence Length = 1367 Score = 48.1 bits (24), Expect = 0.034 Identities = 87/108 (80%) Strand = Plus / Plus Query: 347 tttcagatacaggatgactacctggattgcttcggtgaccctcaagttattggcaaggtt 406 ||||||||||||||||||||| |||| || || | ||||||| | || |||||| || Sbjct: 917 tttcagatacaggatgactacttggactgttttgctgaccctaacaccataggcaagatt 976 Query: 407 ggaacagacatagaagactacaagtgctcctggctaattgtccaggct 454 ||||| ||||| ||||| | ||||| |||||| |||| || |||||| Sbjct: 977 ggaactgacatcgaagatcataagtgttcctggttaatagtacaggct 1024 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 207 aagggtaccgccgcattgtcaagtacaagacgtcctactactccttctacct 258 |||| ||||| |||||||| ||||||||||| | ||||||||||| ||||| Sbjct: 777 aaggctaccgtcgcattgttaagtacaagacagcgtactactccttttacct 828
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 405 ttggaacagacatagaagactacaagtgctc 435 ||||||| ||||| ||||||||||||||||| Sbjct: 29155003 ttggaacggacattgaagactacaagtgctc 29155033 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||||||||| |||||||||| | |||||||| ||||| || ||||| Sbjct: 29154512 accgccgcattgttcagtacaagacagcttactactcattctatcttccggt 29154563 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccacccacaccggcgccaag 184 |||||||||||||||||||| Sbjct: 6395996 ccacccacaccggcgccaag 6395977
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 405 ttggaacagacatagaagactacaagtgctc 435 ||||||| ||||| ||||||||||||||||| Sbjct: 115369 ttggaacggacattgaagactacaagtgctc 115399 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||||||||| |||||||||| | |||||||| ||||| || ||||| Sbjct: 114878 accgccgcattgttcagtacaagacagcttactactcattctatcttccggt 114929
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 405 ttggaacagacatagaagactacaagtgctc 435 ||||||| ||||| ||||||||||||||||| Sbjct: 790 ttggaacggacattgaagactacaagtgctc 820 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||||||||| |||||||||| | |||||||| ||||| || ||||| Sbjct: 299 accgccgcattgttcagtacaagacagcttactactcattctatcttccggt 350
>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl diphosphate synthase, complete cds Length = 7423 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 405 ttggaacagacatagaagactacaagtgctc 435 ||||||| ||||| ||||||||||||||||| Sbjct: 5307 ttggaacggacattgaagactacaagtgctc 5337 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 213 accgccgcattgtcaagtacaagacgtcctactactccttctacctgccggt 264 ||||||||||||| |||||||||| | |||||||| ||||| || ||||| Sbjct: 4815 accgccgcattgttcagtacaagacagcttactactcattctatcttccggt 4866
>ref|NM_192180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Plus Query: 330 ttgagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccctc 389 |||||||||| || |||||||| | |||||||| || ||||| || || ||||| || Sbjct: 692 ttgagatgggtgtttactttcaaagccaggatgattatctggactgttttggtgaaccag 751 Query: 390 aagttattggcaaggttggaacagacatagaagactacaagtgctcctggctaattgt 447 || ||||||||||| | |||| ||||| ||||| | |||||| || |||||| |||| Sbjct: 752 aaattattggcaagataggaagtgacattgaagatttcaagtgttcttggctatttgt 809
>ref|XM_513857.1| PREDICTED: Pan troglodytes LOC457366 (LOC457366), mRNA Length = 5256 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 1081 attgtcaagtacaagacagctttctactccttctacct 1118
>ref|NM_002004.2| Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS), mRNA Length = 1345 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 792 attgtcaagtacaagacagctttctactccttctacct 829
>ref|XM_386960.1| Gibberella zeae PH-1 chromosome 4 FPPS_GIBFU Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (FG06784.1) partial mRNA Length = 1044 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 230 tacaagacgtcctactactccttctacctgccggttgc 267 |||||||| ||||||||||||||||||| || ||||| Sbjct: 571 tacaagaccgcctactactccttctacctccctgttgc 608
>ref|XM_537252.2| PREDICTED: Canis familiaris similar to farnesyl diphosphate synthase (LOC480129), mRNA Length = 1306 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||| |||||| ||| |||||| |||||||| Sbjct: 787 attgtcaagtataagacggccttctactcattctacct 824
