ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20d17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 434 e-119
2ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 157 2e-35
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-35
4dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-35
5dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-35
6dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
7dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
10gb|AY108897.1| Zea mays PCO080076 mRNA sequence 127 2e-26
11ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA... 62 8e-07
12ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 62 8e-07
13emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 62 8e-07
14emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 62 8e-07
15gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 62 8e-07
16gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 62 8e-07
17gb|AY322552.1| Triticum aestivum putative fatty acid desaturase ... 52 8e-04
18gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se... 50 0.003
19gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, com... 46 0.049
20gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 46 0.049
21gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing... 42 0.77
22dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 0.77
23gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, com... 40 3.0
24gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 3.0
25ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 3.0
26emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M... 40 3.0
27gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 3.0
28gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 3.0
29gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306... 40 3.0
30dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
31emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 40 3.0
32dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 3.0
33gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 40 3.0 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase
            (Xantha-l) gene, complete cds
          Length = 2097

 Score =  434 bits (219), Expect = e-119
 Identities = 226/227 (99%), Gaps = 1/227 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    catttctataggagagtcca-cgacttgcccctggtgaagaacctgaagagggttcctct 60
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 catttctataggagagtccaacgacttgcccctggtgaagaacctgaagagggttcctct 1863

                                                                        
Query: 61   tattgcccaactagtgtctgagatcatcgctgcgtacctcatgcccccaatcgagtctgg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 tattgcccaactagtgtctgagatcatcgctgcgtacctcatgcccccaatcgagtctgg 1923

                                                                        
Query: 121  ctccgttgattttgccgaatttgagcccaagcttgtctactgaatttgtcgaaaaaggat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 ctccgttgattttgccgaatttgagcccaagcttgtctactgaatttgtcgaaaaaggat 1983

                                                           
Query: 181  tcatctctgcctatctttacaaacataatgatgcatcatgctcctcg 227
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 tcatctctgcctatctttacaaacataatgatgcatcatgctcctcg 2030
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>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                        
Query: 29   cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
            |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 1093 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 1152

                                                                        
Query: 89   gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 1153 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 1212

                           
Query: 149  aagcttgtctactga 163
             ||||||||||||||
Sbjct: 1213 cagcttgtctactga 1227
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                           
Query: 29      cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
               |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 9875106 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 9875165

                                                                           
Query: 89      gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
               ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 9875166 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 9875225

                              
Query: 149     aagcttgtctactga 163
                ||||||||||||||
Sbjct: 9875226 cagcttgtctactga 9875240
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                          
Query: 29     cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
              |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 139356 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 139415

                                                                          
Query: 89     gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
              ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 139416 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 139475

                             
Query: 149    aagcttgtctactga 163
               ||||||||||||||
Sbjct: 139476 cagcttgtctactga 139490
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                         
Query: 29    cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
             |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 10872 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 10931

                                                                         
Query: 89    gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
             ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 10932 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 10991

                            
Query: 149   aagcttgtctactga 163
              ||||||||||||||
Sbjct: 10992 cagcttgtctactga 11006
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>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
            insert sequence
          Length = 1691

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                        
Query: 29   cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
            |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 1141 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 1200

                                                                        
Query: 89   gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 1201 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 1260

                           
Query: 149  aagcttgtctactga 163
             ||||||||||||||
Sbjct: 1261 cagcttgtctactga 1275
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>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full
           insert sequence
          Length = 618

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                       
Query: 29  cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
           |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 216 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 275

                                                                       
Query: 89  gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
           ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 276 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 335

                          
Query: 149 aagcttgtctactga 163
            ||||||||||||||
Sbjct: 336 cagcttgtctactga 350
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>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
            insert sequence
          Length = 1944

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                        
Query: 29   cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
            |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 1131 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 1190

                                                                        
Query: 89   gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 1191 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 1250

                           
Query: 149  aagcttgtctactga 163
             ||||||||||||||
Sbjct: 1251 cagcttgtctactga 1265
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>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
            insert sequence
          Length = 1533

 Score =  157 bits (79), Expect = 2e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                        
Query: 29   cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
            |||||||||||||||||||||||| ||||||   |||||   || |||||||||||||| 
Sbjct: 1127 cccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcatt 1186

                                                                        
Query: 89   gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
            ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||
Sbjct: 1187 gctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccc 1246

                           
Query: 149  aagcttgtctactga 163
             ||||||||||||||
Sbjct: 1247 cagcttgtctactga 1261
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>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  127 bits (64), Expect = 2e-26
 Identities = 106/120 (88%)
 Strand = Plus / Plus

                                                                        
Query: 29   cccctggtgaagaacctgaagagggttcctcttattgcccaactagtgtctgagatcatc 88
            ||||| |||||||||||||||||| |||||||| | |||   || ||||| |||||||||
Sbjct: 1132 cccctagtgaagaacctgaagaggattcctcttgtcgcctctctggtgtccgagatcatc 1191

                                                                        
Query: 89   gctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccgaatttgagccc 148
            || || |||||||||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 1192 gccgcctacctcatgccccccatcgagtctggctcggttgatttcgccgaatttgagccc 1251
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>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds
          Length = 1481

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 77   tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
            ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 1304 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 1245

