ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal20d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC130335.7| Homo sapiens chromosome 8, clone RP13-944D21, com... 42 0.50
2gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, comp... 42 0.50
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.50
4gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 0.50
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.50
6emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 42 0.50
7ref|XM_516200.1| PREDICTED: Pan troglodytes similar to axonal tr... 40 2.0
8ref|NM_004321.4| Homo sapiens kinesin family member 1A (KIF1A), ... 40 2.0
9gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 2.0
10gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 2.0
11emb|X90840.1|HAAXTRSYV H.sapiens mRNA for axonal transporter of ... 40 2.0
12emb|BX537556.1|HSM806163 Homo sapiens mRNA; cDNA DKFZp686N1746 (... 40 2.0
13gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, comple... 40 2.0
14gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complet... 40 2.0
15gb|L79946.1|HUMHUNC Homo sapiens clone 25553 unknown (HUNC-104) ... 40 2.0
16emb|BX649015.1|HSM809166 Homo sapiens mRNA; cDNA DKFZp686I2094 (... 40 2.0
17dbj|AK130880.1| Homo sapiens cDNA FLJ27370 fis, clone UBA03786, ... 40 2.0
18gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 2.0
19gb|BC111799.1| Homo sapiens kinesin family member 1A, mRNA (cDNA... 40 2.0
20gb|BC111780.1| Homo sapiens kinesin family member 1A, mRNA (cDNA... 40 2.0
21gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 2.0
22gb|AF052089.1|AF052089 Homo sapiens clone 23630 and 23737 mRNA s... 40 2.0
23gb|AF038173.1|AF038173 Homo sapiens clone 23723 axonal transport... 40 2.0
24dbj|AB209138.1| Homo sapiens mRNA for axonal transport of synapt... 40 2.0
25gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 38 7.8
26gb|AF337647.3| Xanthomonas oryzae pv. oryzae putative cystathion... 38 7.8
27ref|XM_423851.1| PREDICTED: Gallus gallus similar to MYG1 protei... 38 7.8
28ref|XM_366974.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 38 7.8
29gb|AC026866.8| Homo sapiens BAC clone RP11-420P20 from 7, comple... 38 7.8
30gb|AC073644.10| Homo sapiens BAC clone RP11-519M4 from 7, comple... 38 7.8
31gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 7.8
32emb|CT009637.4| Mouse DNA sequence from clone RP23-131G16 on chr... 38 7.8
33ref|XM_532215.2| PREDICTED: Canis familiaris similar to pad-1-li... 38 7.8
34gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete... 38 7.8
35gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 38 7.8
36emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chro... 38 7.8
37emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chr... 38 7.8
38dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 38 7.8
39gb|AE012009.1| Xanthomonas axonopodis pv. citri str. 306, secti... 38 7.8
40gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, comp... 38 7.8
41gb|AE012159.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 7.8
42gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynt... 38 7.8
43emb|CR524116.1| Gallus gallus finished cDNA, clone ChEST645f16 38 7.8
44gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 7.8
45ref|NM_015018.2| Homo sapiens dopey family member 1 (DOPEY1), mRNA 38 7.8
46gb|AC079679.4|AC079679 Arabidopsis thaliana chromosome 1 BAC T6B... 38 7.8
47gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 38 7.8
48emb|BX648667.1|HSM808818 Homo sapiens mRNA; cDNA DKFZp686E0245 (... 38 7.8
49gb|AC005378.2|AC005378 Homo sapiens PAC clone RP5-1137M13 from 7... 38 7.8
50emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 7.8
51gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 38 7.8
52gb|AC005332.1|AC005332 Homo sapiens chromosome 17, clone hRPK.14... 38 7.8
53emb|AJ628149.4| Micromonospora echinospora genomic region of the... 38 7.8
54dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 7.8
55gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 38 7.8 
>gb|AC130335.7| Homo sapiens chromosome 8, clone RP13-944D21, complete sequence
          Length = 121868

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    aaggagcacatcttcagcctg 78
             |||||||||||||||||||||
Sbjct: 24265 aaggagcacatcttcagcctg 24285
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>gb|AC105180.8| Homo sapiens chromosome 8, clone RP11-345J1, complete sequence
          Length = 174617

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 58    aaggagcacatcttcagcctg 78
             |||||||||||||||||||||
Sbjct: 51854 aaggagcacatcttcagcctg 51834
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 87/109 (79%)
 Strand = Plus / Minus

                                                                            
Query: 44       agccggtagcgatgaaggagcacatcttcagcctggccgacggcaccatcggcatgatag 103
                ||||||| ||| || | ||||||||| | |||||  ||||||| | |||||||| | | |
Sbjct: 19891373 agccggtggcgttggacgagcacatcctgagcctctccgacgggatcatcggcacggtgg 19891314