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a novel pseudogene, a farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end of a solute carrier family 4 (anion exchanger) member 1 adaptor protein (SLC4A1AP) pseudogene, complete sequence Length = 190912 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 45617 attgtcaagtacaagacagctttctactccttctacct 45654
>emb|AL139410.20| Human DNA sequence from clone RP11-21N7 on chromosome 1 Contains the FDPS gene for farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), two novel genes, the gene for a novel protein (FLJ35976), the RUSC1 gene for RUN and SH3 domain containing 1, the 3' end of the ASH1L gene for ash1 (absent, small, or homeotic)-like (Drosophila), a POU domain class 5 transcription factor 1 (POU5F1) pseudogene and a CpG island, complete sequence Length = 166288 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 13627 attgtcaagtacaagacagctttctactccttctacct 13664
>gb|BC010004.2| Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:15352 IMAGE:4132071), complete cds Length = 1345 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 792 attgtcaagtacaagacagctttctactccttctacct 829
>emb|CR858871.1| Pongo pygmaeus mRNA; cDNA DKFZp469H2110 (from clone DKFZp469H2110) Length = 1395 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 846 attgtcaagtacaagacagctttctactccttctacct 883
>emb|CR625993.1| full-length cDNA clone CS0DA004YP09 of Neuroblastoma of Homo sapiens (human) Length = 1111 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 610 attgtcaagtacaagacagctttctactccttctacct 647
>dbj|AK125510.1| Homo sapiens cDNA FLJ43522 fis, clone PLACE5000260 Length = 3475 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 1466 attgtcaagtacaagacagctttctactccttctacct 1429
>emb|CR599124.1| full-length cDNA clone CS0DI030YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1330 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 828 attgtcaagtacaagacagctttctactccttctacct 865
>emb|CR598280.1| full-length cDNA clone CS0DC021YB09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1456 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 933 attgtcaagtacaagacagctttctactccttctacct 970
>emb|CR596980.1| full-length cDNA clone CS0DB007YL18 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1198 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 694 attgtcaagtacaagacagctttctactccttctacct 731
>emb|CR590457.1| full-length cDNA clone CS0DE014YE20 of Placenta of Homo sapiens (human) Length = 1178 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 664 attgtcaagtacaagacagctttctactccttctacct 701
>ref|NM_001015867.1| Xenopus tropicalis MGC108224 protein (MGC108224), mRNA Length = 2147 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||||| | | ||| ||||||||||| Sbjct: 650 attgtcaagtacaagacggcgttctattccttctacct 687
>gb|BC090384.1| Xenopus tropicalis MGC108224 protein, mRNA (cDNA clone MGC:108224 IMAGE:7016997), complete cds Length = 2147 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||||| | | ||| ||||||||||| Sbjct: 650 attgtcaagtacaagacggcgttctattccttctacct 687
>gb|AC093132.2| Papio anubis clone RP41-51M7, complete sequence Length = 167185 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 143750 attgtcaagtacaagacagctttctactccttctacct 143713
>dbj|D14697.1|HUMORF14 Homo sapiens KIAA1293 mRNA, partial cds Length = 1430 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 898 attgtcaagtacaagacagctttctactccttctacct 935
>dbj|AK099451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H18, full insert sequence Length = 1079 Score = 44.1 bits (22), Expect = 0.53 Identities = 94/118 (79%) Strand = Plus / Plus Query: 330 ttgagatgggagtctactttcagatacaggatgactacctggattgcttcggtgaccctc 389 |||||||||| || |||||||| | |||||||| || ||||| || || ||||| || Sbjct: 561 ttgagatgggtgtttactttcaaagccaggatgattatctggactgttttggtgaaccag 620 Query: 390 aagttattggcaaggttggaacagacatagaagactacaagtgctcctggctaattgt 447 || ||||||||||| | |||| ||||| ||||| | |||||| || |||||| |||| Sbjct: 621 aaattattggcaagataggaagtgacattgaagatttcaagtgttcttggctatttgt 678