                                   
Query: 137  gaatttgagcccaagcttgtcta 159
            || |||||||| || ||||||||
Sbjct: 1244 gagtttgagcctaatcttgtcta 1222
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>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103)
            mRNA, complete cds
          Length = 1602

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 77   tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
            ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 1193 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 1252

                                   
Query: 137  gaatttgagcccaagcttgtcta 159
            || |||||||| || ||||||||
Sbjct: 1253 gagtttgagcctaatcttgtcta 1275
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>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 77    tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
             ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 94106 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 94165

                                    
Query: 137   gaatttgagcccaagcttgtcta 159
             || |||||||| || ||||||||
Sbjct: 94166 gagtttgagcctaatcttgtcta 94188
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>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 77   tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
            ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 6193 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 6252

                                   
Query: 137  gaatttgagcccaagcttgtcta 159
            || |||||||| || ||||||||
Sbjct: 6253 gagtttgagcctaatcttgtcta 6275
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>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
            mRNA, complete cds
          Length = 1407

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 77   tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
            ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 1183 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 1242

                                   
Query: 137  gaatttgagcccaagcttgtcta 159
            || |||||||| || ||||||||
Sbjct: 1243 gagtttgagcctaatcttgtcta 1265
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>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 77   tctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgcc 136
            ||||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| |||
Sbjct: 1159 tctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgcc 1218

                                   
Query: 137  gaatttgagcccaagcttgtcta 159
            || |||||||| || ||||||||
Sbjct: 1219 gagtttgagcctaatcttgtcta 1241
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>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 78  ctgagatcatcgctgcgtacctcatgcccccaatcgagtctggctccgttgattttgccg 137
           |||||||| | ||||| || |||||||| ||  | ||||||||||| |||||||| ||||
Sbjct: 833 ctgagatcttggctgcttatctcatgcctcctgttgagtctggctctgttgatttcgccg 892

                     
Query: 138 aatttgagcc 147
           |||| |||||
Sbjct: 893 aattcgagcc 902
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>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence
          Length = 96930

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 101   atgcccccaatcgagtctggctccgttgattttgccgaatttgagcccaagcttgtctac 160
             ||||| |||||||||||||| || ||||||||||| || ||||| || || ||||| |||
Sbjct: 95880 atgccaccaatcgagtctggatctgttgattttgcagagtttgaaccaaaacttgtttac 95939

              
Query: 161   t 161
             |
Sbjct: 95940 t 95940
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>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence
          Length = 173716

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 30    ccctggtgaagaacctgaagagg 52
             |||||||||||||||||||||||
Sbjct: 64551 ccctggtgaagaacctgaagagg 64529
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>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 30    ccctggtgaagaacctgaagagg 52
             |||||||||||||||||||||||
Sbjct: 21013 ccctggtgaagaacctgaagagg 21035
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>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds
          Length = 5083

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 35   gtgaagaacctgaagagggttcctcttat 63
            ||||||||| ||||||||||||| |||||
Sbjct: 4613 gtgaagaacttgaagagggttccacttat 4641
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 137    gaatttgagcccaagcttgtctact 161
              ||||||||| |||||||||||||||
Sbjct: 149076 gaatttgagaccaagcttgtctact 149100
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>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence
          Length = 165405

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ttacaaacataatgatgcat 216
              ||||||||||||||||||||
Sbjct: 100890 ttacaaacataatgatgcat 100909
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>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete
            sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  ttacaaacataatgatgcat 216
            ||||||||||||||||||||
Sbjct: 1385 ttacaaacataatgatgcat 1404
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>ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00831.1)
            partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 43   cctgaagagggttcctcttattgc 66
            |||||||| |||||||||||||||
Sbjct: 2058 cctgaagaaggttcctcttattgc 2081
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>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3
             Contains the 3' end of the SUMO-1-specific protease
             (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI
             (DFNA22 KIAA0389) and one CpG island, complete sequence
          Length = 121764

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   cataatgatgcatcatgctc 223
             ||||||||||||||||||||
Sbjct: 43585 cataatgatgcatcatgctc 43566
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>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    tcatctctgcctatctttac 200
              ||||||||||||||||||||
Sbjct: 141277 tcatctctgcctatctttac 141296
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>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   catctctgcctatctttaca 201
             ||||||||||||||||||||
Sbjct: 95520 catctctgcctatctttaca 95539
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>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete
             sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   atttgagcccaagcttgtct 158
             ||||||||||||||||||||
Sbjct: 64025 atttgagcccaagcttgtct 64006
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>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 ctactgaatttgtcgaaaaa 176
           ||||||||||||||||||||
Sbjct: 612 ctactgaatttgtcgaaaaa 631
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>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   caaacataatgatgcatcat 219
             ||||||||||||||||||||
Sbjct: 72872 caaacataatgatgcatcat 72853
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     ctccgttgattttgccgaat 140
               ||||||||||||||||||||
Sbjct: 3368442 ctccgttgattttgccgaat 3368423
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>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tcatctctgcctatctttac 200
              ||||||||||||||||||||
Sbjct: 162688 tcatctctgcctatctttac 162669


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,624,729
Number of Sequences: 3902068
Number of extensions: 1624729
Number of successful extensions: 29713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29638
Number of HSP's gapped (non-prelim): 65
length of query: 237
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 215
effective length of database: 17,147,199,772
effective search space: 3686647950980
effective search space used: 3686647950980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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