                                                                 
Query: 104      ggttcggcgacatgtacaacagcgacaagttcccacaccacaagaactt 152
                 ||||||| |||| |||  ||||||||||||| | ||  ||||||||||
Sbjct: 19891313 cgttcggcaacatctacggcagcgacaagttctcccagaacaagaactt 19891265
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 74      gcctggccgacggcaccatcg 94
               |||||||||||||||||||||
Sbjct: 2723320 gcctggccgacggcaccatcg 2723300
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 87/109 (79%)
 Strand = Plus / Minus

                                                                            
Query: 44       agccggtagcgatgaaggagcacatcttcagcctggccgacggcaccatcggcatgatag 103
                ||||||| ||| || | ||||||||| | |||||  ||||||| | |||||||| | | |
Sbjct: 19817587 agccggtggcgttggacgagcacatcctgagcctctccgacgggatcatcggcacggtgg 19817528

                                                                 
Query: 104      ggttcggcgacatgtacaacagcgacaagttcccacaccacaagaactt 152
                 ||||||| |||| |||  ||||||||||||| | ||  ||||||||||
Sbjct: 19817527 cgttcggcaacatctacggcagcgacaagttctcccagaacaagaactt 19817479
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>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 87/109 (79%)
 Strand = Plus / Plus

                                                                          
Query: 44     agccggtagcgatgaaggagcacatcttcagcctggccgacggcaccatcggcatgatag 103
              ||||||| ||| || | ||||||||| | |||||  ||||||| | |||||||| | | |
Sbjct: 135887 agccggtggcgttggacgagcacatcctgagcctctccgacgggatcatcggcacggtgg 135946

                                                               
Query: 104    ggttcggcgacatgtacaacagcgacaagttcccacaccacaagaactt 152
               ||||||| |||| |||  ||||||||||||| | ||  ||||||||||
Sbjct: 135947 cgttcggcaacatctacggcagcgacaagttctcccagaacaagaactt 135995
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>ref|XM_516200.1| PREDICTED: Pan troglodytes similar to axonal transport of synaptic
            vesicles; kinesin, heavy chain, member 1A, homolog of
            mouse (LOC460072), mRNA
          Length = 7749

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 7529 acatgtacaacagcgacaag 7548
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>ref|NM_004321.4| Homo sapiens kinesin family member 1A (KIF1A), mRNA
          Length = 8843

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 4960 acatgtacaacagcgacaag 4979
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     tcagcctggccgacggcacc 90
              ||||||||||||||||||||
Sbjct: 317594 tcagcctggccgacggcacc 317575
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      ccggagagccggtagcgatg 57
               ||||||||||||||||||||
Sbjct: 4723084 ccggagagccggtagcgatg 4723103
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>emb|X90840.1|HAAXTRSYV H.sapiens mRNA for axonal transporter of synaptic vesicles
          Length = 6972

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 4877 acatgtacaacagcgacaag 4896
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>emb|BX537556.1|HSM806163 Homo sapiens mRNA; cDNA DKFZp686N1746 (from clone DKFZp686N1746)
          Length = 5550

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 1676 acatgtacaacagcgacaag 1695
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>gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, complete sequence
          Length = 174221

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   acatgtacaacagcgacaag 132
             ||||||||||||||||||||
Sbjct: 88525 acatgtacaacagcgacaag 88544
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>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence
          Length = 196451

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    acatgtacaacagcgacaag 132
              ||||||||||||||||||||
Sbjct: 133468 acatgtacaacagcgacaag 133487
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>gb|L79946.1|HUMHUNC Homo sapiens clone 25553 unknown (HUNC-104) mRNA, partial cds
          Length = 1409

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 acatgtacaacagcgacaag 132
           ||||||||||||||||||||
Sbjct: 805 acatgtacaacagcgacaag 824
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>emb|BX649015.1|HSM809166 Homo sapiens mRNA; cDNA DKFZp686I2094 (from clone DKFZp686I2094)
          Length = 5257

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 1381 acatgtacaacagcgacaag 1400
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>dbj|AK130880.1| Homo sapiens cDNA FLJ27370 fis, clone UBA03786, highly similar to
            Kinesin-like protein KIF1A
          Length = 2192

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 1589 acatgtacaacagcgacaag 1608
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      ctggccgacggcaccatcgg 95
               ||||||||||||||||||||
Sbjct: 4529750 ctggccgacggcaccatcgg 4529769
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>gb|BC111799.1| Homo sapiens kinesin family member 1A, mRNA (cDNA clone MGC:133285
            IMAGE:40037561), complete cds
          Length = 5160