>gb|AY461811.1| Taxus x media farnesyl diphosphate synthase mRNA, complete cds Length = 1464 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Plus Query: 354 tacaggatgactacctggattgcttcggtgaccctcaagttattgg 399 |||| ||||| || || |||||||| ||||| |||||||||||||| Sbjct: 810 tacaagatgattatctcgattgctttggtgatcctcaagttattgg 855
>gb|J05262.1|HUMFAPS Human farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1148 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 592 attgtcaagtacaagacagctttctactccttctacct 629
>gb|M29863.1|HUMFAPYSY Human farnesyl pyrophosphate synthetase mRNA (hpt807), 3' end Length = 1098 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacct 258 ||||||||||||||||| | | ||||||||||||||| Sbjct: 566 attgtcaagtacaagacagctttctactccttctacct 603
>dbj|AB053487.1| Humulus lupulus fpps mRNA for farnesyl pyrophophate synthase, complete cds Length = 1029 Score = 44.1 bits (22), Expect = 0.53 Identities = 67/82 (81%) Strand = Plus / Plus Query: 354 tacaggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacag 413 ||||||||||||| ||||||| || || |||| | || ||||||||| |||| |||| Sbjct: 689 tacaggatgactatttggattgttttggccacccagatgtaattggcaagattggtacag 748 Query: 414 acatagaagactacaagtgctc 435 | || ||||||| ||||||||| Sbjct: 749 atattgaagacttcaagtgctc 770
>gb|BC085702.1| Rattus norvegicus cDNA clone MGC:93187 IMAGE:7189201, complete cds Length = 2120 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cagatgctggacctcatcacc 166 ||||||||||||||||||||| Sbjct: 740 cagatgctggacctcatcacc 760
>ref|NM_138519.1| Rattus norvegicus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cagatgctggacctcatcacc 166 ||||||||||||||||||||| Sbjct: 746 cagatgctggacctcatcacc 766
>gb|AC146034.4| Pan troglodytes BAC clone RP43-16G9 from 7, complete sequence Length = 156208 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 47123 ttgtcaagtacaagacagctttctactccttctacct 47087
>gb|BC050292.1| Homo sapiens MGC44478, mRNA (cDNA clone MGC:44478 IMAGE:5298330), complete cds Length = 3725 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 3157 ttgtcaagtacaagacagctttctactccttctacct 3193
>ref|XR_002582.1| PREDICTED: Mus musculus similar to farnesyl diphosphate synthetase (LOC544723), mRNA Length = 1113 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 ||||||||||||||||| | | |||||| ||||||||||| Sbjct: 550 attgtcaagtacaagacagctttctactctttctacctgcc 590
>gb|AC147546.1| Rattus norvegicus chromosome 1 clone RP32-323A19 map q33, complete sequence Length = 118946 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 cagatgctggacctcatcacc 166 ||||||||||||||||||||| Sbjct: 82681 cagatgctggacctcatcacc 82661
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 ||||||||||||||||| | | |||||| ||||||||||| Sbjct: 33686 attgtcaagtacaagacagctttctactctttctacctgcc 33726
>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence Length = 99227 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 42492 ttgtcaagtacaagacagctttctactccttctacct 42456
>ref|XM_503599.1| Yarrowia lipolytica CLIB122, YALI0E05753g predicted mRNA Length = 1035 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 tactactccttctacctgccggttg 266 |||||||||||||||||||| |||| Sbjct: 574 tactactccttctacctgcccgttg 598
>ref|XR_001108.1| PREDICTED: Homo sapiens MGC44478 (LOC619190), misc RNA Length = 4407 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 3859 ttgtcaagtacaagacagctttctactccttctacct 3895
>ref|XR_001070.1| PREDICTED: Homo sapiens MGC44478 (LOC619190), misc RNA Length = 4407 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 3859 ttgtcaagtacaagacagctttctactccttctacct 3895
>ref|XM_935690.1| PREDICTED: Homo sapiens similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (LOC641786), mRNA Length = 4405 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 3857 ttgtcaagtacaagacagctttctactccttctacct 3893
>ref|XM_499334.2| PREDICTED: Homo sapiens similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (LOC441261), mRNA Length = 4405 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 3857 ttgtcaagtacaagacagctttctactccttctacct 3893
>gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, complete sequence Length = 149605 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 30614 ttgtcaagtacaagacagctttctactccttctacct 30650
>gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, complete sequence Length = 185281 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cctcatcaccacccacaccgg 177 ||||||||||||||||||||| Sbjct: 138813 cctcatcaccacccacaccgg 138793
>gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, complete sequence Length = 176184 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 cctcatcaccacccacaccgg 177 ||||||||||||||||||||| Sbjct: 97940 cctcatcaccacccacaccgg 97960
>gb|AC079462.2|AC079462 Homo sapiens X PAC GS1-554N22 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 77050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ccacgtccaggccatcatcaa 66 ||||||||||||||||||||| Sbjct: 24750 ccacgtccaggccatcatcaa 24770
>gb|AF245040.1|AF245040 Rattus norvegicus substrate binding subunit of type II 5'-deiodinase D2p29 mRNA, complete cds Length = 3262 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cagatgctggacctcatcacc 166 ||||||||||||||||||||| Sbjct: 746 cagatgctggacctcatcacc 766
>ref|XM_579647.1| PREDICTED: Rattus norvegicus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA Length = 3241 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cagatgctggacctcatcacc 166 ||||||||||||||||||||| Sbjct: 745 cagatgctggacctcatcacc 765
>gb|AC093540.3| Pan troglodytes clone RP43-84M6, complete sequence Length = 171092 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 222 ttgtcaagtacaagacgtcctactactccttctacct 258 |||||||||||||||| | | ||||||||||||||| Sbjct: 108170 ttgtcaagtacaagacagctttctactccttctacct 108134
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 ||||||||||||||||| | | |||||| ||||||||||| Sbjct: 11031 attgtcaagtacaagacagctttctactctttctacctgcc 10991
>emb|CT574568.2| Pan troglodytes chromosome X clone PTB-081L12 map Xq28, complete sequence Length = 199100 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ccacgtccaggccatcatcaa 66 ||||||||||||||||||||| Sbjct: 192856 ccacgtccaggccatcatcaa 192836
>emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chromosome 2, complete sequence Length = 142422 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 534 tgaagaatgtttataaggagc 554 ||||||||||||||||||||| Sbjct: 105821 tgaagaatgtttataaggagc 105841
>gb|AY609787.1| Sus scrofa clone Clu_31013.scr.msk.p1.Contig2, mRNA sequence Length = 1583 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 221 attgtcaagtacaagacgtcctactactccttctacctgcc 261 ||||||||||||||||| | | |||||| ||||||||||| Sbjct: 1035 attgtcaagtacaagacagctttctactctttctacctgcc 1075
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 tactactccttctacctgccggttg 266 |||||||||||||||||||| |||| Sbjct: 641764 tactactccttctacctgcccgttg 641740
>gb|U40455.1|HSU40455 Human chromosome X cosmid, clones 196B12, 9H11 and 43H9, repeat units and sequence tagged sites Length = 106000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ccacgtccaggccatcatcaa 66 ||||||||||||||||||||| Sbjct: 22910 ccacgtccaggccatcatcaa 22930
>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 880 atactatacgagaactatgg 899 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 791 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 834
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA, complete cds Length = 1278 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 867 atactatacgagaactatgg 886 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 778 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 821
>ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Ozsa8160 predicted mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccacccacaccggcgccaag 184 |||||||||||||||||||| Sbjct: 299 ccacccacaccggcgccaag 318