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 4842 acatgtacaacagcgacaag 4861
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>gb|BC111780.1| Homo sapiens kinesin family member 1A, mRNA (cDNA clone MGC:133286
            IMAGE:40037563), complete cds
          Length = 5160

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 4842 acatgtacaacagcgacaag 4861
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      cttcagcctggccgacggca 88
               ||||||||||||||||||||
Sbjct: 3844026 cttcagcctggccgacggca 3844007
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>gb|AF052089.1|AF052089 Homo sapiens clone 23630 and 23737 mRNA sequences
          Length = 1649

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 1001 acatgtacaacagcgacaag 1020
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>gb|AF038173.1|AF038173 Homo sapiens clone 23723 axonal transporter of synaptic vesicles
            (ATSV) mRNA, partial cds
          Length = 1649

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 1001 acatgtacaacagcgacaag 1020
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>dbj|AB209138.1| Homo sapiens mRNA for axonal transport of synaptic vesicles variant
            protein
          Length = 5971

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  acatgtacaacagcgacaag 132
            ||||||||||||||||||||
Sbjct: 2173 acatgtacaacagcgacaag 2192
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 80      ccgacggcaccatcggcat 98
               |||||||||||||||||||
Sbjct: 1611309 ccgacggcaccatcggcat 1611327
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>gb|AF337647.3| Xanthomonas oryzae pv. oryzae putative cystathionine gamma-lyase (metB)
             gene, partial cds; putative sugar nucleotide
             epimerase/dehydratase (wxoA), putative glycosyl
             transferase (wxoB), putative glycosyl transferase (wxoC),
             putative o-antigen acetylase (wxoD), putative ISXo8
             transposase, putative IS1113 transposase (tnpX1),
             truncated putative transposase, putative ATP binding
             protein (wzt), and putative ABC transporter system
             integral membrane protein (wzm) genes, complete cds; and
             putative electron transferring flavoprotein alpha subunit
             (etfA) gene, partial cds
          Length = 13187

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 62    agcacatcttcagcctggccgac 84
             ||||||||| |||||||||||||
Sbjct: 13158 agcacatctacagcctggccgac 13136
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>ref|XM_423851.1| PREDICTED: Gallus gallus similar to MYG1 protein (LOC426187), mRNA
          Length = 1392

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 57  gaaggagcacatcttcagcctgg 79
           |||||||||| ||||||||||||
Sbjct: 798 gaaggagcacctcttcagcctgg 820
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>ref|XM_366974.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
          (MG03050.4) partial mRNA
          Length = 1080

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 19 gataccttgagcggcttgg 37
          |||||||||||||||||||
Sbjct: 68 gataccttgagcggcttgg 50
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>gb|AC026866.8| Homo sapiens BAC clone RP11-420P20 from 7, complete sequence
          Length = 179438

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 133    ttcccacaccacaagaact 151
              |||||||||||||||||||
Sbjct: 144491 ttcccacaccacaagaact 144473
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>gb|AC073644.10| Homo sapiens BAC clone RP11-519M4 from 7, complete sequence
          Length = 174359

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gcaggtggagaaactgatg 19
              |||||||||||||||||||
Sbjct: 137810 gcaggtggagaaactgatg 137828
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 76      ctggccgacggcaccatcg 94
               |||||||||||||||||||
Sbjct: 2975286 ctggccgacggcaccatcg 2975268
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>emb|CT009637.4| Mouse DNA sequence from clone RP23-131G16 on chromosome 17, complete
              sequence
          Length = 222316

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      gcaggtggagaaactgatg 19
              |||||||||||||||||||
Sbjct: 185486 gcaggtggagaaactgatg 185468
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>ref|XM_532215.2| PREDICTED: Canis familiaris similar to pad-1-like isoform 1,
            transcript variant 1 (LOC474980), mRNA
          Length = 7854

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    gagaaactgatgatacctt 26
            |||||||||||||||||||
Sbjct: 1892 gagaaactgatgatacctt 1874
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>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 131    agttcccacaccacaagaacttg 153
              |||||||| ||||||||||||||
Sbjct: 186934 agttcccataccacaagaacttg 186956
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     ctggccgacggcaccatcg 94
              |||||||||||||||||||
Sbjct: 769370 ctggccgacggcaccatcg 769388
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>emb|AL669823.7| Mouse DNA sequence from clone RP23-456O1 on chromosome 11 Contains a
              novel gene and the 5' end of a novel gene, complete
              sequence
          Length = 197012