>ref|XM_521521.1| PREDICTED: Pan troglodytes similar to retinoic acid induced 17; zinc finger-containing, Miz1, PIAS-like protein on chromosome 10; PIAS-like protein hZimp10 (LOC466119), mRNA Length = 7119 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 3821 ttcatggagctcatggagct 3802
>gb|BC058646.1| Mus musculus retinoic acid induced 17, mRNA (cDNA clone MGC:76345 IMAGE:6405777), complete cds Length = 5403 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 931 ttcatggagctcatggagct 912
>ref|NM_183208.2| Mus musculus retinoic acid induced 17 (Rai17), mRNA Length = 5397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 906 ttcatggagctcatggagct 887
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tgcgataaacgacggtgtgc 35 |||||||||||||||||||| Sbjct: 2501887 tgcgataaacgacggtgtgc 2501868
>ref|XM_659032.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6520.2), mRNA Length = 936 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aaggagcttgatcttcagga 567 |||||||||||||||||||| Sbjct: 895 aaggagcttgatcttcagga 914
>ref|NM_020338.2| Homo sapiens retinoic acid induced 17 (RAI17), mRNA Length = 7041 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 477 ttcatggagctcatggagct 458
>gb|BC007288.1| Homo sapiens retinoic acid induced 17, mRNA (cDNA clone IMAGE:3347864), containing frame-shift errors Length = 2175 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 979 ttcatggagctcatggagct 960
>gb|AY235683.1| Homo sapiens PIAS-like protein hZimp10 mRNA, complete cds Length = 7040 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 476 ttcatggagctcatggagct 457
>gb|AC104373.4| Homo sapiens chromosome 8, clone RP11-1144P22, complete sequence Length = 89086 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gctgaaaaatgtactgattg 332 |||||||||||||||||||| Sbjct: 82106 gctgaaaaatgtactgattg 82125
>ref|XM_757888.1| Theileria parva strain Muguga chromosome 3 farnesyl pyrophosphate synthetase (TP03_0857) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 aagaatgtttataaggagct 555 |||||||||||||||||||| Sbjct: 919 aagaatgtttataaggagct 938
>ref|XM_718878.1| Plasmodium yoelii yoelii str. 17XNL chloroquine resistance marker protein (PY03769) partial mRNA Length = 8367 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gttggaacagacatagaaga 423 |||||||||||||||||||| Sbjct: 16 gttggaacagacatagaaga 35
>gb|AY123429.1|AY123426S04 Papio anubis anubis neurofibromatosis type 2 region, section 4; and merlin (NF2) gene, exons 2 through 16 and complete cds Length = 100801 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 tcgagctgaaaaatgtactgattg 332 ||||||||||| |||||||||||| Sbjct: 2239 tcgagctgaaagatgtactgattg 2216
>emb|AL391665.28| Human DNA sequence from clone RP11-519K18 on chromosome 10 Contains the 3' end of the RAI17 gene for retinoic acid induced 17, the 5' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F) and two CpG islands, complete sequence Length = 159866 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 84703 ttcatggagctcatggagct 84684
>emb|AL035443.4|HS137H15 Human DNA sequence from clone RP1-137H15 on chromosome Xq26.2-27.2 Contains a novel gene, the ZIC3 gene for Zic family member 3 heterotaxy (odd-paired homolog, Drosophila) and four CpG islands, complete sequence Length = 109339 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ggtgtgctcctgaaatgcca 48 |||||||||||||||||||| Sbjct: 53431 ggtgtgctcctgaaatgcca 53412
>gb|AY149028.1| Plasmodium chabaudi chabaudi strain AS clone YAC101, complete sequence Length = 80019 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gctgaaaaatgtactgattg 332 |||||||||||||||||||| Sbjct: 7886 gctgaaaaatgtactgattg 7867
>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1060 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 820 atactatacgagaactatgg 839 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 731 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 774
>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 866 atactatacgagaactatgg 885 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 777 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 820
>emb|BX571662.1| Wolinella succinogenes, complete genome; segment 6/7 Length = 349859 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 acttcatggagctcatggag 109 |||||||||||||||||||| Sbjct: 105506 acttcatggagctcatggag 105487
>emb|AJ496299.1|MCI496299 Mucor circinelloides f. lusitanicus isoA gene for farnesyl pyrophosphate synthase, exons 1-6 Length = 1963 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 220 cattgtcaagtacaagacgtcctactactccttcta 255 |||||||| |||||||| |||||||||||||||| Sbjct: 1133 cattgtcatctacaagaccgcctactactccttcta 1168
>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence Length = 170668 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gctgaaaaatgtactgattg 332 |||||||||||||||||||| Sbjct: 26616 gctgaaaaatgtactgattg 26635
>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence Length = 165662 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gagatgggagtctactttca 351 |||||||||||||||||||| Sbjct: 104403 gagatgggagtctactttca 104384
>emb|X99624.2|ENLYSFGEN Emericella nidulans lysF gene for homoaconitase (exon 1-2) Length = 3444 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 aaggagcttgatcttcagga 567 |||||||||||||||||||| Sbjct: 310 aaggagcttgatcttcagga 329
>gb|DQ087959.1| Panax ginseng farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 8.3 Identities = 68/84 (80%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 |||||||| || ||||||||||| |||| || | || ||||| ||| |||| ||||| Sbjct: 800 caggatgattatctggattgctttggtgcaccagaggtgattgggaagattggcacagat 859 Query: 416 atagaagactacaagtgctcctgg 439 || ||||| | ||||||||||||| Sbjct: 860 attgaagatttcaagtgctcctgg 883
>dbj|AK054366.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330020C23 product:hypothetical Alanine-rich region/Type I antifreeze protein containing protein, full insert sequence Length = 3230 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 907 ttcatggagctcatggagct 888
>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1198 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 825 atactatacgagaactatgg 844 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 736 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 779
>emb|BX826432.1|CNS0A41B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 565 atactatacgagaactatgg 584 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 476 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 519
>gb|BC065120.1| Mus musculus retinoic acid induced 17, mRNA (cDNA clone MGC:86031 IMAGE:6856060), complete cds Length = 5397 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 906 ttcatggagctcatggagct 887
>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence Length = 174927 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 aactatggcaagtcttcccc 516 |||||||||||||||||||| Sbjct: 79519 aactatggcaagtcttcccc 79538
>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence Length = 200292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gagatgggagtctactttca 351 |||||||||||||||||||| Sbjct: 26146 gagatgggagtctactttca 26127
>gb|AF112881.1|AF112881 Artemisia annua farnesyl diphosphate synthase mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 395 attggcaaggttggaacagacatagaagactacaagtgctcctggctaattgtccaggct 454 ||||| ||| ||||||| || || ||||||| |||||||||||| || ||||| |||| Sbjct: 806 attggaaagattggaactgatattgaagactttaagtgctcctggttagttgtcaaggca 865 Query: 455 atggaact 462 ||||||| Sbjct: 866 ttggaact 873
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccacccacaccggcgccaag 184 |||||||||||||||||||| Sbjct: 18391 ccacccacaccggcgccaag 18372
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccacccacaccggcgccaag 184 |||||||||||||||||||| Sbjct: 167062 ccacccacaccggcgccaag 167043
>dbj|AK024490.1| Homo sapiens mRNA for FLJ00092 protein, partial cds Length = 4259 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 137 ttcatggagctcatggagct 118