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 60     ggagcacatcttcagcctg 78
              |||||||||||||||||||
Sbjct: 133421 ggagcacatcttcagcctg 133439
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>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of
              the Ptprd gene for receptor type protein tyrosine
              phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 131    agttcccacaccacaagaacttg 153
              |||||||| ||||||||||||||
Sbjct: 144291 agttcccataccacaagaacttg 144313
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     agcacatcttcagcctggccgac 84
              ||||||||| |||||||||||||
Sbjct: 774423 agcacatctacagcctggccgac 774401
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>gb|AE012009.1| Xanthomonas axonopodis pv. citri str. 306,  section 387 of 469 of the
            complete genome
          Length = 13483

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 62   agcacatcttcagcctggccgac 84
            ||||||||| |||||||||||||
Sbjct: 1534 agcacatctacagcctggccgac 1556
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>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence
          Length = 206801

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     gcaggtggagaaactgatg 19
             |||||||||||||||||||
Sbjct: 56994 gcaggtggagaaactgatg 57012
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>gb|AE012159.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 67 of
            460 of the complete genome
          Length = 11349

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 62   agcacatcttcagcctggccgac 84
            ||||||||| |||||||||||||
Sbjct: 9816 agcacatctacagcctggccgac 9794
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>gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynthetic cluster, partial
             sequence; and putative electron-transferring flavoprotein
             beta subunit (etfS) and putative electron-transferring
             flavoprotein alpha subunit (etfL) genes, complete cds
          Length = 37753

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 62    agcacatcttcagcctggccgac 84
             ||||||||| |||||||||||||
Sbjct: 10555 agcacatctacagcctggccgac 10577
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>emb|CR524116.1| Gallus gallus finished cDNA, clone ChEST645f16
          Length = 1310

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 57  gaaggagcacatcttcagcctgg 79
           |||||||||| ||||||||||||
Sbjct: 718 gaaggagcacctcttcagcctgg 740
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 62      agcacatcttcagcctggccgac 84
               ||||||||| |||||||||||||
Sbjct: 4297029 agcacatctacagcctggccgac 4297051
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>ref|NM_015018.2| Homo sapiens dopey family member 1 (DOPEY1), mRNA
          Length = 7918

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    gagaaactgatgatacctt 26
            |||||||||||||||||||
Sbjct: 1995 gagaaactgatgatacctt 1977
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>gb|AC079679.4|AC079679 Arabidopsis thaliana chromosome 1 BAC T6B12 genomic sequence, complete
             sequence
          Length = 30734

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    gaaactgatgataccttga 28
             |||||||||||||||||||
Sbjct: 21984 gaaactgatgataccttga 21966
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      ccttgagcggcttggccgg 41
               |||||||||||||||||||
Sbjct: 2649566 ccttgagcggcttggccgg 2649548
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>emb|BX648667.1|HSM808818 Homo sapiens mRNA; cDNA DKFZp686E0245 (from clone DKFZp686E0245)
          Length = 7916

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    gagaaactgatgatacctt 26
            |||||||||||||||||||
Sbjct: 1995 gagaaactgatgatacctt 1977
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>gb|AC005378.2|AC005378 Homo sapiens PAC clone RP5-1137M13 from 7q33-q35, complete sequence
          Length = 129036

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      gcaggtggagaaactgatg 19
              |||||||||||||||||||
Sbjct: 113007 gcaggtggagaaactgatg 112989
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     ctggccgacggcaccatcg 94
              |||||||||||||||||||
Sbjct: 727879 ctggccgacggcaccatcg 727897
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     agcacatcttcagcctggccgac 84
              ||||||||| |||||||||||||
Sbjct: 806073 agcacatctacagcctggccgac 806051
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>gb|AC005332.1|AC005332 Homo sapiens chromosome 17, clone hRPK.147_L_13, complete sequence
          Length = 216631

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     caggtggagaaactgatga 20
             |||||||||||||||||||
Sbjct: 21533 caggtggagaaactgatga 21515
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>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin
             biosynthesis gene cluster, strain DSM 43036
          Length = 84222

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    cctggccgacggcaccatc 93
             |||||||||||||||||||
Sbjct: 83299 cctggccgacggcaccatc 83317
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 76      ctggccgacggcaccatcg 94
               |||||||||||||||||||
Sbjct: 2079819 ctggccgacggcaccatcg 2079801
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 78      ggccgacggcaccatcggc 96
               |||||||||||||||||||
Sbjct: 1240997 ggccgacggcaccatcggc 1240979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,102,885
Number of Sequences: 3902068
Number of extensions: 1102885
Number of successful extensions: 77567
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76401
Number of HSP's gapped (non-prelim): 1166
length of query: 162
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 140
effective length of database: 17,147,199,772
effective search space: 2400607968080
effective search space used: 2400607968080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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