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 380 ggtgaccctcaagttattggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| || ||||||||||| | || || ||||| ||||| ||||| ||||| ||| Sbjct: 959 ggtgaccccaaatttattggcaagatcgggactgacattgaagattacaaatgctcttgg 1018 Query: 440 ctaattgt 447 ||| |||| Sbjct: 1019 ctagttgt 1026
>gb|AC154455.2| Mus musculus BAC clone RP23-185H13 from 14, complete sequence Length = 215308 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 16716 ttcatggagctcatggagct 16735
>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 380 ggtgaccctcaagttattggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| || ||||||||||| | || || ||||| ||||| ||||| ||||| ||| Sbjct: 1031 ggtgaccccaaatttattggcaagatcgggactgacattgaagattacaaatgctcttgg 1090 Query: 440 ctaattgt 447 ||| |||| Sbjct: 1091 ctagttgt 1098
>gb|AC154759.2| Mus musculus BAC clone RP24-408G4 from 14, complete sequence Length = 145942 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 65940 ttcatggagctcatggagct 65921
>gb|AF136602.1|AF136602 Artemisia annua farnesyl diphosphate synthase (fps2) mRNA, complete cds Length = 1333 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 395 attggcaaggttggaacagacatagaagactacaagtgctcctggctaattgtccaggct 454 ||||| ||| ||||||| || || ||||||| |||||||||||| || ||||| |||| Sbjct: 806 attggaaagattggaactgatattgaagactttaagtgctcctggttagttgtcaaggca 865 Query: 455 atggaact 462 ||||||| Sbjct: 866 ttggaact 873
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggacctcatcaccacccaca 173 |||||||||||||||||||| Sbjct: 1570244 ggacctcatcaccacccaca 1570225
>dbj|AB033050.2| Homo sapiens mRNA for KIAA1224 protein, partial cds Length = 4860 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcatggagctcatggagct 111 |||||||||||||||||||| Sbjct: 198 ttcatggagctcatggagct 179
>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 atactatacgagaactatgg 504 |||||||||||||||||||| Sbjct: 866 atactatacgagaactatgg 885 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 396 ttggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| | || |||||||||||||| | ||| ||||||||| Sbjct: 777 ttggcaagatagggacagacatagaagatttcaaatgctcctgg 820
>gb|AY162472.1| Eucommia ulmoides farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 |||||||| ||||||||||| || ||||| ||| | || ||||| ||| ||||| |||| Sbjct: 772 caggatgattacctggattgttttggtgatcctgaggtgattggaaagattggatcagat 831 Query: 416 atagaaga 423 || ||||| Sbjct: 832 attgaaga 839
>dbj|AB052680.1| Eucommia ulmoides EUFPS1 mRNA for putative FPP synthase 1, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 |||||||| ||||||||||| || ||||| ||| | || ||||| ||| ||||| |||| Sbjct: 779 caggatgattacctggattgttttggtgatcctgaggtgattggaaagattggatcagat 838 Query: 416 atagaaga 423 || ||||| Sbjct: 839 attgaaga 846
>dbj|AB021979.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl diphosphate synthase, partial cds Length = 725 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 380 ggtgaccctcaagttattggcaaggttggaacagacatagaagactacaagtgctcctgg 439 |||||||| || ||||||||||| | || || ||||| ||||| ||||| ||||| ||| Sbjct: 248 ggtgaccccaaatttattggcaagatcgggactgacattgaagattacaaatgctcttgg 307 Query: 440 ctaattgt 447 ||| |||| Sbjct: 308 ctagttgt 315
>dbj|AB041626.2| Eucommia ulmoides EUFPPS1 mRNA for putative FPP synthase 1, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 356 caggatgactacctggattgcttcggtgaccctcaagttattggcaaggttggaacagac 415 |||||||| ||||||||||| || ||||| ||| | || ||||| ||| ||||| |||| Sbjct: 783 caggatgattacctggattgttttggtgatcctgaggtgattggaaagattggatcagat 842 Query: 416 atagaaga 423 || ||||| Sbjct: 843 attgaaga 850 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,674,176 Number of Sequences: 3902068 Number of extensions: 4674176 Number of successful extensions: 78314 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 77975 Number of HSP's gapped (non-prelim): 340 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
